CuGenDBv2

Gene ID	Chy3G063430
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	methyl-CpG-binding domain-containing protein 8 isoform X1
Genome location	chrH03:16504889..16515717
RNA-Seq Expression	Chy3G063430
Synteny	Chy3G063430
Gene Ontology terms	NA
InterPro domains	IPR037472 - Methyl-CpG-binding domain-containing protein 8

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004152634.1 methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis sativus]

3.17e-151

97.02

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Query:  MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSS-TSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR
        MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSS TSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR
Subjt:  MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSS-TSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR

Query:  PQSPNRLDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPEF
        PQSP+RLDTESAQIVHLFNQLFVGDSHCVVNDS GDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSS VPIKRRRGRPRKDSNRFVQSNGNAAPEF
Subjt:  PQSPNRLDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPEF

Query:  KSGCDKPAAAA--KEEIVMDHSSFGAQADEGGNVD
        KSGCDKPAAAA  KEEIVMDHSS GAQADEGGNVD
Subjt:  KSGCDKPAAAA--KEEIVMDHSSFGAQADEGGNVD

XP_004152635.1 methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis sativus]

1.08e-139

97.26

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Query:  MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSS-TSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR
        MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSS TSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR
Subjt:  MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSS-TSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR

Query:  PQSPNRLDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPEF
        PQSP+RLDTESAQIVHLFNQLFVGDSHCVVNDS GDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSS VPIKRRRGRPRKDSNRFVQSNGNAAPEF
Subjt:  PQSPNRLDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPEF

Query:  KSGCDKPAAAA--KEEIVM
        KSGCDKPAAAA  KEEIVM
Subjt:  KSGCDKPAAAA--KEEIVM

XP_008444842.1 PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X1 [Cucumis melo]

6.89e-148

95.73

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Query:  MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSS-TSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR
        MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSS TSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR
Subjt:  MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSS-TSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR

Query:  PQSPNRLDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPEF
        PQS +RLDTESAQIVHLFNQLFVGDSHC VNDS GDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSH PIKRRRGRPRKDSNRFVQSNGNAAPEF
Subjt:  PQSPNRLDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPEF

Query:  KSGCDKPA-AAAKEEIVMDHSSFGAQADEGGNVD
        KSG DKPA AAA+EEIVMDHSS GAQADEGGNVD
Subjt:  KSGCDKPA-AAAKEEIVMDHSSFGAQADEGGNVD

XP_008444843.1 PREDICTED: methyl-CpG-binding domain-containing protein 8 isoform X2 [Cucumis melo]

2.35e-136

95.87

Show/hide

Query:  MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSS-TSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR
        MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSS TSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR
Subjt:  MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSS-TSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR

Query:  PQSPNRLDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPEF
        PQS +RLDTESAQIVHLFNQLFVGDSHC VNDS GDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSH PIKRRRGRPRKDSNRFVQSNGNAAPEF
Subjt:  PQSPNRLDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPEF

Query:  KSGCDKPA-AAAKEEIVM
        KSG DKPA AAA+EEIVM
Subjt:  KSGCDKPA-AAAKEEIVM

XP_038885025.1 methyl-CpG-binding domain-containing protein 8 isoform X1 [Benincasa hispida]

6.03e-134

89.96

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Query:  MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSS--TSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTI
        MASTTMV S SNDS+RMNPLPIIDLRLLSQSEL+CLSRFSSSSSSS  TSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTI
Subjt:  MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSS--TSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTI

Query:  RPQSPNRLDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPE
        RPQSP+RLDTESAQIV LF QLFVGD HC VNDS GDGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS+ PIKRRRGRPRKDSNRF QSNGNAAPE
Subjt:  RPQSPNRLDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPE

Query:  FKSGCDKPAAAA----KEEIVMDHSSFGA
        FKSGCDKPAAAA    +EEIVMDHSS GA
Subjt:  FKSGCDKPAAAA----KEEIVMDHSSFGA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPH8 Uncharacterized protein

5.0e-107

97.26

Show/hide

Query:  MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF-SSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR
        MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF SSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR
Subjt:  MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF-SSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR

Query:  PQSPNRLDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPEF
        PQSP+RLDTESAQIVHLFNQLFVGDSHCVVNDS GDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSS VPIKRRRGRPRKDSNRFVQSNGNAAPEF
Subjt:  PQSPNRLDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPEF

Query:  KSGCDKP--AAAAKEEIVM
        KSGCDKP  AAAAKEEIVM
Subjt:  KSGCDKP--AAAAKEEIVM

A0A1S3BAU3 methyl-CpG-binding domain-containing protein 8 isoform X2

1.8e-104

95.87

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Query:  MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF-SSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR
        MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF SSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR
Subjt:  MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF-SSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR

Query:  PQSPNRLDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPEF
        PQS +RLDTESAQIVHLFNQLFVGDSHC VNDS GDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSH PIKRRRGRPRKDSNRFVQSNGNAAPEF
Subjt:  PQSPNRLDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPEF

Query:  KSGCDKPA-AAAKEEIVM
        KSG DKPA AAA+EEIVM
Subjt:  KSGCDKPA-AAAKEEIVM

A0A1S3BC64 methyl-CpG-binding domain-containing protein 8 isoform X1

2.1e-113

95.73

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Query:  MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF-SSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR
        MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF SSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR
Subjt:  MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF-SSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR

Query:  PQSPNRLDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPEF
        PQS +RLDTESAQIVHLFNQLFVGDSHC VNDS GDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSH PIKRRRGRPRKDSNRFVQSNGNAAPEF
Subjt:  PQSPNRLDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPEF

Query:  KSGCDKPA-AAAKEEIVMDHSSFGAQADEGGNVD
        KSG DKPA AAA+EEIVMDHSS GAQADEGGNVD
Subjt:  KSGCDKPA-AAAKEEIVMDHSSFGAQADEGGNVD

A0A5A7VH26 Methyl-CpG-binding domain-containing protein 8 isoform X2

1.8e-104

95.87

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Query:  MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF-SSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR
        MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF SSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR
Subjt:  MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF-SSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIR

Query:  PQSPNRLDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPEF
        PQS +RLDTESAQIVHLFNQLFVGDSHC VNDS GDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSH PIKRRRGRPRKDSNRFVQSNGNAAPEF
Subjt:  PQSPNRLDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPEF

Query:  KSGCDKPA-AAAKEEIVM
        KSG DKPA AAA+EEIVM
Subjt:  KSGCDKPA-AAAKEEIVM

A0A6J1BV99 methyl-CpG-binding domain-containing protein 8 isoform X1

4.2e-90

82.51

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Query:  MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRP
        MASTTMV S SN+S+RMN LPIIDLRLLSQSEL+CLSRF SSSSSSTSQSN++DDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQF SSSSSS IRP
Subjt:  MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRP

Query:  QSPNRLDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPEFK
        QSP RLD ESA+I+ LF QLFVGDSHC V++S GD DEDLVL+NH YDESVPDSSYAIFQSIPVD+IDSS+ PIKRRRGRPRKDSNRF QSNGNA P  K
Subjt:  QSPNRLDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPEFK

Query:  SGCDKPAAAAKEEIVMDHSSFGA
        SGC+K   A +EEIVMD SS GA
Subjt:  SGCDKPAAAAKEEIVMDHSSFGA

SwissProt top hits

e value

%identity

Alignment

Q9LME6 Methyl-CpG-binding domain-containing protein 8

7.9e-17

44.32

Show/hide

Query:  LPIIDLRLLSQSELHCLSRFSS---SSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPNRLDTESAQIVHL
        LP+ID RLLSQSEL  LS+ SS   SSS+S + S   DD L PKIDRSVFNESAGSRKQT+ RLRLA R PQ      S   +    +R   E  Q+  L
Subjt:  LPIIDLRLLSQSELHCLSRFSS---SSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPNRLDTESAQIVHL

Query:  FNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVID------SSHVPIKRRRGRPRKDSN
           LF  DS+    +   +G+E+L       +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Subjt:  FNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVID------SSHVPIKRRRGRPRKDSN

Arabidopsis top hits

e value

%identity

Alignment

AT1G22310.2 methyl-CPG-binding domain 8

5.6e-18

44.32

Show/hide

Query:  LPIIDLRLLSQSELHCLSRFSS---SSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPNRLDTESAQIVHL
        LP+ID RLLSQSEL  LS+ SS   SSS+S + S   DD L PKIDRSVFNESAGSRKQT+ RLRLA R PQ      S   +    +R   E  Q+  L
Subjt:  LPIIDLRLLSQSELHCLSRFSS---SSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPNRLDTESAQIVHL

Query:  FNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVID------SSHVPIKRRRGRPRKDSN
           LF  DS+    +   +G+E+L       +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Subjt:  FNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVID------SSHVPIKRRRGRPRKDSN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCCACAACTATGGTTCCTTCCTCTTCCAACGATAGTTACCGCATGAATCCTCTTCCGATCATAGATCTCCGTCTCCTCTCCCAATCCGAGCTCCATTGT
CTTTCCCGTTTCTCCTCCTCCTCCTCCTCTTCAACCTCCCAATCCAACAACGAAGACGATGTTCTAATCCCCAAAATCGATCGATCTGTCTTCAACGAGTCCGCC
GGTAGCCGAAAACAAACCTATTCTCGCCTCCGTTTAGCCCCTCGCAAACCCCAATTTTCTTCCTCTTCGTCCTCCTCCACAATTCGCCCTCAATCCCCCAACCGC
TTAGATACAGAGAGCGCTCAAATTGTTCATCTCTTTAATCAACTCTTTGTTGGAGATTCTCATTGTGTCGTCAACGATAGTTGCGGCGACGGAGATGAGGACCTG
GTTCTTGTTAACCATACTTACGATGAATCGGTACCGGACTCTTCTTACGCTATTTTCCAGAGTATTCCTGTGGATGTTATCGATAGCAGTCACGTTCCGATTAAG
CGGCGTAGAGGACGACCGCGGAAGGATAGTAATCGGTTTGTTCAGAGTAATGGAAATGCGGCTCCGGAATTCAAAAGCGGATGCGATAAACCGGCGGCGGCGGCA
AAGGAGGAGATCGTAATGGATCATAGTTCTTTTGGTGCTCAGGCAGACGAGGGCGGAAATGTAGACTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRFSSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPNR
LDTESAQIVHLFNQLFVGDSHCVVNDSCGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHVPIKRRRGRPRKDSNRFVQSNGNAAPEFKSGCDKPAAAA
KEEIVMDHSSFGAQADEGGNVD

Chy3G063430 (gene) of Cucumber (hystrix) v1 genome