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Chy4G073530 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G073530
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionFBD-associated F-box protein
Genome locationchrH04:7249270..7251248
RNA-Seq ExpressionChy4G073530
SyntenyChy4G073530
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649006.1 hypothetical protein Csa_008454 [Cucumis sativus]1.21e-1564.06Show/hide
Query:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSSSEFVCENNATS
        DRIS LPDC+LH+ILSFL TK VV+TC LSK+WKTLWT IPTLNF+ +   S S F  E +  S
Subjt:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSSSEFVCENNATS

XP_004141639.1 F-box/LRR-repeat protein At3g26922 [Cucumis sativus]1.19e-1564.06Show/hide
Query:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSSSEFVCENNATS
        DRIS LPDC+LH+ILSFL TK VV+TC LSK+WKTLWT IPTLNF+ +   S S F  E +  S
Subjt:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSSSEFVCENNATS

XP_022141765.1 LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g56820, partial [Momordica charantia]6.67e-1551.81Show/hide
Query:  VDRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFP-------SSSEFVCENNATSFTLPPNAAHKC
        +DRIS LPD +LH ILS L T+QVV+TC LSK+WKTLWT IPTLNF+ D +P       SS+    E +   F L   + H C
Subjt:  VDRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFP-------SSSEFVCENNATSFTLPPNAAHKC

XP_022141791.1 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like [Momordica charantia]7.24e-1459.7Show/hide
Query:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFP--SSSEFVCENNATSF
        DRIS LPDC+L  ILS + TKQVV+TC LSK+WKTLWT IPTLNFN   +P    S   C +  +SF
Subjt:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFP--SSSEFVCENNATSF

XP_038890212.1 F-box/FBD/LRR-repeat protein At5g56420-like [Benincasa hispida]1.38e-1466.04Show/hide
Query:  DVDRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFP
        D+D IS LPD +LH+IL+ L+T+QVV+TC LSK+WK+LWTHIPTLNF+   FP
Subjt:  DVDRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFP

TrEMBL top hitse value%identityAlignment
A0A0A0KSW6 F-box domain-containing protein1.2e-1264.06Show/hide
Query:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSSSEFVCENNATS
        DRIS LPDC+LH+ILSFL TK VV+TC LSK+WKTLWT IPTLNF+ +   S S F  E +  S
Subjt:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSSSEFVCENNATS

A0A1S3CB41 F-box/LRR-repeat protein At3g26922-like isoform X11.2e-1067.86Show/hide
Query:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSSSEF
        DRIS LPD +LH ILS   TK VV+TC LSK+WKTLWT IPTLNF+ + F SSS F
Subjt:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSSSEF

A0A5A7TCF1 F-box/LRR-repeat protein1.2e-1067.86Show/hide
Query:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSSSEF
        DRIS LPD +LH ILS   TK VV+TC LSK+WKTLWT IPTLNF+ + F SSS F
Subjt:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSSSEF

A0A6J1CJ18 LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g568202.3e-1145.65Show/hide
Query:  VDRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSSSEFVCENNATSFTLPPNAAHKCYTTYDHLDTIHIVTIN
        +DRIS LPD +LH ILS L T+QVV+TC LSK+WKTLWT IPTLNF+ D +P        N++ S    P+               +I+T+N
Subjt:  VDRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSSSEFVCENNATSFTLPPNAAHKCYTTYDHLDTIHIVTIN

A0A6J1CKA9 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like4.0e-1159.7Show/hide
Query:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFP--SSSEFVCENNATSF
        DRIS LPDC+L  ILS + TKQVV+TC LSK+WKTLWT IPTLNFN   +P    S   C +  +SF
Subjt:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFP--SSSEFVCENNATSF

SwissProt top hitse value%identityAlignment
Q8LF09 F-box/FBD/LRR-repeat protein At4g001608.9e-0847.69Show/hide
Query:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSS-----SEFVCEN
        DRIS LPD +L  ILSFL TK VV T   SKQW+ LW  +P L F+ + +        SE VC++
Subjt:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSS-----SEFVCEN

Q9FNK0 Putative F-box/FBD/LRR-repeat protein At5g226101.2e-0749.12Show/hide
Query:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSSSEFV
        D IS LP+ +L  ILS+L TK +VRT  LSK+WK++W  IP L+ +   FP    FV
Subjt:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSSSEFV

Q9FWZ1 F-box/LRR-repeat protein 131.4e-0840.45Show/hide
Query:  DDVDRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNF-NCDF-----FPSSSEFVCENNATSFTLPPNAAHKCYTTYD
        D+VD IS LPDC+L ++L  L TK VV+T  LS++W+ LW H+P L+  N DF     F S  +   + N+ SF       + C   YD
Subjt:  DDVDRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNF-NCDF-----FPSSSEFVCENNATSFTLPPNAAHKCYTTYD

Q9FZ52 F-box/FBD/LRR-repeat protein At1g169301.4e-0850.88Show/hide
Query:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSSSEFV
        DRIS+LPD +L  ILS L TK+ V T  LSK+W+ LW H+P L+ + + FP    FV
Subjt:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSSSEFV

Q9LXJ6 F-box/FBD/LRR-repeat protein At3g526801.2e-0750Show/hide
Query:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSS----SEFVCEN
        DRIS LPD +L  ILS L T  VV T  LSKQW++LW  +P L F+ D + S     SE VC++
Subjt:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSS----SEFVCEN

Arabidopsis top hitse value%identityAlignment
AT1G16930.1 F-box/RNI-like/FBD-like domains-containing protein9.7e-1050.88Show/hide
Query:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSSSEFV
        DRIS+LPD +L  ILS L TK+ V T  LSK+W+ LW H+P L+ + + FP    FV
Subjt:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSSSEFV

AT1G69630.1 F-box/RNI-like superfamily protein9.7e-1040.45Show/hide
Query:  DDVDRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNF-NCDF-----FPSSSEFVCENNATSFTLPPNAAHKCYTTYD
        D+VD IS LPDC+L ++L  L TK VV+T  LS++W+ LW H+P L+  N DF     F S  +   + N+ SF       + C   YD
Subjt:  DDVDRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNF-NCDF-----FPSSSEFVCENNATSFTLPPNAAHKCYTTYD

AT3G52680.1 F-box/RNI-like/FBD-like domains-containing protein8.2e-0950Show/hide
Query:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSS----SEFVCEN
        DRIS LPD +L  ILS L T  VV T  LSKQW++LW  +P L F+ D + S     SE VC++
Subjt:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSS----SEFVCEN

AT3G52680.2 F-box/RNI-like/FBD-like domains-containing protein8.2e-0950Show/hide
Query:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSS----SEFVCEN
        DRIS LPD +L  ILS L T  VV T  LSKQW++LW  +P L F+ D + S     SE VC++
Subjt:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSS----SEFVCEN

AT4G00160.1 F-box/RNI-like/FBD-like domains-containing protein6.3e-0947.69Show/hide
Query:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSS-----SEFVCEN
        DRIS LPD +L  ILSFL TK VV T   SKQW+ LW  +P L F+ + +        SE VC++
Subjt:  DRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSS-----SEFVCEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTGTTCACAAAATTCTTCCAACAATATTTCTGATATCATCATGTCAATATACCAACACGATGATGTGGACAGAATCAGCAGTTTACCAGATTGTATTCTTCATGA
CATTCTATCCTTTTTAGAGACAAAACAAGTTGTTCGAACTTGTGATCTCTCAAAGCAATGGAAAACTCTGTGGACTCATATTCCCACACTCAACTTTAACTGTGATTTCT
TCCCTTCTTCTTCTGAGTTTGTGTGTGAAAATAATGCAACCTCCTTTACTCTACCTCCCAATGCAGCACATAAGTGTTACACTACATATGACCATTTGGATACGATACAT
ATTGTCACCATTAATGTGATGCGTGTTGTCTCCTTACATAAGCAAAAGATTAGATTTCATACATCGTATGTTTGTGATAAACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCCTGTTCACAAAATTCTTCCAACAATATTTCTGATATCATCATGTCAATATACCAACACGATGATGTGGACAGAATCAGCAGTTTACCAGATTGTATTCTTCATGA
CATTCTATCCTTTTTAGAGACAAAACAAGTTGTTCGAACTTGTGATCTCTCAAAGCAATGGAAAACTCTGTGGACTCATATTCCCACACTCAACTTTAACTGTGATTTCT
TCCCTTCTTCTTCTGAGTTTGTGTGTGAAAATAATGCAACCTCCTTTACTCTACCTCCCAATGCAGCACATAAGTGTTACACTACATATGACCATTTGGATACGATACAT
ATTGTCACCATTAATGTGATGCGTGTTGTCTCCTTACATAAGCAAAAGATTAGATTTCATACATCGTATGTTTGTGATAAACAATAA
Protein sequenceShow/hide protein sequence
MPCSQNSSNNISDIIMSIYQHDDVDRISSLPDCILHDILSFLETKQVVRTCDLSKQWKTLWTHIPTLNFNCDFFPSSSEFVCENNATSFTLPPNAAHKCYTTYDHLDTIH
IVTINVMRVVSLHKQKIRFHTSYVCDKQ