CuGenDBv2

Gene ID	Chy4G076330
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	protein LOW PSII ACCUMULATION 1, chloroplastic
Genome location	chrH04:12876447..12879804
RNA-Seq Expression	Chy4G076330
Synteny	Chy4G076330
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021883 - Protein LOW PSII ACCUMULATION 1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004152010.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Cucumis sativus]

2.30e-235

97.34

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Query:  MAVSLFTPSISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV
        MAVSLFTPSISS NNIAPPPHFSPTPSHNASDFKFRRRS C VHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV
Subjt:  MAVSLFTPSISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV

Query:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIAR
        RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDIL+GLG+DFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPIS LRGIAR
Subjt:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIAR

Query:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDG
        LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVK+ITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDS VYLSLRMDG
Subjt:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDG

Query:  RVRGSGVGYPPWNALVTQLPPVKGLWSGLLDGMDGRVL
        RVRGSGVGYPPWNALV QLPPVKGLWSGLLDGMDGRVL
Subjt:  RVRGSGVGYPPWNALVTQLPPVKGLWSGLLDGMDGRVL

XP_008447350.1 PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic [Cucumis melo]

3.21e-226

94.08

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Query:  MAVSLFTPSISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV
        MAVSL T  +SS NNIAPPPHFSPTPSHNA DFKF RRSC HVHRKTVSFSSSPRLPVSLRF VYGRRNLAN+I SAADKPEISSTAKIRSEVLSPFRSV
Subjt:  MAVSLFTPSISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV

Query:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIAR
        RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIAR
Subjt:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIAR

Query:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDG
        LVICAGPESF+IEAFKSSEPFTE+LLERGVLVVPLATDVTTLNFEFD+REEVK+IT+KRK+LWRLTPVYMTEWSAWLDEQKKLAGV+SDS VYLSLRMDG
Subjt:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDG

Query:  RVRGSGVGYPPWNALVTQLPPVKGLWSGLLDGMDGRVL
        RVRGSGVGYPPWNALV QLPPVKGLWSGLLDGMDGRVL
Subjt:  RVRGSGVGYPPWNALVTQLPPVKGLWSGLLDGMDGRVL

XP_022131239.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Momordica charantia]

2.64e-197

84.55

Show/hide

Query:  SISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTF
        +ISS NN  PPPH   T SHNA +FKF R  CC VH KTV FSS P L  SLR L   RRNLANF CSAA+KPEISSTAKIRSEVLSPFRSVRMFFYLTF
Subjt:  SISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTF

Query:  IASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVICAGPE
        IASGTLGGLIATTQLL ALANSSRA++VPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ+KVIP+ +LRGIARLVICAGPE
Subjt:  IASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVICAGPE

Query:  SFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDGRVRGSGVG
        SFI+EAF+SSEPFTE+LLERGV+VVP ATDV++LNFEFD+RE++K++TTKRKRLWRLTPVYM EWSAWLDEQKKLAGV+++S VYLSLRMDGRVRGSGVG
Subjt:  SFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDGRVRGSGVG

Query:  YPPWNALVTQLPPVKGLWSGLLDGMDGRVL
        YPPWNALV QLPPVKGLWSGLLDGMDGRVL
Subjt:  YPPWNALVTQLPPVKGLWSGLLDGMDGRVL

XP_022963501.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita moschata]

1.13e-197

85.11

Show/hide

Query:  ISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFI
        I S NN   PPH S T SHNA + KF RR CCHVHR  VSF+  P +  SLR+L Y RRNLA+  CSA+DKPEISSTAKIRSEVLSPFRSVRMFFYLTFI
Subjt:  ISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFI

Query:  ASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVICAGPES
        ASGTLGGLIATTQLL ALANSSRA+EVPDIL GLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVI ISTLRGIARLVICAGPES
Subjt:  ASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVICAGPES

Query:  FIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDGRVRGSGVGY
        FI+EAFK+SEPFTERLLERGVLV+P ATD ++LNFEFD+REE+K+ITTKRKRLWRLTPVYM++WSAWLD+QKKLAGV+SDS VYLSLRMDGRVRGSGVGY
Subjt:  FIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDGRVRGSGVGY

Query:  PPWNALVTQLPPVKGLWSGLLDGMDGRVL
        PPWNALV QLPPVKGLWSGLLDGMDGRVL
Subjt:  PPWNALVTQLPPVKGLWSGLLDGMDGRVL

XP_038888898.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Benincasa hispida]

3.55e-215

90.83

Show/hide

Query:  MAVSLFTPSISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV
        MAVSL TP+ISS NNI  PPHFS T     SDFKFRRR CCHVHRKT+SF+SSP LP SL  L Y RRNLANF CSAADKPEISSTAKIRSEVLSPFRSV
Subjt:  MAVSLFTPSISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV

Query:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIAR
        RMFFYLTFIASGTLGGLIATTQLL ALANSSRA+EVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIAR
Subjt:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIAR

Query:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDG
        LVICAGPESFI+EAFKSSEPFTERLLERGVLVVPLATDV+TLNFEFD+REEVK++TTKRKRLWRLTPVYMTEWSAWLDEQKKLAGV+SDS VYLSLRMDG
Subjt:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDG

Query:  RVRGSGVGYPPWNALVTQLPPVKGLWSGLLDGMDGRVL
        RVRGSGVGYPPWNALV QLPPVKGLWSGLLDGMDGRVL
Subjt:  RVRGSGVGYPPWNALVTQLPPVKGLWSGLLDGMDGRVL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L902 Uncharacterized protein

4.7e-183

97.34

Show/hide

Query:  MAVSLFTPSISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV
        MAVSLFTPSISS NNIAPPPHFSPTPSHNASDFKFRRRS C VHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV
Subjt:  MAVSLFTPSISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV

Query:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIAR
        RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDIL+GLG+DFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPIS LRGIAR
Subjt:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIAR

Query:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDG
        LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVK+ITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDS VYLSLRMDG
Subjt:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDG

Query:  RVRGSGVGYPPWNALVTQLPPVKGLWSGLLDGMDGRVL
        RVRGSGVGYPPWNALV QLPPVKGLWSGLLDGMDGRVL
Subjt:  RVRGSGVGYPPWNALVTQLPPVKGLWSGLLDGMDGRVL

A0A1S3BHU5 protein LOW PSII ACCUMULATION 1, chloroplastic

4.3e-176

94.08

Show/hide

Query:  MAVSLFTPSISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV
        MAVSL T  +SS NNIAPPPHFSPTPSHNA DFKF RRSC HVHRKTVSFSSSPRLPVSLRF VYGRRNLAN+I SAADKPEISSTAKIRSEVLSPFRSV
Subjt:  MAVSLFTPSISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV

Query:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIAR
        RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIAR
Subjt:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIAR

Query:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDG
        LVICAGPESF+IEAFKSSEPFTE+LLERGVLVVPLATDVTTLNFEFD+REEVK+IT+KRK+LWRLTPVYMTEWSAWLDEQKKLAGV+SDS VYLSLRMDG
Subjt:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDG

Query:  RVRGSGVGYPPWNALVTQLPPVKGLWSGLLDGMDGRVL
        RVRGSGVGYPPWNALV QLPPVKGLWSGLLDGMDGRVL
Subjt:  RVRGSGVGYPPWNALVTQLPPVKGLWSGLLDGMDGRVL

A0A5D3BG35 Protein LOW PSII ACCUMULATION 1

4.3e-176

94.08

Show/hide

Query:  MAVSLFTPSISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV
        MAVSL T  +SS NNIAPPPHFSPTPSHNA DFKF RRSC HVHRKTVSFSSSPRLPVSLRF VYGRRNLAN+I SAADKPEISSTAKIRSEVLSPFRSV
Subjt:  MAVSLFTPSISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV

Query:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIAR
        RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIAR
Subjt:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIAR

Query:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDG
        LVICAGPESF+IEAFKSSEPFTE+LLERGVLVVPLATDVTTLNFEFD+REEVK+IT+KRK+LWRLTPVYMTEWSAWLDEQKKLAGV+SDS VYLSLRMDG
Subjt:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDG

Query:  RVRGSGVGYPPWNALVTQLPPVKGLWSGLLDGMDGRVL
        RVRGSGVGYPPWNALV QLPPVKGLWSGLLDGMDGRVL
Subjt:  RVRGSGVGYPPWNALVTQLPPVKGLWSGLLDGMDGRVL

A0A6J1BP58 protein LOW PSII ACCUMULATION 1, chloroplastic

4.6e-154

83.43

Show/hide

Query:  MAVSLFTPSISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV
        M VS+   +ISS NN  PPPH   T SHNA +FKF R  CC VH KTV FSS P L  SLR L   RRNLANF CSAA+KPEISSTAKIRSEVLSPFRSV
Subjt:  MAVSLFTPSISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSV

Query:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIAR
        RMFFYLTFIASGTLGGLIATTQLL ALANSSRA++VPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ+KVIP+ +LRGIAR
Subjt:  RMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIAR

Query:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDG
        LVICAGPESFI+EAF+SSEPFTE+LLERGV+VVP ATDV++LNFEFD+RE++K++TTKRKRLWRLTPVYM EWSAWLDEQKKLAGV+++S VYLSLRMDG
Subjt:  LVICAGPESFIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDG

Query:  RVRGSGVGYPPWNALVTQLPPVKGLWSGLLDGMDGRVL
        RVRGSGVGYPPWNALV QLPPVKGLWSGLLDGMDGRVL
Subjt:  RVRGSGVGYPPWNALVTQLPPVKGLWSGLLDGMDGRVL

A0A6J1HGA1 protein LOW PSII ACCUMULATION 1, chloroplastic

7.1e-155

85.11

Show/hide

Query:  ISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFI
        I S NN   PPH S T SHNA + KF RR CCHVHR  VSF+  P +  SLR+L Y RRNLA+  CSA+DKPEISSTAKIRSEVLSPFRSVRMFFYLTFI
Subjt:  ISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFI

Query:  ASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVICAGPES
        ASGTLGGLIATTQLL ALANSSRA+EVPDIL GLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVI ISTLRGIARLVICAGPES
Subjt:  ASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVICAGPES

Query:  FIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDGRVRGSGVGY
        FI+EAFK+SEPFTERLLERGVLV+P ATD ++LNFEFD+REE+K+ITTKRKRLWRLTPVYM++WSAWLD+QKKLAGV+SDS VYLSLRMDGRVRGSGVGY
Subjt:  FIIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDGRVRGSGVGY

Query:  PPWNALVTQLPPVKGLWSGLLDGMDGRVL
        PPWNALV QLPPVKGLWSGLLDGMDGRVL
Subjt:  PPWNALVTQLPPVKGLWSGLLDGMDGRVL

SwissProt top hits

e value

%identity

Alignment

Q9SRY4 Protein LOW PSII ACCUMULATION 1, chloroplastic

8.1e-31

30.94

Show/hide

Query:  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQN
        K+ SEV +PFR VR FFY  F A+  +       +L+ A+     A  + +      I+ G + +   L+  EN  +  Q+ +++R+E+LS L LR+  N
Subjt:  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQN

Query:  KVIPISTLRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPL---------------------ATDVTTLNFEFDDREE--VKEITTKRKRLWR
        +V+ +  LR   R VI AG +  +  A + ++ F   LL RGVL+VP+                     AT + ++  +FD R +  V +   K +  ++
Subjt:  KVIPISTLRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPL---------------------ATDVTTLNFEFDDREE--VKEITTKRKRLWR

Query:  LTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDGRVRGSGVGYPPWNALVTQLPPVKGLWSGL
           V   EW  W+ +Q+   GV     VY+ LR+DGRVR SG G P W  +  +LPP+  + S L
Subjt:  LTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDGRVRGSGVGYPPWNALVTQLPPVKGLWSGL

Arabidopsis top hits

e value

%identity

Alignment

AT1G02910.1 tetratricopeptide repeat (TPR)-containing protein

5.8e-32

30.94

Show/hide

Query:  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQN
        K+ SEV +PFR VR FFY  F A+  +       +L+ A+     A  + +      I+ G + +   L+  EN  +  Q+ +++R+E+LS L LR+  N
Subjt:  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQN

Query:  KVIPISTLRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPL---------------------ATDVTTLNFEFDDREE--VKEITTKRKRLWR
        +V+ +  LR   R VI AG +  +  A + ++ F   LL RGVL+VP+                     AT + ++  +FD R +  V +   K +  ++
Subjt:  KVIPISTLRGIARLVICAGPESFIIEAFKSSEPFTERLLERGVLVVPL---------------------ATDVTTLNFEFDDREE--VKEITTKRKRLWR

Query:  LTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDGRVRGSGVGYPPWNALVTQLPPVKGLWSGL
           V   EW  W+ +Q+   GV     VY+ LR+DGRVR SG G P W  +  +LPP+  + S L
Subjt:  LTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDGRVRGSGVGYPPWNALVTQLPPVKGLWSGL

AT4G28740.1 FUNCTIONS IN: molecular_function unknown

1.2e-101

60.25

Show/hide

Query:  HFSPTPSHNASDFKFRRRSCCHVHRKTVSFS-SSPRLPVSLRFLVYGRRNLA-NFICSAADKP-EISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGL
        H S    + A +    RR   H HR+ + FS  + RL ++ +     ++ L+ N +C AAD+P EIS+ A+IRSEVLSPFRSVRMFFYL FIASG+LGGL
Subjt:  HFSPTPSHNASDFKFRRRSCCHVHRKTVSFS-SSPRLPVSLRFLVYGRRNLA-NFICSAADKP-EISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGL

Query:  IATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ-NKVIPISTLRGIARLVICAGPESFIIEAFK
        IAT++L+GALAN +R+ EV +I+KGLG+D GA +LFAFLYF EN  KNAQ+ARLSREE+L  LK+RV++ NKVI +  LRG+ARLVICAGP  FI EAFK
Subjt:  IATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ-NKVIPISTLRGIARLVICAGPESFIIEAFK

Query:  SSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEV-KEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDGRVRGSGVGYPPWNAL
         S+ +T+ L+ERGV+VV  ATD  +   EFD+ +   +E++ +RK+LWR+TPV++ EW  WL+EQKKLA V+SDS VYLSLR+DGRVR SGVGYPPW A 
Subjt:  SSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEV-KEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDGRVRGSGVGYPPWNAL

Query:  VTQLPPVKGLWSGLLDGMDGRV
        V QLPPVKG+W+GLLDGMDGRV
Subjt:  VTQLPPVKGLWSGLLDGMDGRV

Sequences

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CDS sequence

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ATGGCGGTTTCCCTTTTCACTCCCAGCATTTCTTCCATCAACAACATTGCTCCACCTCCTCATTTCTCTCCGACGCCCTCCCATAACGCTTCGGATTTCAAATTC
CGCCGCCGCAGCTGCTGCCATGTTCATCGAAAGACGGTATCATTTAGTTCTAGCCCTAGGCTACCAGTTTCGCTTCGTTTTCTTGTTTACGGCAGACGGAATTTA
GCTAACTTCATTTGCTCGGCTGCTGATAAACCGGAAATCAGTTCCACAGCCAAGATAAGAAGTGAAGTTCTGTCTCCATTTCGGTCTGTTCGGATGTTCTTTTAT
CTCACTTTCATTGCTAGTGGTACATTGGGAGGACTGATAGCAACCACTCAATTGCTTGGTGCATTGGCAAACTCATCAAGAGCTGACGAAGTCCCTGATATTCTA
AAAGGACTTGGAATAGATTTCGGAGCCGTAGCTCTTTTTGCTTTTCTTTATTTCAGAGAAAACAATGCAAAAAATGCTCAATTGGCTAGACTGTCAAGAGAAGAA
AGCCTTTCCAACTTAAAGCTTCGAGTGGACCAAAACAAAGTTATTCCCATCAGCACTTTGCGTGGGATTGCTCGTCTGGTAATTTGTGCTGGCCCTGAATCCTTT
ATCATTGAAGCTTTTAAATCAAGTGAACCTTTCACTGAACGACTTCTAGAACGGGGTGTTTTAGTCGTACCTCTTGCCACAGATGTCACTACACTGAATTTTGAG
TTTGATGACCGTGAAGAGGTGAAGGAGATAACCACAAAAAGGAAAAGACTCTGGCGCTTGACTCCAGTTTACATGACTGAGTGGTCAGCGTGGTTAGATGAACAA
AAGAAGTTGGCTGGAGTCACCTCTGATTCTTCTGTGTATCTATCTCTGCGAATGGATGGCCGTGTTCGTGGTAGTGGTGTTGGCTATCCTCCATGGAATGCTCTT
GTAACACAATTACCACCTGTAAAAGGACTATGGTCAGGTCTTCTAGATGGGATGGATGGGAGAGTTCTTTGA

mRNA sequence

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Protein sequence

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MAVSLFTPSISSINNIAPPPHFSPTPSHNASDFKFRRRSCCHVHRKTVSFSSSPRLPVSLRFLVYGRRNLANFICSAADKPEISSTAKIRSEVLSPFRSVRMFFY
LTFIASGTLGGLIATTQLLGALANSSRADEVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVICAGPESF
IIEAFKSSEPFTERLLERGVLVVPLATDVTTLNFEFDDREEVKEITTKRKRLWRLTPVYMTEWSAWLDEQKKLAGVTSDSSVYLSLRMDGRVRGSGVGYPPWNAL
VTQLPPVKGLWSGLLDGMDGRVL

Chy4G076330 (gene) of Cucumber (hystrix) v1 genome