; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy3G067100 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy3G067100
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionRNA-binding protein 48
Genome locationchrH03:18774330..18781101
RNA-Seq ExpressionChy3G067100
SyntenyChy3G067100
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0005750 - mitochondrial respiratory chain complex III (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR020101 - Cytochrome b-c1 complex subunit 8, plants
IPR035979 - RNA-binding domain superfamily
IPR036642 - Cytochrome b-c1 complex subunit 8 superfamily
IPR039599 - RNA-binding protein 48


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142975.1 RNA-binding protein 48 isoform X2 [Cucumis sativus]1.34e-13497.57Show/hide
Query:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RYLIVRNVPALGCGDDLHKLFSSYGNLE+CKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
Subjt:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSRM
        LDSGRPRG+AVSSTTAKLTN SRSHYTLKQKNSLEKRNYGDAALIS+PHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGP SKKSRM
Subjt:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSRM

Query:  DNRRRI
        DNRRRI
Subjt:  DNRRRI

XP_008444339.1 PREDICTED: RNA-binding protein 48 isoform X1 [Cucumis melo]1.11e-13094.66Show/hide
Query:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RYLIVRNVPALGCGD LHKLFSSYGNLE+CKPMDAEECDEFTDVYFVKFH VTNARFAKRKLDEFVFLGNRLQVSYAPEFESL+DTKEKLEVRRREVLAR
Subjt:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSRM
        LDSGRPRGSAVSSTTAKLTNPSRS+YTL+QKNSLE RNYGDAALIS PHVSQ+TRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGP SKKSR+
Subjt:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSRM

Query:  DNRRRI
        DNRRRI
Subjt:  DNRRRI

XP_011649485.1 RNA-binding protein 48 isoform X1 [Cucumis sativus]9.27e-13397.1Show/hide
Query:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RYLIVRNVPALGCGDDLHKLFSSYGNLE+CKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
Subjt:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEK-RNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSR
        LDSGRPRG+AVSSTTAKLTN SRSHYTLKQKNSLEK RNYGDAALIS+PHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGP SKKSR
Subjt:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEK-RNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSR

Query:  MDNRRRI
        MDNRRRI
Subjt:  MDNRRRI

XP_022997621.1 RNA-binding protein 48 isoform X1 [Cucurbita maxima]2.01e-12691.26Show/hide
Query:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RYLIVRNVPALGCGD+L KLFSSYGNLE+CKPMDAEECDEFTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLAR
Subjt:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSRM
        LDSGRPRGSAV+S T K TNPS SHYTL+QKNSLEKRNYGDAAL S+PHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQS SEHL+AGP SK+SR+
Subjt:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSRM

Query:  DNRRRI
        DNRRRI
Subjt:  DNRRRI

XP_038884635.1 RNA-binding protein 48 isoform X1 [Benincasa hispida]6.37e-13094.17Show/hide
Query:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RYL+VRNVPALGCGDDL KLFSSYGNLE+CKPMDAEECDEFTDVYFVKFHLVT+ARFAKRKLDEFVFLGNRLQVSYAPEFESLLDT+EKLEVRRREVLAR
Subjt:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSRM
        LDSGRPRGSAVSSTTAK TNPSRSHYTL+QKNSLE RNYGD  LIS+PHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGP SKKSRM
Subjt:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSRM

Query:  DNRRRI
        DNRRRI
Subjt:  DNRRRI

TrEMBL top hitse value%identityAlignment
A0A0A0LQL2 RNA-binding protein 484.0e-10797.57Show/hide
Query:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RYLIVRNVPALGCGDDLHKLFSSYGNLE+CKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
Subjt:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSRM
        LDSGRPRG+AVSSTTAKLTN SRSHYTLKQKNSLEKRNYGDAALIS+PHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGP SKKSRM
Subjt:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSRM

Query:  DNRRRI
        DNRRRI
Subjt:  DNRRRI

A0A1S3BA34 RNA-binding protein 489.3e-10494.66Show/hide
Query:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RYLIVRNVPALGCGD LHKLFSSYGNLE+CKPMDAEECDEFTDVYFVKFH VTNARFAKRKLDEFVFLGNRLQVSYAPEFESL+DTKEKLEVRRREVLAR
Subjt:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSRM
        LDSGRPRGSAVSSTTAKLTNPSRS+YTL+QKNSLE RNYGDAALIS PHVSQ+TRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGP SKKSR+
Subjt:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSRM

Query:  DNRRRI
        DNRRRI
Subjt:  DNRRRI

A0A5A7V5K4 RNA-binding protein 489.3e-10494.66Show/hide
Query:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RYLIVRNVPALGCGD LHKLFSSYGNLE+CKPMDAEECDEFTDVYFVKFH VTNARFAKRKLDEFVFLGNRLQVSYAPEFESL+DTKEKLEVRRREVLAR
Subjt:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSRM
        LDSGRPRGSAVSSTTAKLTNPSRS+YTL+QKNSLE RNYGDAALIS PHVSQ+TRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGP SKKSR+
Subjt:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSRM

Query:  DNRRRI
        DNRRRI
Subjt:  DNRRRI

A0A6J1HAQ6 RNA-binding protein 482.4e-9990.29Show/hide
Query:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RYLIVRNVPALGCGD+L KLFSSYGNLE+CKPMDAEECDEFTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLAR
Subjt:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSRM
        L+SGRPRGSAV+S T K TNPS SHYTL+QK+SLEKRNYGDAAL S+PHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQS SEHL+AGP SK+SR+
Subjt:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSRM

Query:  DNRRRI
        DNRRRI
Subjt:  DNRRRI

A0A6J1K7Z4 RNA-binding protein 481.6e-10091.26Show/hide
Query:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RYLIVRNVPALGCGD+L KLFSSYGNLE+CKPMDAEECDEFTDVYFVKFHLV+NARFAKRKLDEFVFLGNRLQVSYAP+FESLLDTKEKLEVRRREVLAR
Subjt:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSRM
        LDSGRPRGSAV+S T K TNPS SHYTL+QKNSLEKRNYGDAAL S+PHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQS SEHL+AGP SK+SR+
Subjt:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSRM

Query:  DNRRRI
        DNRRRI
Subjt:  DNRRRI

SwissProt top hitse value%identityAlignment
A4FVJ7 RNA-binding protein 483.6e-2032.72Show/hide
Query:  TTNPTHRYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR
        T N   RYL+V+ VPA+G   +L +LF+ YG +E+ +P+D    ++FT+VY ++F  +T+AR AKR  DE  F G +L V YAPE+E++ +TK+KL+ RR
Subjt:  TTNPTHRYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR

Query:  REV------LARLDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKR------NYGDAALISHPHVSQITRVSSDQDYFASESMNQ-TVHLVREKLDK
        R V       A+L S   + + V++ ++  T+   +   + QKN  E R      +Y    L+  P  + I+     Q++F   S  Q T     +K+  
Subjt:  REV------LARLDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKR------NYGDAALISHPHVSQITRVSSDQDYFASESMNQ-TVHLVREKLDK

Query:  IQSSSEHLQAGPTSKKS
        + +    +Q   T  +S
Subjt:  IQSSSEHLQAGPTSKKS

P46269 Cytochrome b-c1 complex subunit 82.0e-2672.22Show/hide
Query:  MGKQPVRMKAVIYALSPFQQKIMSGLWNDLSGKIHHKISENWISAALLITPVVGSYTYVQQYKEKEKLSHSF
        MGKQPV++KAV+YA+SPFQQKIM GLW DL GKIHHK+SENWISA LL+ P+VG+Y+YVQ + EKEKL H +
Subjt:  MGKQPVRMKAVIYALSPFQQKIMSGLWNDLSGKIHHKISENWISAALLITPVVGSYTYVQQYKEKEKLSHSF

Q5R4U2 RNA-binding protein 488.8e-1934.39Show/hide
Query:  TTNPTHRYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR
        T N   +YL+++ VPA+G   +L + F+ YG +EQ   +D    ++FT+VY +KF  + +AR AKRK+DE  F G  L V YAPEFE++ +T++KL+VR+
Subjt:  TTNPTHRYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRR

Query:  REVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVS
          V+                    T  ++ HY  K+K   E ++  D     H  +S
Subjt:  REVLARLDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVS

Q9FLB7 Cytochrome b-c1 complex subunit 8-2, mitochondrial3.4e-2672.22Show/hide
Query:  MGKQPVRMKAVIYALSPFQQKIMSGLWNDLSGKIHHKISENWISAALLITPVVGSYTYVQQYKEKEKLSHSF
        MGKQPV++KAV+YALSPFQQKIM+GLW DL  KIHHK+SENWIS  LL+ PVVG+Y+Y Q +KE+EKL H F
Subjt:  MGKQPVRMKAVIYALSPFQQKIMSGLWNDLSGKIHHKISENWISAALLITPVVGSYTYVQQYKEKEKLSHSF

Q9SG91 Cytochrome b-c1 complex subunit 8-1, mitochondrial5.2e-2775Show/hide
Query:  MGKQPVRMKAVIYALSPFQQKIMSGLWNDLSGKIHHKISENWISAALLITPVVGSYTYVQQYKEKEKLSHSF
        MGKQPV++KAV+YALSPFQQKIM+GLW DL  KIHHK+SENWISA LL+TPVVG+Y Y Q +KE+EKL H F
Subjt:  MGKQPVRMKAVIYALSPFQQKIMSGLWNDLSGKIHHKISENWISAALLITPVVGSYTYVQQYKEKEKLSHSF

Arabidopsis top hitse value%identityAlignment
AT2G27790.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-5551.95Show/hide
Query:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RY+IVRNVPALGCGDDL +LF +YG +E+CKPMDAE+C EFTDVY++KF L+TNARFAKRKLDE  FLGNRLQ+SYAPE+E++ DTK+KLE RR+EVLAR
Subjt:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSAVSSTTAKLTNP--SRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTS---
        L+   P+    +S   KL  P  +++     Q+  +E +         H   + +TRVSSDQ+YFAS SMNQTV  VREKL+KI+ S    +  P+S   
Subjt:  LDSGRPRGSAVSSTTAKLTNP--SRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTS---

Query:  --------------------KKSRMDNRRRI
                            K++R+DNRRRI
Subjt:  --------------------KKSRMDNRRRI

AT2G27790.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-5551.95Show/hide
Query:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RY+IVRNVPALGCGDDL +LF +YG +E+CKPMDAE+C EFTDVY++KF L+TNARFAKRKLDE  FLGNRLQ+SYAPE+E++ DTK+KLE RR+EVLAR
Subjt:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSAVSSTTAKLTNP--SRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTS---
        L+   P+    +S   KL  P  +++     Q+  +E +         H   + +TRVSSDQ+YFAS SMNQTV  VREKL+KI+ S    +  P+S   
Subjt:  LDSGRPRGSAVSSTTAKLTNP--SRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTS---

Query:  --------------------KKSRMDNRRRI
                            K++R+DNRRRI
Subjt:  --------------------KKSRMDNRRRI

AT3G10860.1 Cytochrome b-c1 complex, subunit 8 protein3.7e-2875Show/hide
Query:  MGKQPVRMKAVIYALSPFQQKIMSGLWNDLSGKIHHKISENWISAALLITPVVGSYTYVQQYKEKEKLSHSF
        MGKQPV++KAV+YALSPFQQKIM+GLW DL  KIHHK+SENWISA LL+TPVVG+Y Y Q +KE+EKL H F
Subjt:  MGKQPVRMKAVIYALSPFQQKIMSGLWNDLSGKIHHKISENWISAALLITPVVGSYTYVQQYKEKEKLSHSF

AT5G27300.1 pentatricopeptide (PPR) repeat-containing protein3.3e-5355.19Show/hide
Query:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RY+IVRNVPALGCGDDL +LF +YG +E+CKPMDAE+C EFTDVY++KF L+TNA    RKLDE  FLGNRLQ+SYAPE+ES+ DTKEKLE RR+EVLAR
Subjt:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTS-----
        L+   P  +  +S   KL  P+     L Q ++   R   +     H   + +TRVSS Q+YFAS SMNQ V  VREKL+KI+ S    +  P+S     
Subjt:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTS-----

Query:  -KKSRMDNRRRI
         K++R+DNRRRI
Subjt:  -KKSRMDNRRRI

AT5G27300.2 pentatricopeptide (PPR) repeat-containing protein3.3e-5355.19Show/hide
Query:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR
        RY+IVRNVPALGCGDDL +LF +YG +E+CKPMDAE+C EFTDVY++KF L+TNA    RKLDE  FLGNRLQ+SYAPE+ES+ DTKEKLE RR+EVLAR
Subjt:  RYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLAR

Query:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTS-----
        L+   P  +  +S   KL  P+     L Q ++   R   +     H   + +TRVSS Q+YFAS SMNQ V  VREKL+KI+ S    +  P+S     
Subjt:  LDSGRPRGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTS-----

Query:  -KKSRMDNRRRI
         K++R+DNRRRI
Subjt:  -KKSRMDNRRRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGCAACCGGTCCGGATGAAGGCTGTGATCTACGCTTTATCGCCATTCCAGCAGAAGATCATGTCAGGGTTATGGAATGACTTGTCCGGCAAGATTCACCATAA
GATCTCCGAGAACTGGATCAGTGCCGCCCTTCTAATTACCCCTGTCGTCGGCTCCTACACGTACGTACAGCAGTACAAGGAGAAGGAAAAGTTGTCTCACAGTTTTGGAA
TTTTTTGTGTAGATGCCACACACCTTCATCGATGGATCCCTTATTCCTTCAATCATCTCGAGTTGGACGCCGTAGCCTCAAGCCAAGCATCTGATCTGAATTTGACGACA
AATCCGACCCACAGGTATTTGATTGTGAGGAACGTCCCAGCATTGGGTTGTGGAGATGACTTGCACAAACTGTTCTCCTCCTACGGGAACCTTGAACAGTGTAAACCCAT
GGATGCAGAAGAATGTGATGAATTCACAGACGTTTATTTTGTCAAATTTCATTTGGTTACCAATGCCAGGTTTGCAAAAAGAAAATTGGATGAGTTTGTTTTCCTCGGTA
ATCGGCTCCAAGTCTCTTATGCGCCTGAGTTTGAAAGCTTGCTTGATACAAAGGAAAAGCTGGAAGTTAGGAGACGAGAAGTTTTAGCACGATTGGATTCTGGCAGACCA
AGAGGATCTGCAGTTAGTTCAACAACCGCAAAACTTACAAATCCATCTCGCTCTCATTATACTCTTAAACAGAAGAACTCCCTTGAAAAGAGGAATTATGGAGACGCAGC
ACTCATTTCCCATCCCCATGTTTCTCAAATAACAAGAGTTTCCTCTGACCAGGATTACTTCGCATCTGAATCTATGAATCAAACTGTGCATCTCGTCAGGGAAAAGCTTG
ATAAGATTCAATCAAGCAGCGAACATCTGCAAGCTGGACCCACGAGCAAGAAATCACGTATGGACAATAGGAGGAGAATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGCAACCGGTCCGGATGAAGGCTGTGATCTACGCTTTATCGCCATTCCAGCAGAAGATCATGTCAGGGTTATGGAATGACTTGTCCGGCAAGATTCACCATAA
GATCTCCGAGAACTGGATCAGTGCCGCCCTTCTAATTACCCCTGTCGTCGGCTCCTACACGTACGTACAGCAGTACAAGGAGAAGGAAAAGTTGTCTCACAGTTTTGGAA
TTTTTTGTGTAGATGCCACACACCTTCATCGATGGATCCCTTATTCCTTCAATCATCTCGAGTTGGACGCCGTAGCCTCAAGCCAAGCATCTGATCTGAATTTGACGACA
AATCCGACCCACAGGTATTTGATTGTGAGGAACGTCCCAGCATTGGGTTGTGGAGATGACTTGCACAAACTGTTCTCCTCCTACGGGAACCTTGAACAGTGTAAACCCAT
GGATGCAGAAGAATGTGATGAATTCACAGACGTTTATTTTGTCAAATTTCATTTGGTTACCAATGCCAGGTTTGCAAAAAGAAAATTGGATGAGTTTGTTTTCCTCGGTA
ATCGGCTCCAAGTCTCTTATGCGCCTGAGTTTGAAAGCTTGCTTGATACAAAGGAAAAGCTGGAAGTTAGGAGACGAGAAGTTTTAGCACGATTGGATTCTGGCAGACCA
AGAGGATCTGCAGTTAGTTCAACAACCGCAAAACTTACAAATCCATCTCGCTCTCATTATACTCTTAAACAGAAGAACTCCCTTGAAAAGAGGAATTATGGAGACGCAGC
ACTCATTTCCCATCCCCATGTTTCTCAAATAACAAGAGTTTCCTCTGACCAGGATTACTTCGCATCTGAATCTATGAATCAAACTGTGCATCTCGTCAGGGAAAAGCTTG
ATAAGATTCAATCAAGCAGCGAACATCTGCAAGCTGGACCCACGAGCAAGAAATCACGTATGGACAATAGGAGGAGAATCTAA
Protein sequenceShow/hide protein sequence
MGKQPVRMKAVIYALSPFQQKIMSGLWNDLSGKIHHKISENWISAALLITPVVGSYTYVQQYKEKEKLSHSFGIFCVDATHLHRWIPYSFNHLELDAVASSQASDLNLTT
NPTHRYLIVRNVPALGCGDDLHKLFSSYGNLEQCKPMDAEECDEFTDVYFVKFHLVTNARFAKRKLDEFVFLGNRLQVSYAPEFESLLDTKEKLEVRRREVLARLDSGRP
RGSAVSSTTAKLTNPSRSHYTLKQKNSLEKRNYGDAALISHPHVSQITRVSSDQDYFASESMNQTVHLVREKLDKIQSSSEHLQAGPTSKKSRMDNRRRI