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Chy4G070510 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G070510
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchrH04:2966003..2970396
RNA-Seq ExpressionChy4G070510
SyntenyChy4G070510
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038783.1 uncharacterized protein E6C27_scaffold92G003370 [Cucumis melo var. makuwa]1.42e-0741.53Show/hide
Query:  RVPNFQLNPVTFDHGMSLGNCIQRGKGLENLSDSGLGQPVHLDTNVQLKDNVLFYPQYKIREFEKDEIQLIGTKGGKNMGNIPLSMVVLWMLKAEVLERG
        RVPNFQLNPVTFDHGM L NC+QRGKGL         QP+      Q            +  F+  E  LIG                            
Subjt:  RVPNFQLNPVTFDHGMSLGNCIQRGKGLENLSDSGLGQPVHLDTNVQLKDNVLFYPQYKIREFEKDEIQLIGTKGGKNMGNIPLSMVVLWMLKAEVLERG

Query:  KSKEVMVEERAGKEIVEL
          KEVMVEERAGKEIVEL
Subjt:  KSKEVMVEERAGKEIVEL

KGN60270.2 hypothetical protein Csa_001570 [Cucumis sativus]4.52e-11879.68Show/hide
Query:  RVPNFQLNPVTFDHGMSLGNCIQRGKGLENLSDSGLGQPVHLDTNVQLKDNVLFYPQYKIREFEKDEIQLIGTKGGKNMGNIPLSMVVLWMLKAEVLERG
        RVPNFQLNPVTFDHGM L NC+QRGKGLENLSDSGL QPVHLDTNVQLKDNVLFY QYKIREFEKDEIQLIG KGGKNMGNIPLSMVVLWMLKAEVL+RG
Subjt:  RVPNFQLNPVTFDHGMSLGNCIQRGKGLENLSDSGLGQPVHLDTNVQLKDNVLFYPQYKIREFEKDEIQLIGTKGGKNMGNIPLSMVVLWMLKAEVLERG

Query:  KSKEVMVEERAGKEIVELEKLADSDSLFCISLSAINLELISPRDYKEKLPSNTTVCRDYFILCTCCDYKTSTKHVGNKHRNCSILSVWVAVSNFA--GAL
        KSKEVMVEERAGKEIVELEKLADSDSLFCIS S INLELI PRDYKEKLPSNTTVCRDYFIL     +  + KH     RN    S      +F   G+L
Subjt:  KSKEVMVEERAGKEIVELEKLADSDSLFCISLSAINLELISPRDYKEKLPSNTTVCRDYFILCTCCDYKTSTKHVGNKHRNCSILSVWVAVSNFA--GAL

Query:  GIVR-------GTHCTVRATISEYMAVKGLWLLMHPRVNVATSLGQSLLYS
           R       GTHCTV ATISEYMAVKGLWLLMHPRVNVATSLGQSLLYS
Subjt:  GIVR-------GTHCTVRATISEYMAVKGLWLLMHPRVNVATSLGQSLLYS

TYK31403.1 uncharacterized protein E5676_scaffold455G007110 [Cucumis melo var. makuwa]1.42e-0741.53Show/hide
Query:  RVPNFQLNPVTFDHGMSLGNCIQRGKGLENLSDSGLGQPVHLDTNVQLKDNVLFYPQYKIREFEKDEIQLIGTKGGKNMGNIPLSMVVLWMLKAEVLERG
        RVPNFQLNPVTFDHGM L NC+QRGKGL         QP+      Q            +  F+  E  LIG                            
Subjt:  RVPNFQLNPVTFDHGMSLGNCIQRGKGLENLSDSGLGQPVHLDTNVQLKDNVLFYPQYKIREFEKDEIQLIGTKGGKNMGNIPLSMVVLWMLKAEVLERG

Query:  KSKEVMVEERAGKEIVEL
          KEVMVEERAGKEIVEL
Subjt:  KSKEVMVEERAGKEIVEL

XP_011652505.1 uncharacterized protein LOC101215653 [Cucumis sativus]8.54e-2691.53Show/hide
Query:  RVPNFQLNPVTFDHGMSLGNCIQRGKGLENLSDSGLGQPVHLDTNVQLKDNVLFYPQYK
        RVPNFQLNPVTFDHGM L NC+QRGKGLENLSDSGL QPVHLDTNVQLKDNVLFY QYK
Subjt:  RVPNFQLNPVTFDHGMSLGNCIQRGKGLENLSDSGLGQPVHLDTNVQLKDNVLFYPQYK

XP_038898352.1 uncharacterized protein LOC120086027 [Benincasa hispida]1.46e-1567.8Show/hide
Query:  RVPNFQLNPVTFDHGMSLGNCIQRGKGLENLSDSGLGQPVHLDTNVQLKDNVLFYPQYK
        RVPNFQ NP+  DHGM   NCIQRGKGLENLSDSGL Q ++LDTN QL+D  L  P+Y+
Subjt:  RVPNFQLNPVTFDHGMSLGNCIQRGKGLENLSDSGLGQPVHLDTNVQLKDNVLFYPQYK

TrEMBL top hitse value%identityAlignment
A0A0A0LEE7 SWIM-type domain-containing protein4.7e-2391.53Show/hide
Query:  RVPNFQLNPVTFDHGMSLGNCIQRGKGLENLSDSGLGQPVHLDTNVQLKDNVLFYPQYK
        RVPNFQLNPVTFDHGM L NC+QRGKGLENLSDSGL QPVHLDTNVQLKDNVLFY QYK
Subjt:  RVPNFQLNPVTFDHGMSLGNCIQRGKGLENLSDSGLGQPVHLDTNVQLKDNVLFYPQYK

A0A0A0LGQ8 Uncharacterized protein7.4e-3761.05Show/hide
Query:  KSKEVMVEERAGKEIVE---------------------LEKLADSDSLFCISLSAINLELISPRDYKEKLPSNTTVCRDYFILCTCCDYKTSTKHVGNKH
        + KEVMVEERAGKEIVE                     LEKLADSDSLFCIS S INLELI PRDYKEKLPSNTTVCRDYFIL     +  + KH     
Subjt:  KSKEVMVEERAGKEIVE---------------------LEKLADSDSLFCISLSAINLELISPRDYKEKLPSNTTVCRDYFILCTCCDYKTSTKHVGNKH

Query:  RNCSILSVWVAVSNF--AGALGIV-------RGTHCTVRATISEYMAVKGLWLLMHPRVNVATSLGQSLLYS
        RN    S      +F   G+L          RGTHCTV ATISEYMAVKGLWLLMHPRVNVATSLGQSLLYS
Subjt:  RNCSILSVWVAVSNF--AGALGIV-------RGTHCTVRATISEYMAVKGLWLLMHPRVNVATSLGQSLLYS

A0A5A7T754 SWIM-type domain-containing protein2.0e-0589.29Show/hide
Query:  RVPNFQLNPVTFDHGMSLGNCIQRGKGL
        RVPNFQLNPVTFDHGM L NC+QRGKGL
Subjt:  RVPNFQLNPVTFDHGMSLGNCIQRGKGL

A0A5D3E5J2 SWIM-type domain-containing protein2.0e-0589.29Show/hide
Query:  RVPNFQLNPVTFDHGMSLGNCIQRGKGL
        RVPNFQLNPVTFDHGM L NC+QRGKGL
Subjt:  RVPNFQLNPVTFDHGMSLGNCIQRGKGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGTGTTCCAAACTTTCAGCTCAACCCTGTTACTTTTGACCATGGAATGTCACTTGGCAATTGCATACAACGAGGAAAAGGCTTGGAGAACTTGTCAGATAGCGGCTTGGG
CCAGCCCGTACATCTTGATACTAATGTCCAATTGAAAGATAACGTTCTCTTTTATCCCCAATACAAGATTCGTGAGTTTGAGAAGGATGAAATACAGCTGATAGGTACCA
AAGGTGGAAAAAACATGGGCAACATTCCTCTATCCATGGTGGTGTTATGGATGCTGAAAGCTGAAGTGCTGGAAAGGGGAAAAAGTAAGGAGGTGATGGTGGAGGAGAGG
GCGGGGAAGGAGATAGTCGAGCTTGAGAAGCTTGCAGACAGTGACAGCTTATTCTGTATCTCATTGAGCGCAATCAACTTGGAACTGATCTCCCCCCGAGATTATAAAGA
AAAACTGCCATCGAATACAACTGTTTGTCGGGATTACTTCATTCTGTGTACATGTTGCGACTATAAAACATCCACGAAACATGTTGGCAACAAGCACAGAAACTGTTCCA
TTCTTTCTGTATGGGTGGCAGTCTCAAATTTTGCAGGAGCGCTAGGGATCGTGAGGGGAACGCATTGCACTGTGAGGGCTACCATTTCTGAGTACATGGCAGTTAAAGGA
CTCTGGTTGTTAATGCATCCACGAGTCAATGTGGCAACTTCTTTAGGTCAGTCACTTCTCTACTCTACTAA
mRNA sequenceShow/hide mRNA sequence
CGTGTTCCAAACTTTCAGCTCAACCCTGTTACTTTTGACCATGGAATGTCACTTGGCAATTGCATACAACGAGGAAAAGGCTTGGAGAACTTGTCAGATAGCGGCTTGGG
CCAGCCCGTACATCTTGATACTAATGTCCAATTGAAAGATAACGTTCTCTTTTATCCCCAATACAAGATTCGTGAGTTTGAGAAGGATGAAATACAGCTGATAGGTACCA
AAGGTGGAAAAAACATGGGCAACATTCCTCTATCCATGGTGGTGTTATGGATGCTGAAAGCTGAAGTGCTGGAAAGGGGAAAAAGTAAGGAGGTGATGGTGGAGGAGAGG
GCGGGGAAGGAGATAGTCGAGCTTGAGAAGCTTGCAGACAGTGACAGCTTATTCTGTATCTCATTGAGCGCAATCAACTTGGAACTGATCTCCCCCCGAGATTATAAAGA
AAAACTGCCATCGAATACAACTGTTTGTCGGGATTACTTCATTCTGTGTACATGTTGCGACTATAAAACATCCACGAAACATGTTGGCAACAAGCACAGAAACTGTTCCA
TTCTTTCTGTATGGGTGGCAGTCTCAAATTTTGCAGGAGCGCTAGGGATCGTGAGGGGAACGCATTGCACTGTGAGGGCTACCATTTCTGAGTACATGGCAGTTAAAGGA
CTCTGGTTGTTAATGCATCCACGAGTCAATGTGGCAACTTCTTTAGGTCAGTCACTTCTCTACTCTACTAA
Protein sequenceShow/hide protein sequence
RVPNFQLNPVTFDHGMSLGNCIQRGKGLENLSDSGLGQPVHLDTNVQLKDNVLFYPQYKIREFEKDEIQLIGTKGGKNMGNIPLSMVVLWMLKAEVLERGKSKEVMVEER
AGKEIVELEKLADSDSLFCISLSAINLELISPRDYKEKLPSNTTVCRDYFILCTCCDYKTSTKHVGNKHRNCSILSVWVAVSNFAGALGIVRGTHCTVRATISEYMAVKG
LWLLMHPRVNVATSLGQSLLYSTX