; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy4G074980 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G074980
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionSerine/arginine repetitive matrix protein 2, putative isoform 2
Genome locationchrH04:9973912..9995558
RNA-Seq ExpressionChy4G074980
SyntenyChy4G074980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646378.1 hypothetical protein Csa_015587 [Cucumis sativus]5.63e-4288.24Show/hide
Query:  PDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHEEG
        PDWL FV GASY VPLPSNSHLP IANVLRNLANPLSPE SLSTTT+ GW SSHYFIQGTHLPSLDP VDTT TECDASLDHEEG
Subjt:  PDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHEEG

KAG7018211.1 hypothetical protein SDJN02_20079, partial [Cucurbita argyrosperma subsp. argyrosperma]3.09e-3162.73Show/hide
Query:  SPSSQP*GRYSTHPRSPI-----CPDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTEC
        SPSS P  R        I      PDWL FV GASY VPLPS SHLP IAN+L N ANPLSPE SLSTTT+ GW SSH+FIQG HLPSL+P V+T   EC
Subjt:  SPSSQP*GRYSTHPRSPI-----CPDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTEC

Query:  DASL--DHEE
        +AS   DHEE
Subjt:  DASL--DHEE

XP_004135962.1 uncharacterized protein LOC101214133 [Cucumis sativus]2.39e-4288.24Show/hide
Query:  PDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHEEG
        PDWL FV GASY VPLPSNSHLP IANVLRNLANPLSPE SLSTTT+ GW SSHYFIQGTHLPSLDP VDTT TECDASLDHEEG
Subjt:  PDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHEEG

XP_008460271.1 PREDICTED: uncharacterized protein LOC103499150 isoform X1 [Cucumis melo]4.61e-3984.71Show/hide
Query:  PDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHEEG
        PDWL FV GASY VPLPSNSHLP IA+VLRNLANPLS E SLSTTT+ GW SSHYFIQGTHLPSLDP VDTT TECDASLD EEG
Subjt:  PDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHEEG

XP_022956127.1 uncharacterized protein LOC111457911 isoform X2 [Cucurbita moschata]3.09e-3162.73Show/hide
Query:  SPSSQP*GRYSTHPRSPI-----CPDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTEC
        SPSS P  R        I      PDWL FV GASY VPLPS SHLP IAN+L N ANPLSPE SLSTTT+ GW SSH+FIQG HLPSL+P V+T   EC
Subjt:  SPSSQP*GRYSTHPRSPI-----CPDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTEC

Query:  DASL--DHEE
        +AS   DHEE
Subjt:  DASL--DHEE

TrEMBL top hitse value%identityAlignment
A0A0A0K9L9 Uncharacterized protein2.0e-3488.24Show/hide
Query:  PDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHEEG
        PDWL FV GASY VPLPSNSHLP IANVLRNLANPLSPE SLSTTT+ GW SSHYFIQGTHLPSLDP VDTT TECDASLDHEEG
Subjt:  PDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHEEG

A0A1S3CC43 uncharacterized protein LOC103499150 isoform X17.2e-3284.71Show/hide
Query:  PDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHEEG
        PDWL FV GASY VPLPSNSHLP IA+VLRNLANPLS E SLSTTT+ GW SSHYFIQGTHLPSLDP VDTT TECDASLD EEG
Subjt:  PDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHEEG

A0A5A7VD84 Uncharacterized protein7.2e-3284.71Show/hide
Query:  PDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHEEG
        PDWL FV GASY VPLPSNSHLP IA+VLRNLANPLS E SLSTTT+ GW SSHYFIQGTHLPSLDP VDTT TECDASLD EEG
Subjt:  PDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHEEG

A0A6J1GVG9 uncharacterized protein LOC111457911 isoform X21.0e-2572.09Show/hide
Query:  PDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDAS--LDHEE
        PDWL FV GASY VPLPS SHLP IAN+L N ANPLSPE SLSTTT+ GW SSH+FIQG HLPSL+P V+T   EC+AS   DHEE
Subjt:  PDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDAS--LDHEE

A0A6J1J031 uncharacterized protein LOC111480015 isoform X22.9e-2571.76Show/hide
Query:  PDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDAS--LDHE
        PDWL FV GASY VPLPS SHLP IAN+L N ANPLSPE SLSTTT+ GW SSH+FIQG+HLPSL+P V+T   EC+AS   DHE
Subjt:  PDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDAS--LDHE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16840.1 unknown protein5.3e-1146.43Show/hide
Query:  PDWLSFVLGASYRVPLP-SNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHE
        PDWL FV GASY VP P S S    IA ++  LANPL+ E SLST +  GW SS YF++G     ++   +TT      S D E
Subjt:  PDWLSFVLGASYRVPLP-SNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHE

AT1G16840.2 unknown protein7.7e-1054.84Show/hide
Query:  PDWLSFVLGASYRVPLP-SNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTH
        PDWL FV GASY VP P S S    IA ++  LANPL+ E SLST +  GW SS YF++G++
Subjt:  PDWLSFVLGASYRVPLP-SNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTH

AT1G16840.3 unknown protein5.3e-1146.43Show/hide
Query:  PDWLSFVLGASYRVPLP-SNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHE
        PDWL FV GASY VP P S S    IA ++  LANPL+ E SLST +  GW SS YF++G     ++   +TT      S D E
Subjt:  PDWLSFVLGASYRVPLP-SNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHE

AT1G16840.4 unknown protein5.3e-1146.43Show/hide
Query:  PDWLSFVLGASYRVPLP-SNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHE
        PDWL FV GASY VP P S S    IA ++  LANPL+ E SLST +  GW SS YF++G     ++   +TT      S D E
Subjt:  PDWLSFVLGASYRVPLP-SNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHE

AT1G78890.1 unknown protein1.7e-0944.71Show/hide
Query:  PDWLSFVLGASYRVPLP-SNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHEE
        PDWL FV GAS+ VP P S SH   IA ++  LANP+S E S+S +++ GW  S YFI+G    S    V+T +T   A    +E
Subjt:  PDWLSFVLGASYRVPLP-SNSHLPLIANVLRNLANPLSPE*SLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATATATATGACAATATCCTTCCGTACCACAACCGTTCCTTTTAGGATAAAATAAAATTAGATTATAGCAATTCCCATTTCCAATCCTCAACCACAGTTCTTCTGGGCTCT
CTATCAGCTTCTCCATTTTTCCATTTATCTCCAAATTCCTTATGTCTCTCTCGCCTCTATCCAAACCCAAATCCCTAACCCTAACCCTAAATCTCCTCCCTCCTCACCTC
TTCCGCCGTCCTTTCTCCTCCCCTTCCGATCACGATCTCACCGACCTCCCTGAATCTCCTTCTTCTTCTGATCCCCTTCTTCGCAACCTTGAGGACGCTATTCAACGCAT
CCTCGTTCACCGATCTGCCCCGATTGGCTTTCCTTCGTTCTCGGTGCTTCCTATCGGGTTCCTCTGCCTTCTAATTCCCATTTACCTCTCATTGCCAACGTTCTTCGTAA
CTTAGCTAACCCTCTCTCTCCTGAATAATCCTTGTCTACCACTACCATCTGTGGCTGGCTCTCTTCTCATTACTTCATTCAAGGTACGCATCTTCCTTCTCTTGATCCGG
TGGTTGACACCACGTTGACTGAATGTGATGCTTCCCTTGACCACGAGGAAGGATGAGAATCCGATTTGGGTATCCTAGAGATAATGAAAGTAATACAAATGATGGCATTT
TCTTCTACTACTCTTTGCAGCTCGCCTTGCCTTGTAAACCTCATGTATAGAAGAAGACAACTGAATAACAAGCTAAGCAGAATGGCCGAGTAAGGGGTAGAAGCTTGTAC
AGATGTGAACTGGTCGGTGAGTGCTATTTATAAAATGGCCCTTCGTCGATCATTTAGAAGCTTCTGCTCTTAAACGTTGTTAAATGTTTTTCCTTTTTAGTAACTTATTT
CTTTCAACTTTTTGCATATGTATTTTGTTCTCTTGTTGATACCAAGATAACTATTTATCACACAATTAGTAGGTTT
mRNA sequenceShow/hide mRNA sequence
ATATATATGACAATATCCTTCCGTACCACAACCGTTCCTTTTAGGATAAAATAAAATTAGATTATAGCAATTCCCATTTCCAATCCTCAACCACAGTTCTTCTGGGCTCT
CTATCAGCTTCTCCATTTTTCCATTTATCTCCAAATTCCTTATGTCTCTCTCGCCTCTATCCAAACCCAAATCCCTAACCCTAACCCTAAATCTCCTCCCTCCTCACCTC
TTCCGCCGTCCTTTCTCCTCCCCTTCCGATCACGATCTCACCGACCTCCCTGAATCTCCTTCTTCTTCTGATCCCCTTCTTCGCAACCTTGAGGACGCTATTCAACGCAT
CCTCGTTCACCGATCTGCCCCGATTGGCTTTCCTTCGTTCTCGGTGCTTCCTATCGGGTTCCTCTGCCTTCTAATTCCCATTTACCTCTCATTGCCAACGTTCTTCGTAA
CTTAGCTAACCCTCTCTCTCCTGAATAATCCTTGTCTACCACTACCATCTGTGGCTGGCTCTCTTCTCATTACTTCATTCAAGGTACGCATCTTCCTTCTCTTGATCCGG
TGGTTGACACCACGTTGACTGAATGTGATGCTTCCCTTGACCACGAGGAAGGATGAGAATCCGATTTGGGTATCCTAGAGATAATGAAAGTAATACAAATGATGGCATTT
TCTTCTACTACTCTTTGCAGCTCGCCTTGCCTTGTAAACCTCATGTATAGAAGAAGACAACTGAATAACAAGCTAAGCAGAATGGCCGAGTAAGGGGTAGAAGCTTGTAC
AGATGTGAACTGGTCGGTGAGTGCTATTTATAAAATGGCCCTTCGTCGATCATTTAGAAGCTTCTGCTCTTAAACGTTGTTAAATGTTTTTCCTTTTTAGTAACTTATTT
CTTTCAACTTTTTGCATATGTATTTTGTTCTCTTGTTGATACCAAGATAACTATTTATCACACAATTAGTAGGTTT
Protein sequenceShow/hide protein sequence
IYMTISFRTTTVPFRIKN*IIAIPISNPQPQFFWALYQLLHFSIYLQIPYVSLASIQTQIPNPNPKSPPSSPLPPSFLLPFRSRSHRPPISFFF*SPSSQP*GRYSTHPR
SPICPDWLSFVLGASYRVPLPSNSHLPLIANVLRNLANPLSPESLSTTTICGWLSSHYFIQGTHLPSLDPVVDTTLTECDASLDHEEGESDLGILEIMKVIQMMAFSSTT
LCSSPCLVNLMYRRRQLNNKLSRMAEGVEACTDVNWSVSAIYKMALRRSFRSFCS*TLLNVFPF**LISFNFLHMYFVLLLIPRLFITQLVGX