; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy4G072060 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G072060
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionDNA polymerase epsilon catalytic subunit A, putative
Genome locationchrH04:4681581..4682308
RNA-Seq ExpressionChy4G072060
SyntenyChy4G072060
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147861.1 uncharacterized protein LOC101222738 [Cucumis sativus]1.60e-9897.92Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLEKPEKNP
        MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEK N+GNNLQRSASMPPFNTRKGL ENMKSETNLEKPEKNP
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLEKPEKNP

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

XP_008466545.1 PREDICTED: uncharacterized protein LOC103503930 [Cucumis melo]4.76e-10099.31Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLEKPEKNP
        MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLEN+KSETNLEKPEKNP
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLEKPEKNP

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

XP_022940046.1 uncharacterized protein LOC111445795 [Cucurbita moschata]3.01e-7680.82Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEE-KEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLE-KPEK
        MGSLMAGWDSP +DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPF++ EE K+ E  GNNLQRS+S+PPFNTRKG L+ M+SE +L+ KP+K
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEE-KEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLE-KPEK

Query:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGGV A
Subjt:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

XP_022982140.1 uncharacterized protein LOC111481065 [Cucurbita maxima]7.40e-7781.51Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEE-KEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLE-KPEK
        MGSLMAGWDSP +DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPF++ EE K+ E  GNNLQRS+S+PPFNTRKGLL+ M+SE +L+ KP+K
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEE-KEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLE-KPEK

Query:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGGV A
Subjt:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

XP_038898962.1 uncharacterized protein LOC120086405 [Benincasa hispida]1.13e-8489.58Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLEKPEKNP
        MGSLMAGWDSP TDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFET EEK+ EN G NLQRSAS+PPF T KGLLE M+SE NLEKP+KN 
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLEKPEKNP

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLG GGVSA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

TrEMBL top hitse value%identityAlignment
A0A0A0LDC2 Uncharacterized protein1.2e-7497.92Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLEKPEKNP
        MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEK N+GNNLQRSASMPPFNTRKGL ENMKSETNLEKPEKNP
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLEKPEKNP

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

A0A1S3CST6 uncharacterized protein LOC1035039308.2e-7699.31Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLEKPEKNP
        MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLEN+KSETNLEKPEKNP
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLEKPEKNP

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

A0A5D3D820 Putative DNA polymerase epsilon catalytic subunit A8.2e-7699.31Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLEKPEKNP
        MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLEN+KSETNLEKPEKNP
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLEKPEKNP

Query:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
Subjt:  WWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

A0A6J1FHE8 uncharacterized protein LOC1114457951.0e-5780.82Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEE-KEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLE-KPEK
        MGSLMAGWDSP +DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPF++ EE K+ E  GNNLQRS+S+PPFNTRKG L+ M+SE +L+ KP+K
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEE-KEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLE-KPEK

Query:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGGV A
Subjt:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

A0A6J1J1T2 uncharacterized protein LOC1114810653.5e-5881.51Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEE-KEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLE-KPEK
        MGSLMAGWDSP +DP+EVSHRRNKSLTKEEIEAFWKTKKQ+HEEHLRAILSPF++ EE K+ E  GNNLQRS+S+PPFNTRKGLL+ M+SE +L+ KP+K
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEE-KEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLE-KPEK

Query:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA
        N WWRRSNWAFLNEPP  EGSGNSYVSQFHVAN+AASRLGRGGV A
Subjt:  NPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19530.1 unknown protein6.3e-2044.2Show/hide
Query:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLE-----EKEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLEK
        MGSLM+GWDS   DP+ V  RR KSLT+EEI+ FWKTKK+  EE      S   T E      KEK++V +                L EN    +    
Subjt:  MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLE-----EKEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLEK

Query:  PEKNPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMA
             WWR++ WAFLNEP E EG  N+YVSQF VA++A
Subjt:  PEKNPWWRRSNWAFLNEPPETEGSGNSYVSQFHVANMA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTTTAATGGCTGGTTGGGATTCCCCTACTACTGATCCCCAAGAAGTGAGTCATCGGAGGAACAAGTCGTTGACAAAAGAGGAAATTGAAGCGTTTTGG
AAAACGAAGAAACAAGTGCATGAAGAACATCTGAGAGCAATTTTAAGTCCATTTGAGACATTGGAGGAAAAAGAAAAGGAAAATGTTGGAAATAATCTACAGAGA
TCAGCGTCTATGCCTCCATTCAATACAAGGAAGGGTTTACTGGAGAATATGAAATCTGAAACTAACTTAGAAAAGCCCGAGAAAAATCCCTGGTGGAGAAGAAGT
AACTGGGCGTTTCTAAACGAACCACCGGAGACAGAAGGGTCCGGTAACAGCTACGTGTCGCAGTTCCACGTCGCAAACATGGCGGCTTCCAGACTTGGTCGTGGT
GGCGTCAGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCTTTAATGGCTGGTTGGGATTCCCCTACTACTGATCCCCAAGAAGTGAGTCATCGGAGGAACAAGTCGTTGACAAAAGAGGAAATTGAAGCGTTTTGG
AAAACGAAGAAACAAGTGCATGAAGAACATCTGAGAGCAATTTTAAGTCCATTTGAGACATTGGAGGAAAAAGAAAAGGAAAATGTTGGAAATAATCTACAGAGA
TCAGCGTCTATGCCTCCATTCAATACAAGGAAGGGTTTACTGGAGAATATGAAATCTGAAACTAACTTAGAAAAGCCCGAGAAAAATCCCTGGTGGAGAAGAAGT
AACTGGGCGTTTCTAAACGAACCACCGGAGACAGAAGGGTCCGGTAACAGCTACGTGTCGCAGTTCCACGTCGCAAACATGGCGGCTTCCAGACTTGGTCGTGGT
GGCGTCAGTGCTTAA
Protein sequenceShow/hide protein sequence
MGSLMAGWDSPTTDPQEVSHRRNKSLTKEEIEAFWKTKKQVHEEHLRAILSPFETLEEKEKENVGNNLQRSASMPPFNTRKGLLENMKSETNLEKPEKNPWWRRS
NWAFLNEPPETEGSGNSYVSQFHVANMAASRLGRGGVSA