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Chy4G073230 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G073230
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionGTPase IMAP family member 1, putative
Genome locationchrH04:6709233..6719009
RNA-Seq ExpressionChy4G073230
SyntenyChy4G073230
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651492.1 hypothetical protein Csa_019452 [Cucumis sativus]4.17e-1146.67Show/hide
Query:  WSSIVAVWFRQTCGGVRRSF-EVVAEMVEEWKEMIIGFCGSSAIGIATASIQTKTKLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSK
        W + ++  FR+  G V  SF EVVA+MVEE K  IIGF  +    IA  S+Q K KLP+SF+F+SI+ LLC +    A +I   FKT +K
Subjt:  WSSIVAVWFRQTCGGVRRSF-EVVAEMVEEWKEMIIGFCGSSAIGIATASIQTKTKLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSK

KAE8652531.1 hypothetical protein Csa_013077, partial [Cucumis sativus]1.47e-4580.61Show/hide
Query:  GGVRRSFEVVAEMVEEWKEMIIGFCGSSAIGIATASIQTKTKLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSKILYCFGGFLCATSCFVATAIPY
        GGVRRSFEV AEMVEEWK+MIIGFC SSAIGIAT S+  KT+LPNSFQ LSI+VLLCFV V FARMI SIF+TLSKILYC GG L A+SCF+ATAIPY
Subjt:  GGVRRSFEVVAEMVEEWKEMIIGFCGSSAIGIATASIQTKTKLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSKILYCFGGFLCATSCFVATAIPY

KAG6572911.1 hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]1.84e-2855.66Show/hide
Query:  GGVRRSFEVVAEMVEEWKEMIIGFCGSSAIGIATASIQTKTKLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSKILYCFGGFLCATSCFVATAIPYDD
        GG   +    AEMVEEWK+MI+ FC SSAI IAT S+Q + KLP  F FLS+++LLCF FV F +M  SI K +S+ILYC GG L  T+ F+A+AIPY  
Subjt:  GGVRRSFEVVAEMVEEWKEMIIGFCGSSAIGIATASIQTKTKLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSKILYCFGGFLCATSCFVATAIPYDD

Query:  THFRII
        ++F+II
Subjt:  THFRII

KAG6584385.1 hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia]2.17e-1345.26Show/hide
Query:  EMVEEWKEMIIGFCGSSAIGIATASIQTKTKLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSKILYCFGGFLCATSCFVATAIPYDDTHFRII
        EM+ +W+ M++ FC  +AI IAT S+Q +TKL   FQFLS +++ CF F   A++I    + +S ILY  GGF   T+ F+A AIPY   HF+I+
Subjt:  EMVEEWKEMIIGFCGSSAIGIATASIQTKTKLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSKILYCFGGFLCATSCFVATAIPYDDTHFRII

KGN60003.2 hypothetical protein Csa_000735, partial [Cucumis sativus]4.87e-4383.16Show/hide
Query:  MLGWWSSIVAVWFRQTCGGVRRSFEVVAEMVEEWKEMIIGFCGSSAIGIATASIQTKTKLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSKIL
        MLG  +  VAVWFRQT GGVRRS EVVAEMVEE KEMIIGFC SSAIGIAT S+QTKTKLPNSFQFLSI+VL+CF+ VGFARMI SIFKTLSKIL
Subjt:  MLGWWSSIVAVWFRQTCGGVRRSFEVVAEMVEEWKEMIIGFCGSSAIGIATASIQTKTKLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSKIL

TrEMBL top hitse value%identityAlignment
A0A0A0LCY2 Uncharacterized protein1.8e-4782.4Show/hide
Query:  MLGWWSSIVAVWFRQTCGGVRRSFEVVAEMVEEWKEMIIGFCGSSAIGIATASIQTKTKLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSKILYCFGG
        MLG  +  VAVWFRQT GGVRRS EVVAEMVEE KEMIIGFC SSAIGIAT S+QTKTKLPNSFQFLSI+VL+CF+ VGFARMI SIFKTLSKILYCFGG
Subjt:  MLGWWSSIVAVWFRQTCGGVRRSFEVVAEMVEEWKEMIIGFCGSSAIGIATASIQTKTKLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSKILYCFGG

Query:  FLCATSCFVATAIPYDDTHFRIIEV
        FLCAT CF+ATAIPY DTHF II +
Subjt:  FLCATSCFVATAIPYDDTHFRIIEV

A0A0A0LEV1 Uncharacterized protein7.6e-1451.02Show/hide
Query:  GGVRRSF-EVVAEMVEEWKEMIIGFCGSSAIGIATASIQTKTKLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSKILYCFGGFLCATSCFVATAIP
        G V  SF EVVA+MVEE K  IIGF  +    IA  S+Q K KLP+SF+F+SI+ LLC +    A +I   FKT +K+LY  G F C TS  +A AIP
Subjt:  GGVRRSF-EVVAEMVEEWKEMIIGFCGSSAIGIATASIQTKTKLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSKILYCFGGFLCATSCFVATAIP

A0A0A0LQB6 Uncharacterized protein1.9e-2565.38Show/hide
Query:  RSFEVVAEMVEEWKEMIIGFCGSSAIGIATASIQTKT--KLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSKILYCFGGFLCATSCFVATAIPYDDTH
        R   +VAEMVEEWKEMI+  C SSAIGIAT S+Q +T  +LP +FQFLSI VLLCF FVGFA+M   IFKT+SKILYC GGFL  T+ F+ATAIP+   +
Subjt:  RSFEVVAEMVEEWKEMIIGFCGSSAIGIATASIQTKT--KLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSKILYCFGGFLCATSCFVATAIPYDDTH

Query:  FRII
        F+II
Subjt:  FRII

A0A0A0LQP5 Uncharacterized protein9.8e-3858.23Show/hide
Query:  MLGWWSSIVAV--WFRQTCGGVRRSFEVVAEMVEEWKEMIIGFCGSSAIGIATASIQTKTKLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSKILYCF
        MLGW + IVAV  WFRQ   G RRS E+VAE VEE KE IIG C SSAIGI T S+Q KTKLPNSFQ LS+ +LLCFV V FARMI S+F+TLS+ILYC 
Subjt:  MLGWWSSIVAV--WFRQTCGGVRRSFEVVAEMVEEWKEMIIGFCGSSAIGIATASIQTKTKLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSKILYCF

Query:  GGFLCATSCFVATAIPYDDTHFRIIEVRSEKSFKNRVIDLTLHLVIIIIVGDNIIHSD
        G F+CAT+CF+ATAI YDD HF  I +         +  +   + II I+  +I H+D
Subjt:  GGFLCATSCFVATAIPYDDTHFRIIEVRSEKSFKNRVIDLTLHLVIIIIVGDNIIHSD

A0A0A0LSX4 Uncharacterized protein1.2e-3880.19Show/hide
Query:  AVWFRQTCGGVRRSFEVVAEMVEEWKEMIIGFCGSSAIGIATASIQTKTKLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSKILYCFGGFLCATSCFV
        AVWFRQ  GGVRRSFEV AEMVEEWK+MIIGFC SSAIGIAT S+  KT+LPNSFQ LSI+VLLCFV V FARMI SIF+TLSKILYC GG L A+SCF+
Subjt:  AVWFRQTCGGVRRSFEVVAEMVEEWKEMIIGFCGSSAIGIATASIQTKTKLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSKILYCFGGFLCATSCFV

Query:  ATAIPY
        ATAIPY
Subjt:  ATAIPY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGTTGGTGGTCTTCGATTGTGGCGGTTTGGTTTAGACAGACGTGCGGCGGAGTGAGGAGGAGTTTCGAAGTGGTGGCGGAGATGGTGGAGGAGTGGAAAGAAAT
GATTATAGGATTCTGTGGGTCATCGGCAATAGGAATAGCGACAGCGTCTATTCAAACCAAAACCAAGCTTCCAAATTCATTTCAGTTTCTATCCATTTCTGTTTTACTTT
GTTTTGTGTTTGTTGGATTTGCAAGGATGATCGGCTCCATTTTCAAGACACTTTCAAAGATTCTCTATTGTTTTGGTGGTTTCTTATGTGCCACAAGCTGTTTCGTTGCT
ACAGCCATCCCATATGATGACACGCATTTTCGTATCATTGAGGTAAGATCAGAGAAGAGCTTCAAGAATAGAGTCATAGATCTTACGCTCCATCTCGTGATAATAATAAT
TGTGGGGGATAATATTATTCATTCCGATGAAAAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGTTGGTGGTCTTCGATTGTGGCGGTTTGGTTTAGACAGACGTGCGGCGGAGTGAGGAGGAGTTTCGAAGTGGTGGCGGAGATGGTGGAGGAGTGGAAAGAAAT
GATTATAGGATTCTGTGGGTCATCGGCAATAGGAATAGCGACAGCGTCTATTCAAACCAAAACCAAGCTTCCAAATTCATTTCAGTTTCTATCCATTTCTGTTTTACTTT
GTTTTGTGTTTGTTGGATTTGCAAGGATGATCGGCTCCATTTTCAAGACACTTTCAAAGATTCTCTATTGTTTTGGTGGTTTCTTATGTGCCACAAGCTGTTTCGTTGCT
ACAGCCATCCCATATGATGACACGCATTTTCGTATCATTGAGGTAAGATCAGAGAAGAGCTTCAAGAATAGAGTCATAGATCTTACGCTCCATCTCGTGATAATAATAAT
TGTGGGGGATAATATTATTCATTCCGATGAAAAGAATTGA
Protein sequenceShow/hide protein sequence
MLGWWSSIVAVWFRQTCGGVRRSFEVVAEMVEEWKEMIIGFCGSSAIGIATASIQTKTKLPNSFQFLSISVLLCFVFVGFARMIGSIFKTLSKILYCFGGFLCATSCFVA
TAIPYDDTHFRIIEVRSEKSFKNRVIDLTLHLVIIIIVGDNIIHSDEKN