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Chy4G073170 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G073170
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionDynein light chain
Genome locationchrH04:6622142..6622880
RNA-Seq ExpressionChy4G073170
SyntenyChy4G073170
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607846.1 hypothetical protein SDJN03_01188, partial [Cucurbita argyrosperma subsp. sororia]5.12e-5888.46Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQLP
        MLEGKAIVGETDML+AMQQDAL+LAAKALD FDVTEATDIARFIKKEFDR HG GWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS A QQ   P
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQLP

Query:  DPAH
         P H
Subjt:  DPAH

XP_004146843.1 dynein light chain 2, cytoplasmic [Cucumis sativus]5.65e-7495.69Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQ-L
        MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHG GWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQ  
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQ-L

Query:  PDPAHHFSLMDNTLKP
        P+P HHFSLMDNTLKP
Subjt:  PDPAHHFSLMDNTLKP

XP_008454627.1 PREDICTED: dynein light chain LC6, flagellar outer arm [Cucumis melo]2.91e-6789.74Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQL-
        MLEGKAI+GETDMLEAMQQDALNLA+KALDSFDVTEATDIARFIKKEFDR +G GWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGSAASQ+QQL 
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQL-

Query:  PDPA-HHFSLMDNTLKP
        PDP+ HHFSL+D TLKP
Subjt:  PDPA-HHFSLMDNTLKP

XP_022139644.1 dynein light chain LC6, flagellar outer arm [Momordica charantia]4.96e-5880.91Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQLP
        MLEGKAI+GETDML+ MQQDAL+LAAKALDSFDVTEATDIARFIKKEFDRIHG GWQCIVGTDFGSFVTHCFGCFIYFCVG+LA+LLFRGSA  QQ +  
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQLP

Query:  DPAHHFSLMD
         P   F+ ++
Subjt:  DPAHHFSLMD

XP_038899068.1 dynein light chain 2, cytoplasmic [Benincasa hispida]9.92e-6385.96Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQLP
        MLEGKAI+GETDML+AMQQDALNLAAKALDSFDVTEATDIARFIKKEFD+I+G GWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAAS+++Q P
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQLP

Query:  DPAHHFSLMDNTLK
         P   FS+M+ TLK
Subjt:  DPAHHFSLMDNTLK

TrEMBL top hitse value%identityAlignment
A0A0A0LIK5 Dynein light chain3.5e-4594.85Show/hide
Query:  DALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAAS-QQQQLPDPAHHFSLMDNTLKP
        DALNLAAKALDSFDVTEATDIARFIKKEFDRIHG GWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAAS QQQQ P+P HHFSLMDNTLKP
Subjt:  DALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAAS-QQQQLPDPAHHFSLMDNTLKP

A0A1S3BZU7 Dynein light chain1.6e-5089.74Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQL-
        MLEGKAI+GETDMLEAMQQDALNLA+KALDSFDVTEATDIARFIKKEFDR +G GWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGSAASQ+QQL 
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQL-

Query:  PDPA-HHFSLMDNTLKP
        PDP+ HHFSL+D TLKP
Subjt:  PDPA-HHFSLMDNTLKP

A0A5A7T1H5 Dynein light chain1.6e-5089.74Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQL-
        MLEGKAI+GETDMLEAMQQDALNLA+KALDSFDVTEATDIARFIKKEFDR +G GWQCIVGTDFGSFVTHCFGCFIYFCVGSLA+LLFRGSAASQ+QQL 
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQL-

Query:  PDPA-HHFSLMDNTLKP
        PDP+ HHFSL+D TLKP
Subjt:  PDPA-HHFSLMDNTLKP

A0A6J1FSQ1 Dynein light chain1.9e-4388.46Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQLP
        MLEGKAIVGETDML+AMQQDAL+LAAKALD FDVTEATDIARFIKKEFDR HG GWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS A QQ   P
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQLP

Query:  DPAH
         P H
Subjt:  DPAH

A0A6J1J2G7 Dynein light chain1.9e-4388.46Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQLP
        MLEGKAIVGETDML+AMQQDAL+LAAKALD FDVTEATDIARFIKKEFDR HG GWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS A QQ   P
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQLP

Query:  DPAH
         P H
Subjt:  DPAH

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm5.1e-1750.56Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M E KA++   DM E MQQDA++ A +AL+ F++ +  DIA +IKKEFD+ +   W CIVG +FGS+VTH    FIYF +G +A+LLF+
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

O96860 Dynein light chain 2, cytoplasmic5.1e-1750.56Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M + KA++   DM E MQQDA++ A +AL+ +++ +  DIA FIKKEFD+ +   W CIVG +FGS+VTH    FIYF +G +AILLF+
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

Q22799 Dynein light chain 1, cytoplasmic1.1e-1648.31Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M++ KA++   DM + MQQDA++ A +AL+ +++ +  DIA +IKKEFD+ +   W CIVG +FGS+VTH    FIYF +G +AILLF+
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

Q24117 Dynein light chain 1, cytoplasmic1.1e-1649.44Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M + KA++   DM E MQQDA++ A +AL+ +++ +  DIA +IKKEFD+ +   W CIVG +FGS+VTH    FIYF +G +AILLF+
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

Q39580 Dynein 8 kDa light chain, flagellar outer arm1.1e-1651.76Show/hide
Query:  KAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        KA++   DM E MQ DA++ A +AL+ +++ +  DIA +IKKEFDR H   W CIVG +FGS+VTH    FIYF +G +AILLF+
Subjt:  KAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

Arabidopsis top hitse value%identityAlignment
AT1G52240.2 RHO guanyl-nucleotide exchange factor 113.5e-2152.17Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSA
        MLEGKA+V ++DM   MQ  A+  A++ALD FDV +   IA  IKKEFD  +G GWQC+VG++FG F TH  G FIYF + +L  L+F+G++
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSA

AT3G16120.1 Dynein light chain type 1 family protein4.9e-2356.04Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS
        MLEGKA V ETDM   MQ  A+ +A+++LD FDV ++  IA  IKKEFD  +G GWQC+VGT+FG F TH  G FIYF +G+L  L+F+G+
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS

AT4G15930.1 Dynein light chain type 1 family protein4.9e-1544.71Show/hide
Query:  KAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        +A++   DM + MQ++A+ +A  A + + V +  DIA  IKKEFD+ HG  W CIVG +FGS+VTH    F+YF +   A+LLF+
Subjt:  KAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

AT4G27360.1 Dynein light chain type 1 family protein1.5e-3575.82Show/hide
Query:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS
        MLEGKA++G+TDM + M++DAL+LA+KALD FDVTE T IARFIKKEFDR +G GWQCIVGT FGSFVTHC GCFI+F VGSL ILLF+GS
Subjt:  MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS

AT5G20110.1 Dynein light chain type 1 family protein2.4e-1448.72Show/hide
Query:  DMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        DM   MQ  A   A   LDS +   +  +A  +KKEFD+ +G  W CIVG+ FGSFVTH  GCFIYF +  L +LLF+
Subjt:  DMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGAAGGGAAAGCAATCGTCGGAGAAACGGATATGTTGGAGGCCATGCAACAGGATGCTTTGAACCTTGCAGCTAAGGCACTTGATAGTTTTGATGTCACT
GAAGCCACTGACATCGCCCGTTTCATTAAAAAGGAATTTGACAGAATACATGGAGAAGGATGGCAATGCATAGTGGGGACAGATTTTGGATCATTTGTGACACAT
TGTTTTGGATGCTTCATTTATTTTTGTGTTGGAAGTCTTGCAATTTTACTCTTTAGGGGTTCTGCTGCCTCACAACAACAACAATTACCTGACCCTGCTCATCAC
TTTTCTCTTATGGACAATACTCTCAAACCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGAAGGGAAAGCAATCGTCGGAGAAACGGATATGTTGGAGGCCATGCAACAGGATGCTTTGAACCTTGCAGCTAAGGCACTTGATAGTTTTGATGTCACT
GAAGCCACTGACATCGCCCGTTTCATTAAAAAGGAATTTGACAGAATACATGGAGAAGGATGGCAATGCATAGTGGGGACAGATTTTGGATCATTTGTGACACAT
TGTTTTGGATGCTTCATTTATTTTTGTGTTGGAAGTCTTGCAATTTTACTCTTTAGGGGTTCTGCTGCCTCACAACAACAACAATTACCTGACCCTGCTCATCAC
TTTTCTCTTATGGACAATACTCTCAAACCATGA
Protein sequenceShow/hide protein sequence
MLEGKAIVGETDMLEAMQQDALNLAAKALDSFDVTEATDIARFIKKEFDRIHGEGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAASQQQQLPDPAHH
FSLMDNTLKP