CuGenDBv2

Gene ID	Chy3G058100
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Retrotransposon protein
Genome location	chrH03:11505558..11518430
RNA-Seq Expression	Chy3G058100
Synteny	Chy3G058100
Gene Ontology terms	GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR027806 - Harbinger transposase-derived nuclease domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035620.1 retrotransposon protein [Cucumis melo var. makuwa]

9.78e-141

65.22

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Query:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLG
        MDRRCFAILCHLLRT   L ST++VDVEEMVA+FLH+LAHDVKNR +QREF+RSGET+SRHFN +L+ ++R+HEELL  PQP+ N CT+ RW+ F+NCLG
Subjt:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLG

Query:  ALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQ--------------------M*FPD----LTV*RGQHYHLQE
        ALD  YIKVNV A+DR RYR RKG+VATNVL +CDTKGDFV+VLAGWE SAAD RIL+                      +P+    L   RGQ YHLQE
Subjt:  ALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQ--------------------M*FPD----LTV*RGQHYHLQE

Query:  *RGTSNAPTTTKEFFNMKHSSAHNVIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASN
         RG  NAP+T+KEFFNMKHSSA NVIERAFG+LKG WAILRGKS YP+EV  R+I+AC LLHNLIN EMTN DI ++ DE DS H TT+ ++I YIE SN
Subjt:  *RGTSNAPTTTKEFFNMKHSSAHNVIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASN

Query:  EWTQWRDALATLMFTEWLIIDQ
        EW+QWRD LA  MFTEW + +Q
Subjt:  EWTQWRDALATLMFTEWLIIDQ

KAA0038275.1 retrotransposon protein [Cucumis melo var. makuwa]

2.15e-146

70.16

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Query:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLG
        MDRRCF ILCHLLRTR +L+ST+ VDVEEMVA+FLHVLAHDVKNR++QREFVRS E V +HFN +LM +LR+H+ELLATPQPIT+ C ++RW  F+NC+G
Subjt:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLG

Query:  ALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQ--M*FPD-LTV*R----GQHYHLQE*RGTSNAPTTTKEFFNM
        ALDDMYIKVNVSA DRPRYR RKG+VATN L +CDTKGDFVF+LAGWE SAA+ R L+  +  P+ L V +    GQ YHLQE RGT NAP T KEFFNM
Subjt:  ALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQ--M*FPD-LTV*R----GQHYHLQE*RGTSNAPTTTKEFFNM

Query:  KHSSAHNVIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASNEWTQWRDALATLMFTEW
        KHSSA NVIERA GLLKGCWAILR KS YP+EV   +IMAC LLHNLIN E+T ++  +DED+ DS H TTSG++ITYIE SNEWT+WRDALA+ MFTEW
Subjt:  KHSSAHNVIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASNEWTQWRDALATLMFTEW

Query:  LIIDQ
         + +Q
Subjt:  LIIDQ

KAA0046727.1 retrotransposon protein [Cucumis melo var. makuwa]

2.79e-140

64.91

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Query:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLG
        MDRRCFAILCHLLRT   L ST++VDVEEMVA+FLH+LAHDVKNR +QREF+RSGET+SRHFN +L+ ++R+H+ELL  PQP+ N CT+ RW+ F+NCLG
Subjt:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLG

Query:  ALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQ--------------------M*FPD----LTV*RGQHYHLQE
        ALD  YIKVNV A+DR RYR RKG+VATNVL +CDTKGDFV+VLAGWE SAAD RIL+                      +P+    L   RGQ YHLQE
Subjt:  ALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQ--------------------M*FPD----LTV*RGQHYHLQE

Query:  *RGTSNAPTTTKEFFNMKHSSAHNVIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASN
         RG  NAP+T+KEFFNMKHSSA NVIERAFG+LKG WAILRGKS YP+EV  R+I+AC LLHNLIN EMTN DI ++ DE DS H TT+ ++I YIE SN
Subjt:  *RGTSNAPTTTKEFFNMKHSSAHNVIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASN

Query:  EWTQWRDALATLMFTEWLIIDQ
        EW+QWRD LA  MFTEW + +Q
Subjt:  EWTQWRDALATLMFTEWLIIDQ

KAA0065286.1 retrotransposon protein [Cucumis melo var. makuwa]

8.50e-142

65.53

Show/hide

Query:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLG
        MDRRCFAILCHLLRT   L ST++VDVEEMVA+FLH+LAHDVKNR +QREF+RSGET+SRHFN +L+ ++R+HEELL  PQP+ N CT+ RW+ F+NCLG
Subjt:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLG

Query:  ALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQ--------------------M*FPD----LTV*RGQHYHLQE
        ALD  YIKVNV A+DR RYR RKG+VATNVL +CDTKGDFV+VLAGWE SAAD RIL+                      +P+    L   RGQHYHLQE
Subjt:  ALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQ--------------------M*FPD----LTV*RGQHYHLQE

Query:  *RGTSNAPTTTKEFFNMKHSSAHNVIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASN
         RG  NAP+T+KEFFNMKHSSA NVIERAFG+LKG WAILRGKS YP+EV  R+I+AC LLHNLIN EMTN DI ++ DE DS H TT+ ++I YIE SN
Subjt:  *RGTSNAPTTTKEFFNMKHSSAHNVIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASN

Query:  EWTQWRDALATLMFTEWLIIDQ
        EW+QWRD LA  MFTEW + +Q
Subjt:  EWTQWRDALATLMFTEWLIIDQ

XP_008444024.1 PREDICTED: uncharacterized protein LOC103487473 [Cucumis melo]

1.82e-142

69.8

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Query:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLG
        MDRRCF ILCHLLRTR +L+ST+ VDVEEMVA+FLHVLAHDVKNR++QREFVRS E V +HFN +LM +LR+H+ELLATPQPIT+ C ++RW  F+NC+G
Subjt:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLG

Query:  ALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQM*FPDLTV*RGQHYHLQE*RGTSNAPTTTKEFFNMKHSSAHN
        ALDDMYIKVNVSA DRPRYR RKG+VATN L +CDTKGDFVF+LAGWE SAA+ R L+     L+   G    L+E RGT NAP T KEFFNMKHSSA N
Subjt:  ALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQM*FPDLTV*RGQHYHLQE*RGTSNAPTTTKEFFNMKHSSAHN

Query:  VIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASNEWTQWRDALATLMFTEWLIIDQ
        VIERA GLLKGCWAILR KS YP+EV   +IMAC LLHNLIN E+T ++  +DED+ DS H TTSG++ITYIE SNEWT+WRDALA+ MFTEW + +Q
Subjt:  VIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASNEWTQWRDALATLMFTEWLIIDQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B9E4 uncharacterized protein LOC103487473

9.0e-115

69.46

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Query:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLG
        MDRRCF ILCHLLRTR +L+ST+ VDVEEMVA+FLHVLAHDVKNR++QREFVRS E V +HFN +LM +LR+H+ELLATPQPIT+ C ++RW  F+NC+G
Subjt:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLG

Query:  ALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQM*FPDLTV*RGQHYHLQE*RGTSNAPTTTKEFFNMKHSSAHN
        ALDDMYIKVNVSA DRPRYR RKG+VATN L +CDTKGDFVF+LAGWE SAA+ R L+    D          L+E RGT NAP T KEFFNMKHSSA N
Subjt:  ALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQM*FPDLTV*RGQHYHLQE*RGTSNAPTTTKEFFNMKHSSAHN

Query:  VIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASNEWTQWRDALATLMFTEWLIIDQ
        VIERA GLLKGCWAILR KS YP+EV   +IMAC LLHNLIN E+T ++  +DED+ DS H TTSG++ITYIE SNEWT+WRDALA+ MFTEW + +Q
Subjt:  VIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASNEWTQWRDALATLMFTEWLIIDQ

A0A5A7TA66 Retrotransposon protein

5.1e-118

69.51

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Query:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLG
        MDRRCF ILCHLLRTR +L+ST+ VDVEEMVA+FLHVLAHDVKNR++QREFVRS E V +HFN +LM +LR+H+ELLATPQPIT+ C ++RW  F+NC+G
Subjt:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLG

Query:  ALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQ--M*FPD-----LTV*RGQHYHLQE*RGTSNAPTTTKEFFNM
        ALDDMYIKVNVSA DRPRYR RKG+VATN L +CDTKGDFVF+LAGWE SAA+ R L+  +  P+         +GQ YHLQE RGT NAP T KEFFNM
Subjt:  ALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQ--M*FPD-----LTV*RGQHYHLQE*RGTSNAPTTTKEFFNM

Query:  KHSSAHNVIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASNEWTQWRDALATLMFTEW
        KHSSA NVIERA GLLKGCWAILR KS YP+EV   +IMAC LLHNLIN E+T ++  +DED+ DS H TTSG++ITYIE SNEWT+WRDALA+ MFTEW
Subjt:  KHSSAHNVIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASNEWTQWRDALATLMFTEW

Query:  LIIDQ
         + +Q
Subjt:  LIIDQ

A0A5A7TXW1 Retrotransposon protein

2.6e-114

64.91

Show/hide

Query:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLG
        MDRRCFAILCHLLRT   L ST++VDVEEMVA+FLH+LAHDVKNR +QREF+RSGET+SRHFN +L+ ++R+H+ELL  PQP+ N CT+ RW+ F+NCLG
Subjt:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLG

Query:  ALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQ--------------------M*FPD----LTV*RGQHYHLQE
        ALD  YIKVNV A+DR RYR RKG+VATNVL +CDTKGDFV+VLAGWE SAAD RIL+                      +P+    L   RGQ YHLQE
Subjt:  ALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQ--------------------M*FPD----LTV*RGQHYHLQE

Query:  *RGTSNAPTTTKEFFNMKHSSAHNVIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASN
         RG  NAP+T+KEFFNMKHSSA NVIERAFG+LKG WAILRGKS YP+EV  R+I+AC LLHNLIN EMTN DI ++ DE DS H TT+ ++I YIE SN
Subjt:  *RGTSNAPTTTKEFFNMKHSSAHNVIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASN

Query:  EWTQWRDALATLMFTEWLIIDQ
        EW+QWRD LA  MFTEW + +Q
Subjt:  EWTQWRDALATLMFTEWLIIDQ

A0A5A7VG29 Retrotransposon protein

1.8e-115

65.53

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Query:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLG
        MDRRCFAILCHLLRT   L ST++VDVEEMVA+FLH+LAHDVKNR +QREF+RSGET+SRHFN +L+ ++R+HEELL  PQP+ N CT+ RW+ F+NCLG
Subjt:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLG

Query:  ALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQ--------------------M*FPD----LTV*RGQHYHLQE
        ALD  YIKVNV A+DR RYR RKG+VATNVL +CDTKGDFV+VLAGWE SAAD RIL+                      +P+    L   RGQHYHLQE
Subjt:  ALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQ--------------------M*FPD----LTV*RGQHYHLQE

Query:  *RGTSNAPTTTKEFFNMKHSSAHNVIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASN
         RG  NAP+T+KEFFNMKHSSA NVIERAFG+LKG WAILRGKS YP+EV  R+I+AC LLHNLIN EMTN DI ++ DE DS H TT+ ++I YIE SN
Subjt:  *RGTSNAPTTTKEFFNMKHSSAHNVIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASN

Query:  EWTQWRDALATLMFTEWLIIDQ
        EW+QWRD LA  MFTEW + +Q
Subjt:  EWTQWRDALATLMFTEWLIIDQ

A0A5D3BDX0 Retrotransposon protein

1.2e-114

65.22

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Query:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLG
        MDRRCFAILCHLLRT   L ST++VDVEEMVA+FLH+LAHDVKNR +QREF+RSGET+SRHFN +L+ ++R+HEELL  PQP+ N CT+ RW+ F+NCLG
Subjt:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLG

Query:  ALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQ--------------------M*FPD----LTV*RGQHYHLQE
        ALD  YIKVNV A+DR RYR RKG+VATNVL +CDTKGDFV+VLAGWE SAAD RIL+                      +P+    L   RGQ YHLQE
Subjt:  ALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQ--------------------M*FPD----LTV*RGQHYHLQE

Query:  *RGTSNAPTTTKEFFNMKHSSAHNVIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASN
         RG  NAP+T+KEFFNMKHSSA NVIERAFG+LKG WAILRGKS YP+EV  R+I+AC LLHNLIN EMTN DI ++ DE DS H TT+ ++I YIE SN
Subjt:  *RGTSNAPTTTKEFFNMKHSSAHNVIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASN

Query:  EWTQWRDALATLMFTEWLIIDQ
        EW+QWRD LA  MFTEW + +Q
Subjt:  EWTQWRDALATLMFTEWLIIDQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G43722.1 unknown protein

7.7e-18

27.24

Show/hide

Query:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATP--QPITNICTNLR-----WQ
        M   CF  LC++L+T  +L+ T  + +EE VA+FL +  H+   R+V   F R+ ETV R F  +L     +  + + TP  Q +  I   L+     W 
Subjt:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATP--QPITNICTNLR-----WQ

Query:  SFKNCLGALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQM---*FPDLTV*RGQHYHLQE------------*R
         F   +GA+D  ++ V V    +  Y  R    + N++ ICD K  F ++  G   S  D  +LQ+      +  +   + Y+L +             R
Subjt:  SFKNCLGALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQM---*FPDLTV*RGQHYHLQE------------*R

Query:  GTSN--------------APTTTKEFFNMKHSSAHNVIERAFGLLK
         + N               P    E FN  H+S  +VIER F + K
Subjt:  GTSN--------------APTTTKEFFNMKHSSAHNVIERAFGLLK

AT5G28730.1 unknown protein

8.6e-09

21.4

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Query:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNI-CTNLRWQSFKNCL
        M    F  LC +L  +  L+S+  + ++E VAIFL + A +   R++   F  + ET+ R F+++L  + R+  E +  P+ +  +   + R Q      
Subjt:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNI-CTNLRWQSFKNCL

Query:  GALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQM*FPDLTV*RGQHYHLQE*RGTSNAPTTTKEFFNMKHSSAH
          L D+                  G  + NVL ICD    F +   G   S  D R+L                        +A  +    F++   S +
Subjt:  GALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQM*FPDLTV*RGQHYHLQE*RGTSNAPTTTKEFFNMKHSSAH

Query:  NVIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLL--HNLINWEMTNVDISNDEDENDSAHTTTSGNN
         +++  +   +G  A  R + +   ++ S + +   L   HN+ +++  NVD  N+  +     T    NN
Subjt:  NVIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLL--HNLINWEMTNVDISNDEDENDSAHTTTSGNN

AT5G28950.1 unknown protein

2.4e-11

44.44

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Query:  FKNCLGALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRIL
        FK+C+GA+DD +I   VS    P +R RKG ++ N+L  C+   +F++VL+GWE SA D ++L
Subjt:  FKNCLGALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRIL

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)

2.7e-15

32.9

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Query:  FVFVLAGWE*SAADPRIL----------------QM*FPDLTV*RGQHYHLQE*RGTSNAPTTTKEFFNMKHSSAHNVIERAFGLLKGCWAILRGKSQYP
        F++VL+GWE SA D R+L                ++ F  L   RG  YHLQE  G    P T  E FN++H S  NVIER FG+ K  +AI +    + 
Subjt:  FVFVLAGWE*SAADPRIL----------------QM*FPDLTV*RGQHYHLQE*RGTSNAPTTTKEFFNMKHSSAHNVIERAFGLLKGCWAILRGKSQYP

Query:  IEV*SRSIMACRLLHNLINWEMTNVDIS-NDEDENDSAHTTTSGNNITYIEASNE
         +  +  ++ C  LHN +  E  + +    DE  N+       GN +   E  NE
Subjt:  IEV*SRSIMACRLLHNLINWEMTNVDIS-NDEDENDSAHTTTSGNNITYIEASNE

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)

5.9e-34

33.85

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Query:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQS-FKNCL
        MD+  F  LC LL+TR  L+ T  + +E  +AIFL ++ H+++ R VQ  F  SGET+SRHFNN+L  ++ + ++     QP +N  T       FK+C+
Subjt:  MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQS-FKNCL

Query:  GALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQM*FP---DLTV*RGQHY-----------HLQE*RGTS-NAP
        G +D  +I V V   ++  +R   G +  NVL        F +VLAGWE SA+D ++L         L V +G++Y            +    G S N+ 
Subjt:  GALDDMYIKVNVSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWE*SAADPRILQM*FP---DLTV*RGQHY-----------HLQE*RGTS-NAP

Query:  TTTKEFFNMKHSSAHNVIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWE
           KE FN +H   H  I R FG LK  + IL     YP++   + ++A   LHN +  E
Subjt:  TTTKEFFNMKHSSAHNVIERAFGLLKGCWAILRGKSQYPIEV*SRSIMACRLLHNLINWE

Sequences

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CDS sequence

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ATGGACAGACGTTGTTTTGCAATTTTGTGTCATCTACTACGAACAAGGGTCAACTTAAAATCGACGAAACTCGTCGACGTTGAAGAGATGGTCGCCATCTTCCTTCATGT
GCTGGCACACGATGTGAAGAATCGGGAGGTCCAAAGGGAGTTCGTAAGGTCGGGTGAGACAGTCTCCCGACATTTCAACAACATCTTGATGGTCATTCTTCGTATGCATG
AGGAGTTATTGGCTACGCCACAACCTATAACGAACATATGCACAAACTTGAGGTGGCAATCTTTCAAGAATTGCCTAGGGGCATTAGACGACATGTACATCAAAGTTAAC
GTGTCTGCAGCGGATCGACCAAGGTATCGAATAAGAAAGGGCAAAGTGGCAACGAATGTACTCAACATATGTGATACAAAGGGGGATTTTGTTTTCGTCTTAGCCGGCTG
GGAATAATCTGCAGCGGACCCGCGTATCCTACAGATGTAATTTCCCGACCTAACCGTCTGAAGGGGGCAACATTATCATCTACAGGAGTGACGTGGTACTAGTAATGCTC
CAACAACAACGAAAGAGTTCTTCAACATGAAACATTCTTCTGCACATAATGTAATTGAAAGAGCGTTCGGCCTATTGAAGGGATGTTGGGCAATACTACGTGGAAAATCT
CAATATCCGATTGAAGTCTAAAGTCGATCTATTATGGCTTGTCGTCTCCTGCATAATTTAATAAATTGGGAAATGACGAACGTCGACATATCAAATGACGAAGATGAGAA
TGACTCGGCACACACAACTACTAGTGGTAACAACATAACATACATTGAGGCCTCAAACGAATGGACTCAATGGCGAGATGCACTTGCTACGTTGATGTTCACCGAATGGC
TCATAATTGATCAGGATGTTAGGAGAAAGAATGCTCGGCTGCGGGTTGACAACCATCGTCATCGAAAGCTAAATAAAATTGTTGAAAAAGACGTTTCAGGCCATTGTTGT
GATGAGGGGCCCAACAGGCAGTGGCTTCGGTTGGAAAGATGGCGTCAAGTGCATCATCGCCGAGAGGGACGTGTTCGACAATTGGGTCGGGAAGCATCCTACAACAAAAG
GACTCCTGAACAAGCCCTTCCCACATTACGACGAGTTGTCGTATGTGTTTGGGAAAGATCGCACGACTGGTGCCAGTGCACAGATGTTCGTGGACATTGGGTCCAACGTG
ACAGGACCCAACAATGGTGTCCCCGTAGAGAATGGCCTTGAGATCGATTTC

mRNA sequence

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Protein sequence

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MDRRCFAILCHLLRTRVNLKSTKLVDVEEMVAIFLHVLAHDVKNREVQREFVRSGETVSRHFNNILMVILRMHEELLATPQPITNICTNLRWQSFKNCLGALDDMYIKVN
VSAADRPRYRIRKGKVATNVLNICDTKGDFVFVLAGWESAADPRILQM*FPDLTV*RGQHYHLQE*RGTSNAPTTTKEFFNMKHSSAHNVIERAFGLLKGCWAILRGKSQ
YPIEVSRSIMACRLLHNLINWEMTNVDISNDEDENDSAHTTTSGNNITYIEASNEWTQWRDALATLMFTEWLIIDQDVRRKNARLRVDNHRHRKLNKIVEKDVSGHCCDE
GPNRQWLRLERWRQVHHRREGRVRQLGREASYNKRTPEQALPTLRRVVVCVWERSHDWCQCTDVRGHWVQRDRTQQWCPRREWPDRFX

Chy3G058100 (gene) of Cucumber (hystrix) v1 genome