; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy4G068340 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G068340
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionprotein SAMBA isoform X1
Genome locationchrH04:1040053..1042105
RNA-Seq ExpressionChy4G068340
SyntenyChy4G068340
Gene Ontology termsGO:0046621 - negative regulation of organ growth (biological process)
GO:0010997 - anaphase-promoting complex binding (molecular function)
InterPro domainsIPR037547 - Protein SAMBA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136197.1 protein SAMBA isoform X1 [Cucumis sativus]8.16e-7399.12Show/hide
Query:  MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS
        MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS
Subjt:  MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS

Query:  SKRQKTKEGNGSD
        SKRQK KEGNGSD
Subjt:  SKRQKTKEGNGSD

XP_008466002.1 PREDICTED: uncharacterized protein LOC103503566 isoform X1 [Cucumis melo]7.85e-7196.46Show/hide
Query:  MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS
        MNTPSPANSS STTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQV LS
Subjt:  MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS

Query:  SKRQKTKEGNGSD
        SKR K KEGNGSD
Subjt:  SKRQKTKEGNGSD

XP_022131247.1 protein SAMBA isoform X1 [Momordica charantia]1.21e-6588.5Show/hide
Query:  MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS
        MN+ SPANSS+STTAVAGRCSTNAA+S+DDFRFP+NLIS+PERKDEAM+ALKSNIMAALNKEVKSLDDD+WMFEGPRSRINLMSRQGANC+AIPYQVVLS
Subjt:  MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS

Query:  SKRQKTKEGNGSD
        SKRQK +E NGSD
Subjt:  SKRQKTKEGNGSD

XP_023553751.1 protein SAMBA isoform X1 [Cucurbita pepo subsp. pepo]3.32e-6386.49Show/hide
Query:  MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS
        MNT SPANSS+STT VAGRC+TNAA+SLDDFRFP+NL+S+ ERKDEAM+ALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQV++S
Subjt:  MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS

Query:  SKRQKTKEGNG
        SKRQK K+ NG
Subjt:  SKRQKTKEGNG

XP_038888367.1 protein SAMBA isoform X1 [Benincasa hispida]1.07e-6892.92Show/hide
Query:  MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS
        MNT SPANSS+STTAVAGRCSTNAA+SLDDFRFP+NLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMS+QGANCHAIPYQVV+S
Subjt:  MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS

Query:  SKRQKTKEGNGSD
        SKRQK KE NGSD
Subjt:  SKRQKTKEGNGSD

TrEMBL top hitse value%identityAlignment
A0A0A0LK11 Uncharacterized protein3.7e-39100Show/hide
Query:  MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQG
        MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQG
Subjt:  MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQG

A0A1S3CQ80 uncharacterized protein LOC103503566 isoform X13.5e-5396.46Show/hide
Query:  MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS
        MNTPSPANSS STTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQV LS
Subjt:  MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS

Query:  SKRQKTKEGNGSD
        SKR K KEGNGSD
Subjt:  SKRQKTKEGNGSD

A0A6J1BQF8 protein SAMBA isoform X13.1e-4988.5Show/hide
Query:  MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS
        MN+ SPANSS+STTAVAGRCSTNAA+S+DDFRFP+NLIS+PERKDEAM+ALKSNIMAALNKEVKSLDDD+WMFEGPRSRINLMSRQGANC+AIPYQVVLS
Subjt:  MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS

Query:  SKRQKTKEGNGSD
        SKRQK +E NGSD
Subjt:  SKRQKTKEGNGSD

A0A6J1HIC3 protein SAMBA isoform X18.3e-4785.59Show/hide
Query:  MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS
        MNT SPANSS+STT VAGRC+TNAA+SLDDFRFP+NL+S+ ERKDEAM+ALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQV++S
Subjt:  MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS

Query:  SKRQKTKEGNG
        SKRQK K+ +G
Subjt:  SKRQKTKEGNG

A0A6J1HU80 protein SAMBA isoform X13.5e-4584.68Show/hide
Query:  MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS
        M T SPANSS+STT VAGRC+TNAA+SLDDFRFP+NL+S+ ERKDEAM+ALKSNIMAALNKEVKSLDDDNWMFEGPRSRINL SRQGANCHAIPYQVV+S
Subjt:  MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLS

Query:  SKRQKTKEGNG
        SKR K K+ NG
Subjt:  SKRQKTKEGNG

SwissProt top hitse value%identityAlignment
Q9C613 Protein SAMBA6.8e-2263.64Show/hide
Query:  MNTPSPANSSVSTTAVA-GRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQG
        MN  SPA+S VSTTAVA G  S+ AA  LDDF FP ++ S+ ERKDEAM  LK+++M  L+KEVKSL++D+WMFEGPRSRI+L+SR+G
Subjt:  MNTPSPANSSVSTTAVA-GRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQG

Arabidopsis top hitse value%identityAlignment
AT1G32310.1 unknown protein4.8e-2363.64Show/hide
Query:  MNTPSPANSSVSTTAVA-GRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQG
        MN  SPA+S VSTTAVA G  S+ AA  LDDF FP ++ S+ ERKDEAM  LK+++M  L+KEVKSL++D+WMFEGPRSRI+L+SR+G
Subjt:  MNTPSPANSSVSTTAVA-GRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATACCCCGTCCCCGGCCAATTCTTCCGTTTCCACCACGGCGGTTGCCGGAAGGTGTAGCACTAACGCCGCACTGTCGCTTGACGATTTTCGCTTTCCCTCCAATTT
AATTTCCGTGCCAGAGCGCAAGGACGAGGCCATGACCGCTCTTAAATCTAATATAATGGCTGCACTGAATAAGGAGGTCAAATCCCTAGATGATGATAACTGGATGTTTG
AAGGTCCTCGCTCCCGTATCAACCTTATGTCACGACAAGGTGCTAATTGCCATGCAATTCCCTATCAGGTGGTGCTTTCCTCAAAAAGACAGAAGACAAAAGAAGGTAAT
GGATCAGATCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATACCCCGTCCCCGGCCAATTCTTCCGTTTCCACCACGGCGGTTGCCGGAAGGTGTAGCACTAACGCCGCACTGTCGCTTGACGATTTTCGCTTTCCCTCCAATTT
AATTTCCGTGCCAGAGCGCAAGGACGAGGCCATGACCGCTCTTAAATCTAATATAATGGCTGCACTGAATAAGGAGGTCAAATCCCTAGATGATGATAACTGGATGTTTG
AAGGTCCTCGCTCCCGTATCAACCTTATGTCACGACAAGGTGCTAATTGCCATGCAATTCCCTATCAGGTGGTGCTTTCCTCAAAAAGACAGAAGACAAAAGAAGGTAAT
GGATCAGATCGATGA
Protein sequenceShow/hide protein sequence
MNTPSPANSSVSTTAVAGRCSTNAALSLDDFRFPSNLISVPERKDEAMTALKSNIMAALNKEVKSLDDDNWMFEGPRSRINLMSRQGANCHAIPYQVVLSSKRQKTKEGN
GSDR