; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy4G070500 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G070500
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionE3 ubiquitin-protein ligase MIEL1 isoform X2
Genome locationchrH04:2956809..2957254
RNA-Seq ExpressionChy4G070500
SyntenyChy4G070500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038782.1 E3 ubiquitin-protein ligase MIEL1 isoform X2 [Cucumis melo var. makuwa]3.52e-0646.74Show/hide
Query:  VAHGSKITRAVGAVFSVIFSGLDSLGYIYSIPPVERSATQIVQFTLEAKSSDSSHFISSPSLSSEPFASSCTLPSGTIFSMLAVTGYDHLEE
        V HGSKI RAVGAVFS     L S+G+I         AT      L+           SPSLSSEPFASSC L SGTIF  LA  G   +++
Subjt:  VAHGSKITRAVGAVFSVIFSGLDSLGYIYSIPPVERSATQIVQFTLEAKSSDSSHFISSPSLSSEPFASSCTLPSGTIFSMLAVTGYDHLEE
TrEMBL top hitse value%identityAlignment
A0A5D3E656 E3 ubiquitin-protein ligase MIEL1 isoform X21.4e-0446.74Show/hide
Query:  VAHGSKITRAVGAVFSVIFSGLDSLGYIYSIPPVERSATQIVQFTLEAKSSDSSHFISSPSLSSEPFASSCTLPSGTIFSMLAVTGYDHLEE
        V HGSKI RAVGAV    FS L S+G+I         AT      L+           SPSLSSEPFASSC L SGTIF  LA  G   +++
Subjt:  VAHGSKITRAVGAVFSVIFSGLDSLGYIYSIPPVERSATQIVQFTLEAKSSDSSHFISSPSLSSEPFASSCTLPSGTIFSMLAVTGYDHLEE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTGGGTGATGTTGAATGCCGGATTCTTGTCTTGACCCTTTCTAAATCTGGAGTATTGGCAGTGGCTCATGGTAGCAAGATTACAAGAGCTGTAGGGGCGGTCTT
TAGCGTTATATTCAGTGGACTGGATAGCCTTGGGTACATATATTCTATTCCTCCAGTTGAAAGATCAGCTACGCAAATTGTGCAATTCACCCTAGAAGCCAAAAGTTCAG
ATTCCTCTCATTTTATCAGTTCTCCTTCTCTCTCCAGTGAACCTTTTGCTTCCTCTTGCACGTTGCCCTCTGGAACAATTTTCAGTATGCTGGCAGTTACTGGGTACGAC
CACCTTGAAGAAGAGCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTGGGTGATGTTGAATGCCGGATTCTTGTCTTGACCCTTTCTAAATCTGGAGTATTGGCAGTGGCTCATGGTAGCAAGATTACAAGAGCTGTAGGGGCGGTCTT
TAGCGTTATATTCAGTGGACTGGATAGCCTTGGGTACATATATTCTATTCCTCCAGTTGAAAGATCAGCTACGCAAATTGTGCAATTCACCCTAGAAGCCAAAAGTTCAG
ATTCCTCTCATTTTATCAGTTCTCCTTCTCTCTCCAGTGAACCTTTTGCTTCCTCTTGCACGTTGCCCTCTGGAACAATTTTCAGTATGCTGGCAGTTACTGGGTACGAC
CACCTTGAAGAAGAGCTGTAG
Protein sequenceShow/hide protein sequence
MLLGDVECRILVLTLSKSGVLAVAHGSKITRAVGAVFSVIFSGLDSLGYIYSIPPVERSATQIVQFTLEAKSSDSSHFISSPSLSSEPFASSCTLPSGTIFSMLAVTGYD
HLEEEL