; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy3G061660 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy3G061660
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionflowering-promoting factor 1-like
Genome locationchrH03:15012255..15016737
RNA-Seq ExpressionChy3G061660
SyntenyChy3G061660
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0010228 - vegetative to reproductive phase transition of meristem (biological process)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652180.1 hypothetical protein Csa_021977 [Cucumis sativus]1.75e-7289.68Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRDIYFHRRSNSPVAEVSV
        KNPNLFHVRDI        P+ ++S+
Subjt:  KNPNLFHVRDIYFHRRSNSPVAEVSV

XP_004138764.1 flowering-promoting factor 1 [Cucumis sativus]1.41e-7499.1Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRDI
        KNPNLFHVRD+
Subjt:  KNPNLFHVRDI

XP_022132061.1 flowering-promoting factor 1-like [Momordica charantia]2.07e-6992.79Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNG+IRLIENPQADSDGRLGNSRR KVLIHLPTGQPV+SYSSLE ILT+LGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNS+HMYDIVI
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRDI
        KNPNLFHVRD+
Subjt:  KNPNLFHVRDI

XP_022950996.1 flowering-promoting factor 1-like protein 2 [Cucurbita moschata]8.43e-6994.59Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRR KVLI+LPTGQ V+SYSSLE ILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRDI
        KNPNLFHVRD+
Subjt:  KNPNLFHVRDI

XP_038886640.1 flowering-promoting factor 1-like protein 2 [Benincasa hispida]1.57e-7195.5Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQ VTSY SLENILTSLGWERYYGGDPELFQFHK SSIDLISLPRDFAKFNS+HMYDIVI
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRDI
        KNPNLFHVRD+
Subjt:  KNPNLFHVRDI

TrEMBL top hitse value%identityAlignment
A0A0A0LPY7 Uncharacterized protein1.5e-5799.1Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRDI
        KNPNLFHVRD+
Subjt:  KNPNLFHVRDI

A0A1S3BBE4 flowering-promoting factor 1-like1.5e-5799.1Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRDI
        KNPNLFHVRD+
Subjt:  KNPNLFHVRDI

A0A5A7VCS2 Flowering-promoting factor 11.5e-5799.1Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRDI
        KNPNLFHVRD+
Subjt:  KNPNLFHVRDI

A0A6J1BR67 flowering-promoting factor 1-like1.3e-5392.79Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNG+IRLIENPQADSDGRLGNSRR KVLIHLPTGQPV+SYSSLE ILT+LGWERYYGGDP+LFQFHKRSSIDLISLPRDFAKFNS+HMYDIVI
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRDI
        KNPNLFHVRD+
Subjt:  KNPNLFHVRDI

A0A6J1KTX8 flowering-promoting factor 1-like protein 23.8e-5394.59Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGVIRLIENPQADSDGRLGNSRR KVLI+LPTGQ V+SYSSLE ILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRDI
        KNPNLFHVRD+
Subjt:  KNPNLFHVRDI

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 12.1e-4072.32Show/hide
Query:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYY-GGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDI
        MSGVWVFKNGVIRL+ENP Q+ SD       R KV+++LPTG+ V+SYS+LE IL SLGWERY+ GGD +L QFHKRSSIDLISLPRDF KFNS++MYDI
Subjt:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYY-GGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDI

Query:  VIKNPNLFHVRD
        V+KNPN FHVRD
Subjt:  VIKNPNLFHVRD

O24340 Flowering-promoting factor 11.4e-3971.17Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYY-GGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIV
        MSGVWVFKNGVIRL+ENP  +  G   NSRR KV+++LPTG+ ++SYS+LE IL SLGWERY+ GGD +L QFHKRSSIDLISLP+DF KF+S++MYDIV
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYY-GGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIV

Query:  IKNPNLFHVRD
        +KNPN FHVRD
Subjt:  IKNPNLFHVRD

Q5Q0B3 Flowering-promoting factor 1-like protein 11.3e-3762.9Show/hide
Query:  MSGVWVF-KNGVIRLIENP----------QADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGD--PELFQFHKRSSIDLISLPRDF
        MSGVWVF KNGV+RL+ENP           + S G      R K+L+HLP+ + V+SY SLE IL +LGWERYY GD    L QFHKR+SIDLISLPRDF
Subjt:  MSGVWVF-KNGVIRLIENP----------QADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGD--PELFQFHKRSSIDLISLPRDF

Query:  AKFNSIHMYDIVIKNPNLFHVRDI
        +KFNSIHMYDIV+KNPN+FHVRD+
Subjt:  AKFNSIHMYDIVIKNPNLFHVRDI

Q9LGE3 Flowering-promoting factor 1-like protein 11.4e-3362.73Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVFKNGV+RL+E  QA +   +   RR K L+H P+GQ V+SY++LE  LT+LGWERYY  DP LFQFHKR S+DLISLP DF+ F+S+HMYDIV+
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRD
        KN + F V D
Subjt:  KNPNLFHVRD

Q9LXB5 Flowering-promoting factor 1-like protein 22.1e-4069.09Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVF NGVIRL+ENP         +  R  VL++LPTG+ V+SYSSLE IL SLGWERY+ GD +L Q+HKRSSIDLISLPRDF+KFNS++MYDIV+
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 19.0e-3962.9Show/hide
Query:  MSGVWVF-KNGVIRLIENP----------QADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGD--PELFQFHKRSSIDLISLPRDF
        MSGVWVF KNGV+RL+ENP           + S G      R K+L+HLP+ + V+SY SLE IL +LGWERYY GD    L QFHKR+SIDLISLPRDF
Subjt:  MSGVWVF-KNGVIRLIENP----------QADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGD--PELFQFHKRSSIDLISLPRDF

Query:  AKFNSIHMYDIVIKNPNLFHVRDI
        +KFNSIHMYDIV+KNPN+FHVRD+
Subjt:  AKFNSIHMYDIVIKNPNLFHVRDI

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)1.5e-4169.09Show/hide
Query:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI
        MSGVWVF NGVIRL+ENP         +  R  VL++LPTG+ V+SYSSLE IL SLGWERY+ GD +L Q+HKRSSIDLISLPRDF+KFNS++MYDIV+
Subjt:  MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVI

Query:  KNPNLFHVRD
        KNPN FHVRD
Subjt:  KNPNLFHVRD

AT5G24860.1 flowering promoting factor 11.5e-4172.32Show/hide
Query:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYY-GGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDI
        MSGVWVFKNGVIRL+ENP Q+ SD       R KV+++LPTG+ V+SYS+LE IL SLGWERY+ GGD +L QFHKRSSIDLISLPRDF KFNS++MYDI
Subjt:  MSGVWVFKNGVIRLIENP-QADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYY-GGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDI

Query:  VIKNPNLFHVRD
        V+KNPN FHVRD
Subjt:  VIKNPNLFHVRD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGGGTTTGGGTTTTCAAGAACGGCGTAATTCGATTGATTGAAAACCCTCAAGCGGATTCCGATGGAAGGCTAGGGAACTCAAGGCGATCGAAGGTTTTA
ATACACTTACCGACAGGTCAGCCCGTGACATCTTACTCTTCGCTAGAGAATATCCTAACATCATTGGGATGGGAAAGGTACTATGGTGGTGATCCAGAGCTTTTC
CAGTTTCATAAACGTTCTTCTATTGACCTAATTTCTCTCCCTAGAGATTTTGCCAAATTCAACTCCATTCATATGTATGACATCGTCATTAAAAACCCAAATCTC
TTCCACGTCCGAGATATTTACTTCCACCGTCGATCTAACTCCCCGGTCGCAGAAGTGAGCGTCACGGCGAAAGTAGAGAAGAAGGGAGTCGAAGATATACTGTGG
AGGCAGTTTGTGAAAGAGCATTTCGCTTCCCGCCAGTATGGCCATTTATTTTCCCTCTCGATTTACAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGGGTTTGGGTTTTCAAGAACGGCGTAATTCGATTGATTGAAAACCCTCAAGCGGATTCCGATGGAAGGCTAGGGAACTCAAGGCGATCGAAGGTTTTA
ATACACTTACCGACAGGTCAGCCCGTGACATCTTACTCTTCGCTAGAGAATATCCTAACATCATTGGGATGGGAAAGGTACTATGGTGGTGATCCAGAGCTTTTC
CAGTTTCATAAACGTTCTTCTATTGACCTAATTTCTCTCCCTAGAGATTTTGCCAAATTCAACTCCATTCATATGTATGACATCGTCATTAAAAACCCAAATCTC
TTCCACGTCCGAGATATTTACTTCCACCGTCGATCTAACTCCCCGGTCGCAGAAGTGAGCGTCACGGCGAAAGTAGAGAAGAAGGGAGTCGAAGATATACTGTGG
AGGCAGTTTGTGAAAGAGCATTTCGCTTCCCGCCAGTATGGCCATTTATTTTCCCTCTCGATTTACAGGTAA
Protein sequenceShow/hide protein sequence
MSGVWVFKNGVIRLIENPQADSDGRLGNSRRSKVLIHLPTGQPVTSYSSLENILTSLGWERYYGGDPELFQFHKRSSIDLISLPRDFAKFNSIHMYDIVIKNPNL
FHVRDIYFHRRSNSPVAEVSVTAKVEKKGVEDILWRQFVKEHFASRQYGHLFSLSIYR