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Chy4G074800 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G074800
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionGermin-like protein
Genome locationchrH04:9693079..9696384
RNA-Seq ExpressionChy4G074800
SyntenyChy4G074800
Gene Ontology termsGO:0048046 - apoplast (cellular component)
GO:0030145 - manganese ion binding (molecular function)
InterPro domainsIPR006045 - Cupin 1
IPR011051 - RmlC-like cupin domain superfamily
IPR014710 - RmlC-like jelly roll fold
IPR019780 - Germin, manganese binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052481.1 germin-like protein subfamily 1 member 8 [Cucumis melo var. makuwa]7.40e-3681.93Show/hide
Query:  ANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVH-PRASELLIVLEGTLLVEFTKD
        ANVVADDFYF GILTPRSTDNPLGSNITSVNVETFPGLNTL +  G +DF  GGVNPPHVH PRASELL+VLEGTLLVE    
Subjt:  ANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVH-PRASELLIVLEGTLLVEFTKD

KGN58441.1 hypothetical protein Csa_001029 [Cucumis sativus]2.20e-3170.11Show/hide
Query:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVE
        MNGYACKSPANVVADDFYF GILTP STDNPLGS +                   H DF PGGVNPPHVHP+ASELLIVLEGTLLVE
Subjt:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVE

XP_023918134.1 germin-like protein subfamily 1 member 20 [Quercus suber]2.48e-2960.23Show/hide
Query:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF
        +NG  CK P     DDF F+G+  PR+T N LGSN+T VNV+ FPGLNTL I+  H D+ P G+NPPH+HPRAS+LL V+EGTLLV F
Subjt:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF

XP_030937532.1 germin-like protein subfamily 1 member 14 [Quercus lobata]4.43e-3062.5Show/hide
Query:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF
        +NG  CK P  V ADDFYF G+  PR+T N +GSN+T+VNV+TFPGLNTL IS    DF P G NPPH HPR +E+L+VLEGTL V F
Subjt:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF

XP_030940608.1 germin-like protein subfamily 1 member 14 [Quercus lobata]4.43e-3062.5Show/hide
Query:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF
        +NG  CK P  V ADDFYF G+  PR+T N +GSN+T+VNV+TFPGLNTL IS    DF P G NPPH HPR +E+L+VLEGTL V F
Subjt:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF

TrEMBL top hitse value%identityAlignment
A0A059CWT9 Germin-like protein1.1e-2257.45Show/hide
Query:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF-TKDEV
        +NG  CK P    ADDF F+G+  P +T NPLGS +T   V+ FPGLNTL IS    DF PGG+NPPH HPR +ELL+V+EGTLLV F T D++
Subjt:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF-TKDEV

A0A0A0LEC5 Cupin type-1 domain-containing protein5.9e-2470.11Show/hide
Query:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVE
        MNGYACKSPANVVADDFYF GILTP STDNPLGS +                   H DF PGGVNPPHVHP+ASELLIVLEGTLLVE
Subjt:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVE

A0A5A7UG45 Germin-like protein3.3e-2786.08Show/hide
Query:  ANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHV-HPRASELLIVLEGTLLVE
        ANVVADDFYF GILTPRSTDNPLGSNITSVNVETFPGLNTL +  G +DF  GGVNPPHV HPRASELL+VLEGTLLVE
Subjt:  ANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHV-HPRASELLIVLEGTLLVE

A0A7N2MQV7 Germin-like protein2.2e-2362.5Show/hide
Query:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF
        +NG  CK P  V ADDFYF G+  PR+T N +GSN+T+VNV+TFPGLNTL IS    DF P G NPPH HPR +E+L+VLEGTL V F
Subjt:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF

A0A7N2MRJ0 Germin-like protein2.2e-2362.5Show/hide
Query:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF
        +NG  CK P  V ADDFYF G+  PR+T N +GSN+T+VNV+TFPGLNTL IS    DF P G NPPH HPR +E+L+VLEGTL V F
Subjt:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF

SwissProt top hitse value%identityAlignment
P93000 Germin-like protein subfamily 2 member 32.8e-2357.3Show/hide
Query:  MNGYACKSPANVVADDFYFIGILTPRSTDN-PLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF
        +NGY CK PA V  +DFYFIG+ T  +T N  +GS +T  NVE  PGLNTL +S    D+ PGG+NPPH+HPRASE + VLEG L V F
Subjt:  MNGYACKSPANVVADDFYFIGILTPRSTDN-PLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF

Q6YZA9 Germin-like protein 8-23.1e-2253.4Show/hide
Query:  MNGYACKSPANVVADDFYFIGIL-TPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEFTKDEVMLRQLK
        +NG+ CK+P N  ADDF+   +L  PR T+N +GSN+T VNV   PGLNTL IS    DF P G+NPPH HPRA+E+  VLEGTL V F       R L 
Subjt:  MNGYACKSPANVVADDFYFIGIL-TPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEFTKDEVMLRQLK

Query:  LVL
         VL
Subjt:  LVL

Q6YZZ7 Germin-like protein 8-34.8e-2359.55Show/hide
Query:  MNGYACKSPANVVADDFYFIGIL-TPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF
        +NG+ CK+P NV +DDF+       PR+T N +GSN+T++NV  FPGLNTL IS    D+ P GVNPPHVHPRA+ELL VLEGTL V F
Subjt:  MNGYACKSPANVVADDFYFIGIL-TPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF

Q6ZCR3 Germin-like protein 8-121.4e-2258.43Show/hide
Query:  MNGYACKSPANVVADDFYFIGIL-TPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF
        +NG+ACK+P +V ++DF+       PR+T N LGSN+T++NV  FPGLNTL IS    D+ P GVNPPH+HPRA+ELL VLEGTL V F
Subjt:  MNGYACKSPANVVADDFYFIGIL-TPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF

Q7F731 Germin-like protein 1-12.0e-2456.82Show/hide
Query:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF
        +NG+ CK  ANV ADDF+F G+  P +T+NP GSN+T+ NV++FPG+NTL +S    D+ PGG NPPH HPRA+E++ VLEG L V F
Subjt:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF

Arabidopsis top hitse value%identityAlignment
AT3G05930.1 germin-like protein 82.0e-2457.3Show/hide
Query:  MNGYACKSPANVVADDFYFIGILTPRSTDN-PLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF
        +NGY CK PA V  +DFYFIG+ T  +T N  +GS +T  NVE  PGLNTL +S    D+ PGG+NPPH+HPRASE + VLEG L V F
Subjt:  MNGYACKSPANVVADDFYFIGILTPRSTDN-PLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF

AT3G05950.1 RmlC-like cupins superfamily protein6.5e-2355.68Show/hide
Query:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF
        +NG  CK P  V A+DF+  G+    +T N +GSN+T+VNV+  PGLNTL +S    DF PGG NPPH HPRA+E+L+V+EGTLLV F
Subjt:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF

AT5G39130.1 RmlC-like cupins superfamily protein8.4e-2353.41Show/hide
Query:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF
        +NG  CK P  V A DF+F G+  P +T+N +GSN+T+VNV+  PGLNT+ IS    D+ P G NPPH HPR SE+L+++EGTL V F
Subjt:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF

AT5G39160.1 RmlC-like cupins superfamily protein1.1e-2253.41Show/hide
Query:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF
        +NG  CK P  V A DF+F G+  P +T+N +GSN+T+VNV+  PGLNT+ IS    D+ P G NPPH HPR SE+L+++EGTL V F
Subjt:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF

AT5G39190.1 germin-like protein 28.4e-2353.41Show/hide
Query:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF
        +NG  CK P  V A DF+F G+  P +T+N +GSN+T+VNV+  PGLNT+ IS    D+ P G NPPH HPR SE+L+++EGTL V F
Subjt:  MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGGTTATGCCTGCAAGAGCCCTGCGAACGTCGTAGCAGATGACTTCTACTTTATCGGGATACTTACTCCGCGTAGCACAGATAACCCCCTAGGCTCGAACATTAC
ATCGGTGAACGTTGAGACGTTTCCTGGCCTCAACACTCTAAGCATCTCTACGGGACACAGTGACTTCCCACCCGGTGGTGTGAACCCTCCTCACGTGCACCCTCGAGCAT
CGGAGCTGTTGATTGTGCTTGAAGGAACCCTTTTGGTGGAGTTTACCAAGGATGAAGTAATGCTAAGACAACTGAAGCTGGTATTGAGACTTCAATTTCCTTACAATTGT
CGATATGCGCTGATCACCATTCACCAACAATGCCTCAGACATCAGTTCTCTGAAGAAGCAAGATCACTTCTGTCAGAATTCAGATTTATATTTGGCTGTGATTTATCACC
TGATGCCACCTCATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGGTTATGCCTGCAAGAGCCCTGCGAACGTCGTAGCAGATGACTTCTACTTTATCGGGATACTTACTCCGCGTAGCACAGATAACCCCCTAGGCTCGAACATTAC
ATCGGTGAACGTTGAGACGTTTCCTGGCCTCAACACTCTAAGCATCTCTACGGGACACAGTGACTTCCCACCCGGTGGTGTGAACCCTCCTCACGTGCACCCTCGAGCAT
CGGAGCTGTTGATTGTGCTTGAAGGAACCCTTTTGGTGGAGTTTACCAAGGATGAAGTAATGCTAAGACAACTGAAGCTGGTATTGAGACTTCAATTTCCTTACAATTGT
CGATATGCGCTGATCACCATTCACCAACAATGCCTCAGACATCAGTTCTCTGAAGAAGCAAGATCACTTCTGTCAGAATTCAGATTTATATTTGGCTGTGATTTATCACC
TGATGCCACCTCATTTTGA
Protein sequenceShow/hide protein sequence
MNGYACKSPANVVADDFYFIGILTPRSTDNPLGSNITSVNVETFPGLNTLSISTGHSDFPPGGVNPPHVHPRASELLIVLEGTLLVEFTKDEVMLRQLKLVLRLQFPYNC
RYALITIHQQCLRHQFSEEARSLLSEFRFIFGCDLSPDATSF