; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy3G063000 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy3G063000
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionCHCH domain-containing protein
Genome locationchrH03:16202854..16205100
RNA-Seq ExpressionChy3G063000
SyntenyChy3G063000
Gene Ontology termsGO:0007005 - mitochondrion organization (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily
IPR010625 - CHCH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065106.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10 [Cucumis melo var. makuwa]3.45e-8495.14Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGGS
        MPRRSSGGRSA RPA RAP RNPPAP + APPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGGS
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGGS

Query:  DACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        DAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  DACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

XP_008444901.1 PREDICTED: uncharacterized protein C6C3.02c-like [Cucumis melo]9.89e-8494.44Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGGS
        MPRRSSGGRSA RPA RAP RNPPAP + APPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVA+NSGGS
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGGS

Query:  DACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        DAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  DACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

XP_011649682.1 hemiasterlin resistant protein 1 [Cucumis sativus]4.56e-8998.61Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGGS
        MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHET+DSSASSAPSVASNSGGS
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGGS

Query:  DACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        DAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  DACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

XP_022962551.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial [Cucurbita moschata]2.31e-8092.41Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSA-SSAPSVASNSGG
        MPRRSSGGRSASRPAPRAP RN PAPA  APPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS  SSAPSVASN GG
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSA-SSAPSVASNSGG

Query:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        SDAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECR+SSGSVLGA
Subjt:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

XP_038886373.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like [Benincasa hispida]6.22e-8797.22Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGGS
        MPRRSSGGRSASRPAPRAPLRNPPAPAS APPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSS SSAPSVA+N GGS
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGGS

Query:  DACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        DACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  DACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

TrEMBL top hitse value%identityAlignment
A0A0A0LNY2 CHCH domain-containing protein1.7e-6898.61Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGGS
        MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHET+DSSASSAPSVASNSGGS
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGGS

Query:  DACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        DAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  DACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

A0A1S3BAZ1 uncharacterized protein C6C3.02c-like1.9e-6494.44Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGGS
        MPRRSSGGRSA RPA RAP RNPPAP + APPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVA+NSGGS
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGGS

Query:  DACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        DAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  DACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

A0A5A7VFK2 Coiled-coil-helix-coiled-coil-helix domain-containing protein 108.5e-6595.14Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGGS
        MPRRSSGGRSA RPA RAP RNPPAP + APPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGGS
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGGS

Query:  DACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        DAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
Subjt:  DACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

A0A6J1HDK4 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial6.8e-6292.41Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSA-SSAPSVASNSGG
        MPRRSSGGRSASRPAPRAP RN PAPA  APPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS  SSAPSVASN GG
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSA-SSAPSVASNSGG

Query:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        SDAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECR+SSGSVLGA
Subjt:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

A0A6J1K966 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like2.0e-6191.72Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSA-SSAPSVASNSGG
        MPRRSSGGRSASRPAPRAP RN PAPA+ APPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS  SSAPSVA N GG
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSA-SSAPSVASNSGG

Query:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
        SDAC VQSKSFQDCLNHYGSDISKCQFYLDMLQECR+SSGSVLGA
Subjt:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09570.1 Cox19-like CHCH family protein1.1e-3555.86Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPA-SPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGG
        MPR SSGGRS+ RP+  A  R+PP  + + APPPA  Q   GGS LG +GA+I +G+A+GTG+A  HR VD+VMGPRT +HET+ S   SA +  +    
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPA-SPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGG

Query:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
          AC + SK+FQDC+NH+GSDISKCQFY+DML EC+++SGSV+ A
Subjt:  SDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

AT5G64400.1 CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625)1.7e-4165.07Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETID-SSASSAPSVASNSG
        M RRSSGGRSA RP P A     P P   APPPAP Q  GGGG M  G+G+TIAQGMAFGTGSAVAHRAVD+VMGPRTIQHE ++ +SAS+AP  A ++ 
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETID-SSASSAPSVASNSG

Query:  GSDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA
         S  C + +K+FQDC+  YGS+ISKCQFY+DML ECR++SGSV+GA
Subjt:  GSDACTVQSKSFQDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA

AT5G64400.2 BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G09570.1)5.0e-2563.16Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETID-SSASSAPSVASNSG
        M RRSSGGRSA RP P A     P P   APPPAP Q  GGGG M  G+G+TIAQGMAFGTGSAVAHRAVD+VMGPRTIQHE ++ +SAS+AP  A ++ 
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETID-SSASSAPSVASNSG

Query:  GSDACTVQSKSFQD
         S  C + +K+FQD
Subjt:  GSDACTVQSKSFQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGTCGTAGCTCCGGTGGACGATCTGCTTCCCGTCCCGCCCCTCGCGCTCCACTTCGCAATCCTCCGGCGCCAGCTAGTCCCGCTCCTCCACCTGCACCTGTACA
AGGTGGTGGTGGTGGTTCTATGCTTGGAGGTCTTGGTGCCACTATTGCTCAAGGTATGGCCTTTGGTACCGGAAGTGCAGTGGCTCACAGGGCTGTCGATGCCGTAATGG
GTCCTCGAACCATCCAGCATGAGACCATTGATTCATCAGCCTCCTCAGCACCTTCTGTTGCAAGCAATTCTGGTGGTTCTGATGCTTGTACTGTTCAGTCAAAATCCTTT
CAAGATTGCCTGAACCACTATGGAAGTGACATCAGCAAGTGCCAATTCTACTTGGATATGTTGCAGGAATGCCGCAGGAGCTCAGGTTCTGTTTTGGGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGTCGTAGCTCCGGTGGACGATCTGCTTCCCGTCCCGCCCCTCGCGCTCCACTTCGCAATCCTCCGGCGCCAGCTAGTCCCGCTCCTCCACCTGCACCTGTACA
AGGTGGTGGTGGTGGTTCTATGCTTGGAGGTCTTGGTGCCACTATTGCTCAAGGTATGGCCTTTGGTACCGGAAGTGCAGTGGCTCACAGGGCTGTCGATGCCGTAATGG
GTCCTCGAACCATCCAGCATGAGACCATTGATTCATCAGCCTCCTCAGCACCTTCTGTTGCAAGCAATTCTGGTGGTTCTGATGCTTGTACTGTTCAGTCAAAATCCTTT
CAAGATTGCCTGAACCACTATGGAAGTGACATCAGCAAGTGCCAATTCTACTTGGATATGTTGCAGGAATGCCGCAGGAGCTCAGGTTCTGTTTTGGGTGCTTAA
Protein sequenceShow/hide protein sequence
MPRRSSGGRSASRPAPRAPLRNPPAPASPAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRTIQHETIDSSASSAPSVASNSGGSDACTVQSKSF
QDCLNHYGSDISKCQFYLDMLQECRRSSGSVLGA