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Chy4G072010 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G072010
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Description50S ribosomal protein L31
Genome locationchrH04:4627921..4628419
RNA-Seq ExpressionChy4G072010
SyntenyChy4G072010
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002150 - Ribosomal protein L31
IPR034704 - L28p-like
IPR042105 - Ribosomal protein L31 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041569.1 50S ribosomal protein L31 [Cucumis melo var. makuwa]4.21e-8797.01Show/hide
Query:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQR I PAVAPPK KESGAR HRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
        RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK

XP_004147854.2 50S ribosomal protein L31, chloroplastic [Cucumis sativus]1.03e-8797.01Show/hide
Query:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQR I PAVAPPKRKESGAR +RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
        RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK

XP_008466538.1 PREDICTED: 50S ribosomal protein L31, chloroplastic [Cucumis melo]1.80e-8797.01Show/hide
Query:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQR I PAVAPPK KESGAR HRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
        RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK

XP_022975559.1 50S ribosomal protein L31, chloroplastic-like [Cucurbita maxima]2.00e-7890.37Show/hide
Query:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQ  R I P VAPPK+KE GAR HR VVTCRKKDLHPQF+EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKSA-KGKKK
        RKKFGELSQLMEIPVLKGEIILP+KRKS  KGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKSA-KGKKK

XP_038896266.1 50S ribosomal protein L31, chloroplastic [Benincasa hispida]6.53e-8391.79Show/hide
Query:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQR    AVAPPK KESGAR HRPVVTCRKKDLHPQFYED+KVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
        RKKFGELSQLMEIPVLKGEI+LP+K+KS KGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK

TrEMBL top hitse value%identityAlignment
A0A0A0LDC9 50S ribosomal protein L313.8e-6797.01Show/hide
Query:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQR I PAVAPPKRKESGAR +RPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
        RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK

A0A1S3CRJ2 50S ribosomal protein L31, chloroplastic2.9e-6797.01Show/hide
Query:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQR I PAVAPPK KESGAR HRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
        RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK

A0A5A7TJN6 50S ribosomal protein L31, chloroplastic2.9e-6797.01Show/hide
Query:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQR I PAVAPPK KESGAR HRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
        RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK

A0A6J1J0F9 50S ribosomal protein L31, chloroplastic1.6e-6089.63Show/hide
Query:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSF  LQRS  PA+APPK KE GAR +RPVVTCRKKD+HPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKS-AKGKKK
        RKKFGELSQLMEIPVLKGEI+LP+KRKS  KGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKS-AKGKKK

E5GCI4 50S ribosomal protein L31, chloroplastic2.9e-6797.01Show/hide
Query:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSFLQLQR I PAVAPPK KESGAR HRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
        RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK

SwissProt top hitse value%identityAlignment
P82249 50S ribosomal protein L31, chloroplastic1.1e-4467.91Show/hide
Query:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        M L L+N FL    +    +  PK   S     RP  +CRK D+HP+F EDAKVYCNGELVMTTGGTQK+Y+V+VWSGNHPFYLG+RSALL+DADQVEKF
Subjt:  MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK
        RKK+GEL+Q+MEIPVLKGEIILP K+KS K KKK
Subjt:  RKKFGELSQLMEIPVLKGEIILPSKRKSAKGKKK

Q31L35 50S ribosomal protein L312.7e-1758.82Show/hide
Query:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL
        K D+HPQ+Y +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   ++D + +VE+F +K+G L
Subjt:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL

Q5N0T7 50S ribosomal protein L312.7e-1758.82Show/hide
Query:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL
        K D+HPQ+Y +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   ++D + +VE+F +K+G L
Subjt:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL

Q7V9Y9 50S ribosomal protein L313.5e-1758.46Show/hide
Query:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFG
        KKD+HP +Y DAKV CNGE+VMTTG TQ E  VDVWSGNHPF+ G++  L  +  +V++F +K+G
Subjt:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFG

Q9FWS4 50S ribosomal protein L31, chloroplastic3.9e-4566.67Show/hide
Query:  MALNLTNSFLQLQRSI------HPAVAPPK-RKESGARCHRPVV--TCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL
        MA++L NSFLQ+   +       P +A  K  K+S  R    VV  TCRKK+LHP+F+EDAKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSAL+
Subjt:  MALNLTNSFLQLQRSI------HPAVAPPK-RKESGARCHRPVV--TCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL

Query:  VDADQVEKFRKKFGELSQLMEIPVLKGEIILPSKR-KSAKGKKK
        VDADQVEKFRK+F  LS++MEIPVLKGEII+P+K+ K  KGKKK
Subjt:  VDADQVEKFRKKFGELSQLMEIPVLKGEIILPSKR-KSAKGKKK

Arabidopsis top hitse value%identityAlignment
AT1G75350.1 Ribosomal protein L312.8e-4666.67Show/hide
Query:  MALNLTNSFLQLQRSI------HPAVAPPK-RKESGARCHRPVV--TCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL
        MA++L NSFLQ+   +       P +A  K  K+S  R    VV  TCRKK+LHP+F+EDAKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSAL+
Subjt:  MALNLTNSFLQLQRSI------HPAVAPPK-RKESGARCHRPVV--TCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL

Query:  VDADQVEKFRKKFGELSQLMEIPVLKGEIILPSKR-KSAKGKKK
        VDADQVEKFRK+F  LS++MEIPVLKGEII+P+K+ K  KGKKK
Subjt:  VDADQVEKFRKKFGELSQLMEIPVLKGEIILPSKR-KSAKGKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTCAACCTAACAAATTCCTTCCTTCAACTTCAACGCTCAATTCACCCCGCCGTTGCACCGCCCAAGCGCAAGGAATCTGGAGCTAGATGTCACCGGCCGGTGGT
GACCTGCCGGAAAAAGGATCTGCACCCCCAATTTTACGAGGATGCTAAGGTTTATTGCAACGGAGAATTAGTTATGACGACCGGCGGGACCCAGAAAGAGTATTCTGTGG
ACGTGTGGTCGGGAAACCACCCGTTCTATTTGGGAAGCCGATCCGCCCTGCTCGTCGACGCCGATCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTGTCGCAGTTG
ATGGAGATTCCTGTTCTTAAGGGCGAAATCATTCTGCCCTCAAAGCGTAAATCCGCAAAAGGGAAGAAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTCAACCTAACAAATTCCTTCCTTCAACTTCAACGCTCAATTCACCCCGCCGTTGCACCGCCCAAGCGCAAGGAATCTGGAGCTAGATGTCACCGGCCGGTGGT
GACCTGCCGGAAAAAGGATCTGCACCCCCAATTTTACGAGGATGCTAAGGTTTATTGCAACGGAGAATTAGTTATGACGACCGGCGGGACCCAGAAAGAGTATTCTGTGG
ACGTGTGGTCGGGAAACCACCCGTTCTATTTGGGAAGCCGATCCGCCCTGCTCGTCGACGCCGATCAGGTCGAGAAATTCCGCAAGAAATTCGGAGAGCTGTCGCAGTTG
ATGGAGATTCCTGTTCTTAAGGGCGAAATCATTCTGCCCTCAAAGCGTAAATCCGCAAAAGGGAAGAAGAAGTAG
Protein sequenceShow/hide protein sequence
MALNLTNSFLQLQRSIHPAVAPPKRKESGARCHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQL
MEIPVLKGEIILPSKRKSAKGKKK