; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy3G059270 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy3G059270
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionZinc finger (C3HC4-type RING finger) family protein
Genome locationchrH03:13038356..13039554
RNA-Seq ExpressionChy3G059270
SyntenyChy3G059270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036478.1 putative protein binding protein [Cucumis melo var. makuwa]2.22e-5458.72Show/hide
Query:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSKLNFIKLSCGHRCDDKSGDVRPMRS
        MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK                        
Subjt:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSKLNFIKLSCGHRCDDKSGDVRPMRS

Query:  MKVNGMETVLQFRQIKYFEIAICASIPIITRRHFSLLKVRQMSSYKSVSSVAQPQLSIFCGFALLYRLIGTD
                                                 MSSY++ S V QPQLS FCGFALLYRLIGTD
Subjt:  MKVNGMETVLQFRQIKYFEIAICASIPIITRRHFSLLKVRQMSSYKSVSSVAQPQLSIFCGFALLYRLIGTD

XP_004149903.1 E3 ubiquitin-protein ligase WAV3 isoform X1 [Cucumis sativus]7.76e-4098.68Show/hide
Query:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK
        MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGL FSKSGSKSSK
Subjt:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK

XP_008456491.1 PREDICTED: uncharacterized protein LOC103496430 isoform X1 [Cucumis melo]1.14e-40100Show/hide
Query:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK
        MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK
Subjt:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK

XP_008456492.1 PREDICTED: uncharacterized protein LOC103496430 isoform X2 [Cucumis melo]4.35e-4193.98Show/hide
Query:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSKLNFIKLS
        MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK   I L+
Subjt:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSKLNFIKLS

XP_011657494.1 E3 ubiquitin-protein ligase WAV3 isoform X2 [Cucumis sativus]2.96e-4092.77Show/hide
Query:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSKLNFIKLS
        MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGL FSKSGSKSSK   I L+
Subjt:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSKLNFIKLS

TrEMBL top hitse value%identityAlignment
A0A0A0KHH3 Uncharacterized protein7.1e-3498.68Show/hide
Query:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK
        MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGL FSKSGSKSSK
Subjt:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK

A0A1S3C424 uncharacterized protein LOC103496430 isoform X11.4e-34100Show/hide
Query:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK
        MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK
Subjt:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK

A0A1S3C4N1 uncharacterized protein LOC103496430 isoform X21.4e-34100Show/hide
Query:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK
        MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK
Subjt:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK

A0A5A7T0Z7 Uncharacterized protein7.8e-4158.72Show/hide
Query:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSKLNFIKLSCGHRCDDKSGDVRPMRS
        MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK                        
Subjt:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSKLNFIKLSCGHRCDDKSGDVRPMRS

Query:  MKVNGMETVLQFRQIKYFEIAICASIPIITRRHFSLLKVRQMSSYKSVSSVAQPQLSIFCGFALLYRLIGTD
                                                 MSSY++ S V QPQLS FCGFALLYRLIGTD
Subjt:  MKVNGMETVLQFRQIKYFEIAICASIPIITRRHFSLLKVRQMSSYKSVSSVAQPQLSIFCGFALLYRLIGTD

A0A5D3BJK8 Zinc finger (C3HC4-type RING finger) family protein1.4e-34100Show/hide
Query:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK
        MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK
Subjt:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38970.1 Zinc finger (C3HC4-type RING finger) family protein4.0e-2159.34Show/hide
Query:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK-----LNFIKLSCGH
        MG++WR+MKLALGLNLC ++PRTLE+SP+    +STER SD ALLSP +W    P TPTPSSHGL  S++ SKSSK     LN +K   GH
Subjt:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK-----LNFIKLSCGH

AT3G54780.1 Zinc finger (C3HC4-type RING finger) family protein2.4e-1856.04Show/hide
Query:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK-----LNFIKLSCGH
        M SKW+KMKLAL LNLC ++PRTLE+ P     +S E  SDAALLSP +W    P TPTPSS+    S+S SKSSK     LN +K  CGH
Subjt:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK-----LNFIKLSCGH

AT3G54780.2 Zinc finger (C3HC4-type RING finger) family protein2.4e-1856.04Show/hide
Query:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK-----LNFIKLSCGH
        M SKW+KMKLAL LNLC ++PRTLE+ P     +S E  SDAALLSP +W    P TPTPSS+    S+S SKSSK     LN +K  CGH
Subjt:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK-----LNFIKLSCGH

AT3G54780.3 Zinc finger (C3HC4-type RING finger) family protein3.2e-1855.43Show/hide
Query:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK------LNFIKLSCGH
        M SKW+KMKLAL LNLC ++PRTLE+ P     +S E  SDAALLSP +W    P TPTPSS+    S+S SKSSK      LN +K  CGH
Subjt:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSK------LNFIKLSCGH

AT5G60710.1 Zinc finger (C3HC4-type RING finger) family protein1.4e-1358.67Show/hide
Query:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSS
        MGSKWRK K+ALGLNLC++VP+TLEDS          R  DA  LSP      RPSTPTPSS GL   +S SKSS
Subjt:  MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGTAAGTGGAGGAAGATGAAGCTGGCTCTTGGTTTGAATCTTTGTGTTTTTGTTCCAAGAACACTTGAAGACTCTCCATCTTTACCTGATTGTGATTCTACTGA
GAGATTTTCGGATGCTGCTTTGCTCTCTCCTGCACATTGGGGCTCTTCTCGCCCTTCTACACCAACTCCATCTTCTCATGGCTTAACTTTCTCTAAAAGTGGCAGCAAAT
CTTCAAAGTTAAACTTCATCAAACTTAGTTGTGGACATAGATGTGATGACAAAAGTGGTGATGTTCGTCCAATGAGGTCAATGAAAGTTAATGGAATGGAAACGGTTCTG
CAATTTAGACAAATTAAATATTTTGAAATAGCAATTTGCGCTTCGATTCCTATCATTACCAGACGTCATTTTTCGTTGCTGAAAGTTAGGCAGATGTCTTCTTACAAAAG
TGTCTCTAGTGTGGCTCAGCCTCAGTTATCCATTTTCTGTGGTTTTGCTCTCCTCTATAGGTTGATTGGGACTGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGTAAGTGGAGGAAGATGAAGCTGGCTCTTGGTTTGAATCTTTGTGTTTTTGTTCCAAGAACACTTGAAGACTCTCCATCTTTACCTGATTGTGATTCTACTGA
GAGATTTTCGGATGCTGCTTTGCTCTCTCCTGCACATTGGGGCTCTTCTCGCCCTTCTACACCAACTCCATCTTCTCATGGCTTAACTTTCTCTAAAAGTGGCAGCAAAT
CTTCAAAGTTAAACTTCATCAAACTTAGTTGTGGACATAGATGTGATGACAAAAGTGGTGATGTTCGTCCAATGAGGTCAATGAAAGTTAATGGAATGGAAACGGTTCTG
CAATTTAGACAAATTAAATATTTTGAAATAGCAATTTGCGCTTCGATTCCTATCATTACCAGACGTCATTTTTCGTTGCTGAAAGTTAGGCAGATGTCTTCTTACAAAAG
TGTCTCTAGTGTGGCTCAGCCTCAGTTATCCATTTTCTGTGGTTTTGCTCTCCTCTATAGGTTGATTGGGACTGACTAG
Protein sequenceShow/hide protein sequence
MGSKWRKMKLALGLNLCVFVPRTLEDSPSLPDCDSTERFSDAALLSPAHWGSSRPSTPTPSSHGLTFSKSGSKSSKLNFIKLSCGHRCDDKSGDVRPMRSMKVNGMETVL
QFRQIKYFEIAICASIPIITRRHFSLLKVRQMSSYKSVSSVAQPQLSIFCGFALLYRLIGTD