; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy4G076800 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G076800
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionMediator of RNA polymerase II transcription subunit 6
Genome locationchrH04:13928843..13932195
RNA-Seq ExpressionChy4G076800
SyntenyChy4G076800
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0070847 - core mediator complex (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR007018 - Mediator complex, subunit Med6
IPR016820 - Mediator complex, subunit Med6, metazoa/plant
IPR038566 - Mediator complex, subunit Med6 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149176.2 mediator of RNA polymerase II transcription subunit 6 [Cucumis sativus]1.08e-17898.43Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVME
        MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG+EYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVD ENESEEVKPAKETINFKEVKRVDHILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPP+PEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

XP_008447572.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6 isoform X1 [Cucumis melo]3.92e-17697.25Show/hide
Query:  MATPPPPT-APPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVM
        MATPPPPT APPGTGNFEGGP+PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG+EYMLNEVM
Subjt:  MATPPPPT-APPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVD ENESEEVKPAKETINFKEVKRVDHILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPP+PEGYAPA TA+TEKGPENQQGESQQPSADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

XP_022148297.1 mediator of RNA polymerase II transcription subunit 6 [Momordica charantia]6.72e-17094.49Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVME
        MATPPPP APPG  NFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVD ENESEEVKP KETINFKEVKRVDHILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPP+PEGY PA TAE EKGPENQ  E QQPSADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

XP_023524903.1 mediator of RNA polymerase II transcription subunit 6 [Cucurbita pepo subsp. pepo]3.60e-16492.13Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVME
        MATPPPP    G GNFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG+EYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVD ENESEEVKPAK TI+FKEVKRVD ILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPP+PEGY PA  +E EKGPE+QQGE QQP+ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

XP_038896808.1 mediator of RNA polymerase II transcription subunit 6 [Benincasa hispida]1.80e-17496.46Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVME
        MATPPPPTAPPG GNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG+EYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVD ENE EEVKPAKETINFKEVKRVDHILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPP+PEGYAPA TAETEKGPEN  GESQQP ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

TrEMBL top hitse value%identityAlignment
A0A0A0L8C2 Mediator of RNA polymerase II transcription subunit 62.2e-14098.43Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVME
        MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG+EYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSRALYYISKAFTTASSKLEKIGYVD ENESEEVKPAKETINFKEVKRVDHILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPP+PEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

A0A1S3BHR9 Mediator of RNA polymerase II transcription subunit 62.1e-13897.25Show/hide
Query:  MATPPPP-TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVM
        MATPPPP TAPPGTGNFEGGP+PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG+EYMLNEVM
Subjt:  MATPPPP-TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVD ENESEEVKPAKETINFKEVKRVDHILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPP+PEGYAPA TA+TEKGPENQQGESQQPSADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

A0A5D3CDR8 Mediator of RNA polymerase II transcription subunit 62.1e-13897.25Show/hide
Query:  MATPPPP-TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVM
        MATPPPP TAPPGTGNFEGGP+PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG+EYMLNEVM
Subjt:  MATPPPP-TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVM

Query:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASL
        EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVD ENESEEVKPAKETINFKEVKRVDHILASL
Subjt:  EPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASL

Query:  QRKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        QRKLPPAPPPPP+PEGYAPA TA+TEKGPENQQGESQQPSADPIIDQGPAKRMKF
Subjt:  QRKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

A0A6J1D4P7 Mediator of RNA polymerase II transcription subunit 61.2e-13394.49Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVME
        MATPPPP APPG  NFEGGP PAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG EYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVD ENESEEVKP KETINFKEVKRVDHILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPP+PEGY PA TAE EKGPENQ  E QQPSADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

A0A6J1G911 Mediator of RNA polymerase II transcription subunit 66.6e-12992.13Show/hide
Query:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVME
        MATPP    PPG GNFEGGP  AAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTG+EYMLNEVME
Subjt:  MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVME

Query:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASLQ
        PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVD ENESEEVKPAKETI+FKEVKRVD ILASLQ
Subjt:  PHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASLQ

Query:  RKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
        RKLPPAPPPPP+PEGY PA  +E EKGPE+QQGE QQP+ADPIIDQGPAKRMKF
Subjt:  RKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

SwissProt top hitse value%identityAlignment
F4IXJ7 Mediator of RNA polymerase II transcription subunit 62.5e-8560.69Show/hide
Query:  TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVMEPHLFVFR
        TA    GN     +P   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG+EYML +  EP+LFVFR
Subjt:  TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVMEPHLFVFR

Query:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GYVDF
        KQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSR +Y ISKAFT A+SKLE I                                     G+  F
Subjt:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GYVDF

Query:  ------ENESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
              +NE  E KPA ET++ KE+KRVD IL SL RKL P PPPPP+PEGY        ++    Q GESQ P  DPIIDQGPAKRMKF
Subjt:  ------ENESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

Q3SZY9 Mediator of RNA polymerase II transcription subunit 64.0e-2234.44Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG
        ++ GI + D  W+    L+   V DYF+   +PFYD TCNNE ++M+    L L  L++M GVEY+L    EP LF+ RKQ+R  P +V P+  YYI+ G
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG

Query:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY----VDFENESE---EVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPYPEGYAP
         IYQAP L +V  +RV  A++ I  AF  A S        GY     D E + +   +VK  +E  +  + +RVD +L  L++K PP        E   P
Subjt:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY----VDFENESE---EVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPYPEGYAP

Query:  AATAETEKGPENQQGESQQPSADPIIDQ------GPAKRMK
            + E  P  +  +S++      + Q       P KRM+
Subjt:  AATAETEKGPENQQGESQQPSADPIIDQ------GPAKRMK

Q54PN3 Putative mediator of RNA polymerase II transcription subunit 61.1e-2738.12Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSI
        D+T + +RD LWL  YPL+   +  YF+ S FYD  CNNEQL+M+    LDLS L  M G+EY L + +EP  F+  KQ R  P  V     YY+++G+I
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSI

Query:  YQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDFENESEEVK-PAKETINFKEVKRVDHILASLQRKLPPAPPPPPYPEGYAPAATAE
        YQAP+L  VF +RVS+++ ++S+AF + SS +      GY   +D  N+ E+ K  A      ++ KR+D ++ SL  K P    P   P+      T +
Subjt:  YQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDFENESEEVK-PAKETINFKEVKRVDHILASLQRKLPPAPPPPPYPEGYAPAATAE

Query:  TE
         +
Subjt:  TE

Q7Q107 Mediator of RNA polymerase II transcription subunit 64.7e-2335.74Show/hide
Query:  ICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQ
        I + D  W+    L+   V DYF+   +PFYD TCNNE +RM+      L  L+ MTGVEY+   V +P L+V RKQ R  P + TPM  YYI+ G++YQ
Subjt:  ICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDGSIYQ

Query:  APQLCNVFAARVSRALYYISKAFTTASSKLE---KIGYV-DFENE-----------SEEVKPAKETINFKEVKRVDHILASLQRKLP-PAPPPPPYPEGY
        AP L +VF +R+   ++++  AF  ASS        GY  DF +             +E    +E  +  + +RVD +L  L RK P P P     P G 
Subjt:  APQLCNVFAARVSRALYYISKAFTTASSKLE---KIGYV-DFENE-----------SEEVKPAKETINFKEVKRVDHILASLQRKLP-PAPPPPPYPEGY

Query:  APAATAETEKGPENQQGESQQPSAD-PIIDQGPAK
         P+ TA          G+S    AD  +I Q P +
Subjt:  APAATAETEKGPENQQGESQQPSAD-PIIDQGPAK

Q921D4 Mediator of RNA polymerase II transcription subunit 63.6e-2335.27Show/hide
Query:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG
        ++ GI + D  W+    L+   V DYF+   +PFYD TCNNE ++M+    L L  L++M G+EY+L    EP LF+ RKQ+R  P +V P+  YYI+ G
Subjt:  DMTGICFRDQLWLNTYPLDRNLVFDYFA--LSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVMEPHLFVFRKQKRDGPEKVTPMLTYYILDG

Query:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDFENESEEVKP----AKETINFKEVKRVDHILASLQRKLPPAPPPPPYPEGYAP
         IYQAP L +V  +RV  A++ I  AF  A S        GY        E E+VKP     +E  +  + +RVD +L  L++K PP        E   P
Subjt:  SIYQAPQLCNVFAARVSRALYYISKAFTTASSKLE---KIGY---VDFENESEEVKP----AKETINFKEVKRVDHILASLQRKLPPAPPPPPYPEGYAP

Query:  AATAETEKGPENQQGESQQPSADPIIDQ------GPAKRMK
           A+ E  P  +  +S++  +   I Q       P KRM+
Subjt:  AATAETEKGPENQQGESQQPSADPIIDQ------GPAKRMK

Arabidopsis top hitse value%identityAlignment
AT3G21350.1 RNA polymerase transcriptional regulation mediator-related9.9e-9371.08Show/hide
Query:  TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVMEPHLFVFR
        TA    GN     +P   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG+EYML +  EP+LFVFR
Subjt:  TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVMEPHLFVFR

Query:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESE--EVKPAKETINFKEVKRVDHILASLQRKLPP
        KQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSR +Y ISKAFT A+SKLE I  VD EN++E  E KPA ET++ KE+KRVD IL SL RKL P
Subjt:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESE--EVKPAKETINFKEVKRVDHILASLQRKLPP

Query:  APPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
         PPPPP+PEGY        ++    Q GESQ P  DPIIDQGPAKRMKF
Subjt:  APPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF

AT3G21350.2 RNA polymerase transcriptional regulation mediator-related1.8e-8660.69Show/hide
Query:  TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVMEPHLFVFR
        TA    GN     +P   QPPGTDMTGI FRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR RSIHPLDLS LSKMTG+EYML +  EP+LFVFR
Subjt:  TAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVMEPHLFVFR

Query:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GYVDF
        KQKRDGPEKVTPMLTYYILDGSIYQAPQLC+VFAARVSR +Y ISKAFT A+SKLE I                                     G+  F
Subjt:  KQKRDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKI-------------------------------------GYVDF

Query:  ------ENESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF
              +NE  E KPA ET++ KE+KRVD IL SL RKL P PPPPP+PEGY        ++    Q GESQ P  DPIIDQGPAKRMKF
Subjt:  ------ENESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPYPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTCCACCACCACCGACGGCCCCGCCAGGGACCGGGAATTTCGAGGGGGGGCCGCTGCCAGCAGCGCCTCAGCCTCCGGGCACGGACATGACTGGAATTTGCTT
TAGAGACCAGCTTTGGCTCAATACTTACCCTCTTGATCGAAACTTGGTTTTCGATTACTTCGCCTTGTCGCCTTTCTACGACTGGACTTGTAACAACGAACAACTCAGAA
TGCGCTCCATTCACCCCCTCGATCTTTCTCAACTCTCAAAAATGACAGGCGTAGAGTACATGCTGAATGAAGTTATGGAGCCTCACCTTTTCGTTTTCAGAAAGCAAAAA
AGAGATGGTCCTGAGAAAGTCACACCGATGCTGACTTATTATATCTTGGATGGTTCAATCTACCAGGCGCCTCAACTTTGCAATGTTTTTGCTGCCCGCGTTAGTCGGGC
ACTGTATTACATATCAAAGGCCTTTACCACTGCTTCCTCAAAGTTGGAGAAGATAGGATATGTTGATTTTGAAAATGAGAGTGAAGAAGTAAAACCTGCAAAAGAAACCA
TTAACTTTAAGGAAGTAAAGCGAGTTGATCATATTCTTGCATCTTTACAGCGCAAGCTGCCACCTGCCCCACCACCCCCACCATATCCTGAAGGTTATGCTCCTGCTGCC
ACAGCAGAGACAGAAAAAGGCCCTGAAAATCAGCAAGGAGAGTCACAACAGCCTTCTGCAGATCCCATTATTGATCAGGGTCCAGCTAAAAGGATGAAATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTCCACCACCACCGACGGCCCCGCCAGGGACCGGGAATTTCGAGGGGGGGCCGCTGCCAGCAGCGCCTCAGCCTCCGGGCACGGACATGACTGGAATTTGCTT
TAGAGACCAGCTTTGGCTCAATACTTACCCTCTTGATCGAAACTTGGTTTTCGATTACTTCGCCTTGTCGCCTTTCTACGACTGGACTTGTAACAACGAACAACTCAGAA
TGCGCTCCATTCACCCCCTCGATCTTTCTCAACTCTCAAAAATGACAGGCGTAGAGTACATGCTGAATGAAGTTATGGAGCCTCACCTTTTCGTTTTCAGAAAGCAAAAA
AGAGATGGTCCTGAGAAAGTCACACCGATGCTGACTTATTATATCTTGGATGGTTCAATCTACCAGGCGCCTCAACTTTGCAATGTTTTTGCTGCCCGCGTTAGTCGGGC
ACTGTATTACATATCAAAGGCCTTTACCACTGCTTCCTCAAAGTTGGAGAAGATAGGATATGTTGATTTTGAAAATGAGAGTGAAGAAGTAAAACCTGCAAAAGAAACCA
TTAACTTTAAGGAAGTAAAGCGAGTTGATCATATTCTTGCATCTTTACAGCGCAAGCTGCCACCTGCCCCACCACCCCCACCATATCCTGAAGGTTATGCTCCTGCTGCC
ACAGCAGAGACAGAAAAAGGCCCTGAAAATCAGCAAGGAGAGTCACAACAGCCTTCTGCAGATCCCATTATTGATCAGGGTCCAGCTAAAAGGATGAAATTTTGA
Protein sequenceShow/hide protein sequence
MATPPPPTAPPGTGNFEGGPLPAAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGVEYMLNEVMEPHLFVFRKQK
RDGPEKVTPMLTYYILDGSIYQAPQLCNVFAARVSRALYYISKAFTTASSKLEKIGYVDFENESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPPPPPYPEGYAPAA
TAETEKGPENQQGESQQPSADPIIDQGPAKRMKF