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Chy4G076150 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G076150
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionPolyA_pol domain-containing protein
Genome locationchrH04:12242269..12243101
RNA-Seq ExpressionChy4G076150
SyntenyChy4G076150
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4283094.1 unnamed protein product [Prunus armeniaca]9.85e-0866.67Show/hide
Query:  NRLCIACLDAMWNFIQHINFIIFSILVVNYIFRDSIKRKVINAET
        +RLC+A LDA WN IQ I    F+I VVNYIFRDS+KRKV +AET
Subjt:  NRLCIACLDAMWNFIQHINFIIFSILVVNYIFRDSIKRKVINAET

XP_004140936.3 tRNA nucleotidyltransferase cca2 [Cucumis sativus]4.72e-0745.21Show/hide
Query:  NRLCIACLDAMWNFIQHINFIIFS----------------------------ILVVNYIFRDSIKRKVINAET
        NRLC+ACLDA WN IQHIN   FS                            I +VNYIFRDS+KRK  +AET
Subjt:  NRLCIACLDAMWNFIQHINFIIFS----------------------------ILVVNYIFRDSIKRKVINAET

XP_008456683.1 PREDICTED: putative CCA tRNA nucleotidyltransferase 2 [Cucumis melo]7.21e-0849.32Show/hide
Query:  NRLCIACLDAMWNFIQHINFIIFS----------------------------ILVVNYIFRDSIKRKVINAET
        NRLCIACLDA WN IQHIN   FS                            I VVNYIFRDS+KRKV +AET
Subjt:  NRLCIACLDAMWNFIQHINFIIFS----------------------------ILVVNYIFRDSIKRKVINAET

XP_015583667.1 putative CCA tRNA nucleotidyltransferase 2 isoform X2 [Ricinus communis]2.02e-0553.33Show/hide
Query:  NRLCIACLDAMWNFIQHINFIIFSILVVNYIFRDSIKRKVINAET
        ++LCIA LDA WN IQ I    F++ VVN+IF+DS+K+K  ++ET
Subjt:  NRLCIACLDAMWNFIQHINFIIFSILVVNYIFRDSIKRKVINAET

XP_034220731.1 tRNA nucleotidyltransferase cca2 isoform X2 [Prunus dulcis]9.85e-0866.67Show/hide
Query:  NRLCIACLDAMWNFIQHINFIIFSILVVNYIFRDSIKRKVINAET
        +RLC+A LDA WN IQ I    F+I VVNYIFRDS+KRKV +AET
Subjt:  NRLCIACLDAMWNFIQHINFIIFSILVVNYIFRDSIKRKVINAET

TrEMBL top hitse value%identityAlignment
A0A0A0KEA1 PolyA_pol domain-containing protein5.5e-0545.21Show/hide
Query:  NRLCIACLDAMWNFIQHINFIIFS----------------------------ILVVNYIFRDSIKRKVINAET
        NRLC+ACLDA WN IQHIN   FS                            I +VNYIFRDS+KRK  +AET
Subjt:  NRLCIACLDAMWNFIQHINFIIFS----------------------------ILVVNYIFRDSIKRKVINAET

A0A1S3C4H8 putative CCA tRNA nucleotidyltransferase 21.1e-0549.32Show/hide
Query:  NRLCIACLDAMWNFIQHINFIIFS----------------------------ILVVNYIFRDSIKRKVINAET
        NRLCIACLDA WN IQHIN   FS                            I VVNYIFRDS+KRKV +AET
Subjt:  NRLCIACLDAMWNFIQHINFIIFS----------------------------ILVVNYIFRDSIKRKVINAET

A0A5A7SQ51 Putative CCA tRNA nucleotidyltransferase 21.1e-0549.32Show/hide
Query:  NRLCIACLDAMWNFIQHINFIIFS----------------------------ILVVNYIFRDSIKRKVINAET
        NRLCIACLDA WN IQHIN   FS                            I VVNYIFRDS+KRKV +AET
Subjt:  NRLCIACLDAMWNFIQHINFIIFS----------------------------ILVVNYIFRDSIKRKVINAET

A0A6J5V5Z3 PolyA_pol domain-containing protein1.5e-0566.67Show/hide
Query:  NRLCIACLDAMWNFIQHINFIIFSILVVNYIFRDSIKRKVINAET
        +RLC+A LDA WN IQ I    F+I VVNYIFRDS+KRKV +AET
Subjt:  NRLCIACLDAMWNFIQHINFIIFSILVVNYIFRDSIKRKVINAET

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAAAAGTTTGGGATGACAGAGGATGATGCATATAGAAGGAATTTAACAATCAATAGGCTTTGCATTGCTTGTCTGGATGCCATGTGGAACTTCATTCAGCATATCAATTT
CATTATCTTTAGTATTCTTGTTGTCAACTATATTTTTCGGGATTCTATCAAGCGAAAAGTTATCAATGCTGAAACA
mRNA sequenceShow/hide mRNA sequence
CAAAAGTTTGGGATGACAGAGGATGATGCATATAGAAGGAATTTAACAATCAATAGGCTTTGCATTGCTTGTCTGGATGCCATGTGGAACTTCATTCAGCATATCAATTT
CATTATCTTTAGTATTCTTGTTGTCAACTATATTTTTCGGGATTCTATCAAGCGAAAAGTTATCAATGCTGAAACA
Protein sequenceShow/hide protein sequence
QKFGMTEDDAYRRNLTINRLCIACLDAMWNFIQHINFIIFSILVVNYIFRDSIKRKVINAET