CuGenDBv2

Gene ID	Chy3G059690
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	centromere protein V-like
Genome location	chrH03:13417534..13418561
RNA-Seq Expression	Chy3G059690
Synteny	Chy3G059690
Gene Ontology terms	GO:0016846 - carbon-sulfur lyase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR006913 - CENP-V/GFA domain IPR011057 - Mss4-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004146757.2 centromere protein V [Cucumis sativus]

4.90e-101

97.14

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Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLE+FKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLNISLL
        CVDPGTLTH+EVRQFDGSNWEAS DQTGIASLSKLNISLL
Subjt:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLNISLL

XP_008464792.1 PREDICTED: centromere protein V isoform X4 [Cucumis melo]

5.92e-99

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Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLE+FKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFK
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLNISLL
        CVDPGTLTHVEVRQFDGSNWEASYD TGIAS SKLN + L
Subjt:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLNISLL

XP_008464793.1 PREDICTED: centromere protein V isoform X5 [Cucumis melo]

1.12e-98

97.06

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Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLE+FKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFK
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLN
        CVDPGTLTHVEVRQFDGSNWEASYD TGIAS SKLN
Subjt:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLN

XP_016903270.1 PREDICTED: centromere protein V isoform X1 [Cucumis melo]

1.64e-98

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Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLE+FKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFK
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLNISLL
        CVDPGTLTHVEVRQFDGSNWEASYD TGIAS SKLN S +
Subjt:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLNISLL

XP_016903271.1 PREDICTED: centromere protein V isoform X6 [Cucumis melo]

3.76e-99

96.38

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Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLE+FKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFK
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLNIS
        CVDPGTLTHVEVRQFDGSNWEASYD TGIAS SKLN S
Subjt:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLNIS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KE05 CENP-V/GFA domain-containing protein

5.9e-77

97.1

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Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        MASELVVH+GGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLE+FKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLNIS
        CVDPGTLTH+EVRQFDGSNWEAS DQTGIASLSKLNIS
Subjt:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLNIS

A0A1S3CMD8 centromere protein V isoform X2

5.0e-76

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Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLE+FKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFK
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLNISLL
        CVDPGTLTHVEVRQFDGSNWEASYD TGIAS SKLN + L
Subjt:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLNISLL

A0A1S4E4W3 centromere protein V isoform X6

3.8e-76

96.38

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Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLE+FKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFK
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLNIS
        CVDPGTLTHVEVRQFDGSNWEASYD TGIAS SKLN S
Subjt:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLNIS

A0A1S4E5L6 centromere protein V isoform X1

2.9e-76

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Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLE+FKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFK
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLNISLL
        CVDPGTLTHVEVRQFDGSNWEASYD TGIAS SKLN S +
Subjt:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLNISLL

A0A5D3CJK9 Centromere protein V isoform X1

2.9e-76

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Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLE+FKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFY PRSNPDGVAITFK
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLNISLL
        CVDPGTLTHVEVRQFDGSNWEASYD TGIAS SKLN S +
Subjt:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSKLNISLL

SwissProt top hits

e value

%identity

Alignment

A0A0U1RR11 Centromere protein V-like protein 1

8.3e-20

39.13

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Query:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDP
        LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP  +F LL  + + V TY   +H A H+FC  CG+ SF+   S+P    +   C+D 
Subjt:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDP

Query:  GTLTHVEVRQFDGSN
        GT+  V + +  G +
Subjt:  GTLTHVEVRQFDGSN

A0A0U1RRI6 Centromere protein V-like protein 3

8.3e-20

39.13

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Query:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDP
        LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP  +F LL  + + V TY   +H A H+FC  CG+ SF+   S+P    +   C+D 
Subjt:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDP

Query:  GTLTHVEVRQFDGSN
        GT+  V + +  G +
Subjt:  GTLTHVEVRQFDGSN

P0DPI3 Centromere protein V-like protein 2

8.3e-20

39.13

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Query:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDP
        LV H GGCHC  VR+ V APA +   DC+C  C  + + HF+VP  +F LL  + + V TY   +H A H+FC  CG+ SF+   S+P    +   C+D 
Subjt:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDP

Query:  GTLTHVEVRQFDGSN
        GT+  V + +  G +
Subjt:  GTLTHVEVRQFDGSN

Q7Z7K6 Centromere protein V

1.1e-32

49.62

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Query:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDP
        LV H GGCHC  VR+ V A A +  +DCNCS C  + N HFIVP  +FKLL   +  ++TYTF +H A+HTFCK CG+ SFY PRSNP G  I   C+D 
Subjt:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDP

Query:  GTLTHVEVRQFDGSNWE-ASYDQTGIASLSK
        GT+  +   +F+GS+WE A  +   I ++SK
Subjt:  GTLTHVEVRQFDGSNWE-ASYDQTGIASLSK

Q9CXS4 Centromere protein V

3.8e-33

50.38

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Query:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDP
        LV H GGCHC  VR+ V A A +  +DCNCS C  + N HFIVP  +FKLL  + + ++TYTF +H A+HTFCK CG+ SFY PRSNP G  I   C+D 
Subjt:  LVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDP

Query:  GTLTHVEVRQFDGSNWE-ASYDQTGIASLSK
        GT+  V   +F+GS+WE A  +   I ++SK
Subjt:  GTLTHVEVRQFDGSNWE-ASYDQTGIASLSK

Arabidopsis top hits

e value

%identity

Alignment

AT5G16940.1 carbon-sulfur lyases

6.6e-57

67.91

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Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        M SEL+ H GGCHC K++WRV+A  SV+AW CNCS+C MR N HFIVP   F+LL DS +F++TYTFG+HTAKHTFCK CGITSFY PRSNPDGVA+T K
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSK
        CV  GTL H+EV+ +DG NWE S+ +TGIAS SK
Subjt:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSK

AT5G16940.2 carbon-sulfur lyases

6.6e-57

67.91

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Query:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK
        M SEL+ H GGCHC K++WRV+A  SV+AW CNCS+C MR N HFIVP   F+LL DS +F++TYTFG+HTAKHTFCK CGITSFY PRSNPDGVA+T K
Subjt:  MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFK

Query:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSK
        CV  GTL H+EV+ +DG NWE S+ +TGIAS SK
Subjt:  CVDPGTLTHVEVRQFDGSNWEASYDQTGIASLSK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTTCTGAGTTGGTTGTACATAATGGTGGATGTCACTGCAAGAAAGTAAGATGGCGAGTTGAAGCACCTGCCAGTGTTGTTGCTTGGGATTGCAACTGTTCCAATTG
CTTCATGAGGGCCAATACACATTTTATTGTACCTTTGGAACAGTTCAAGCTTTTAGGAGATTCTAGCAACTTTGTTTCTACCTACACATTTGGTTCTCACACTGCAAAAC
ATACTTTCTGCAAAAACTGCGGCATTACCTCATTTTACCATCCACGCTCAAATCCAGATGGAGTTGCTATAACTTTCAAATGTGTTGATCCTGGAACTTTGACCCATGTT
GAGGTTAGGCAGTTTGATGGGAGCAACTGGGAGGCCTCTTATGATCAAACAGGCATTGCTTCATTGTCAAAGTTGAACATAAGTCTGTTGCATTTTAACTTTGATCCACT
TTTCTGA

mRNA sequence

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Protein sequence

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MASELVVHNGGCHCKKVRWRVEAPASVVAWDCNCSNCFMRANTHFIVPLEQFKLLGDSSNFVSTYTFGSHTAKHTFCKNCGITSFYHPRSNPDGVAITFKCVDPGTLTHV
EVRQFDGSNWEASYDQTGIASLSKLNISLLHFNFDPLF

Chy3G059690 (gene) of Cucumber (hystrix) v1 genome