; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy4G077360 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G077360
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionphotosynthetic NDH subunit of lumenal location 3, chloroplastic
Genome locationchrH04:15085506..15086379
RNA-Seq ExpressionChy4G077360
SyntenyChy4G077360
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009344 - nitrite reductase complex [NAD(P)H] (cellular component)
GO:0009534 - chloroplast thylakoid (cellular component)
GO:0009654 - photosystem II oxygen evolving complex (cellular component)
GO:0019898 - extrinsic component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domainsIPR008797 - Oxygen-evolving enhancer protein 3
IPR023222 - PsbQ-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015220.1 Photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]5.78e-12585.78Show/hide
Query:  MARLANLNG---KFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTR
        MARLANLNG   KFSA P L KLQ   KR KITG L+KQ +VSSH+ISLTRRLALTSL SVALFGNA  EIASANEYWLDGPLP+PSV NNI NE+TGTR
Subjt:  MARLANLNG---KFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTR

Query:  SFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETA
        SFLK GIYIANIGT+GRKYRLK+YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAA D EKQPL DLANRLFDNFEKLEDAAKQKNLSET 
Subjt:  SFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETA

Query:  SYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

XP_004151964.1 photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucumis sativus]1.18e-14698.6Show/hide
Query:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFL
        MARLANLNGKFSA PNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFL
Subjt:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFL

Query:  KIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYY
        K GIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSET SYY
Subjt:  KIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYY

Query:  QQTTPILQEVMDRMA
        QQTTPILQEVMDRMA
Subjt:  QQTTPILQEVMDRMA

XP_008454569.1 PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucumis melo]7.97e-14597.21Show/hide
Query:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFL
        MARLANLNGKFSA PNLPKLQNIHK+LKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNI NEQTGTRSFL
Subjt:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFL

Query:  KIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYY
        K GIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLE+AAKQKNLSET SYY
Subjt:  KIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYY

Query:  QQTTPILQEVMDRMA
        QQTTPILQEVMDRMA
Subjt:  QQTTPILQEVMDRMA

XP_022139520.1 photosynthetic NDH subunit of lumenal location 3, chloroplastic [Momordica charantia]5.18e-12888.07Show/hide
Query:  MARLANLNG---KFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTR
        MARLANLNG   KFSA P LPKLQN  KRLKI GFL KQT+VSSH  S TRRLALTS+VSVALFGNAS EIASANEYWLDGPLPVPSV NNI NE+TGTR
Subjt:  MARLANLNG---KFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTR

Query:  SFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETA
        SFLK GIYIANIGT+GRKYRLK+YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAAAD EKQPL +LANRLFDNFEKLEDAAKQKNLSET 
Subjt:  SFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETA

Query:  SYYQQTTPILQEVMDRMA
        SYYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

XP_038899633.1 photosynthetic NDH subunit of lumenal location 3, chloroplastic [Benincasa hispida]1.25e-13290.23Show/hide
Query:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFL
        MARLANLN KF+A PNLPKLQN  KRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNAS EIASANEYWLDGPLPVPSV NNI NE+TGTRSFL
Subjt:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFL

Query:  KIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYY
        K GIYIANIGT+GRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISA  +  KQPL+DLANRLFDNFEKLEDAAKQKNLSET +YY
Subjt:  KIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYY

Query:  QQTTPILQEVMDRMA
        QQTTP+LQEVMDRMA
Subjt:  QQTTPILQEVMDRMA

TrEMBL top hitse value%identityAlignment
A0A0A0L7N1 Uncharacterized protein7.3e-11398.6Show/hide
Query:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFL
        MARLANLNGKFSA PNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFL
Subjt:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFL

Query:  KIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYY
        K GIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSET SYY
Subjt:  KIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYY

Query:  QQTTPILQEVMDRMA
        QQTTPILQEVMDRMA
Subjt:  QQTTPILQEVMDRMA

A0A1S3BZP3 photosynthetic NDH subunit of lumenal location 3, chloroplastic1.8e-11197.21Show/hide
Query:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFL
        MARLANLNGKFSA PNLPKLQNIHK+LKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNI NEQTGTRSFL
Subjt:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFL

Query:  KIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYY
        K GIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLE+AAKQKNLSET SYY
Subjt:  KIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYY

Query:  QQTTPILQEVMDRMA
        QQTTPILQEVMDRMA
Subjt:  QQTTPILQEVMDRMA

A0A5A7TX10 Photosynthetic NDH subunit of lumenal location 31.8e-11197.21Show/hide
Query:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFL
        MARLANLNGKFSA PNLPKLQNIHK+LKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNI NEQTGTRSFL
Subjt:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFL

Query:  KIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYY
        K GIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLE+AAKQKNLSET SYY
Subjt:  KIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYY

Query:  QQTTPILQEVMDRMA
        QQTTPILQEVMDRMA
Subjt:  QQTTPILQEVMDRMA

A0A6J1CCI9 photosynthetic NDH subunit of lumenal location 3, chloroplastic1.0e-9888.07Show/hide
Query:  MARLANLNG---KFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTR
        MARLANLNG   KFSA P LPKLQN  KRLKI GFL KQT+VSSH  S TRRLALTS+VSVALFGNAS EIASANEYWLDGPLPVPSV NNI NE+TGTR
Subjt:  MARLANLNG---KFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTR

Query:  SFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETA
        SFLK GIYIANIGT+GRKYRLK+YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAAAD EKQPL +LANRLFDNFEKLEDAAKQKNLSET 
Subjt:  SFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETA

Query:  SYYQQTTPILQEVMDRMA
        SYYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

A0A6J1FHS2 photosynthetic NDH subunit of lumenal location 3, chloroplastic3.7e-9685.32Show/hide
Query:  MARLANLNG---KFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTR
        MARLANLNG   KFSA P L KLQ   KR KI G L+KQ +VSSH++SLTRRLALTSL SVALFGNAS EIASANEYWLDGPLP+PSV NNI NE+TGTR
Subjt:  MARLANLNG---KFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTR

Query:  SFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETA
        SFLK GIYIANIGT+GRKYRLK+YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAA D EKQPL DLANRLFDNFEKLEDAAKQKNLSET 
Subjt:  SFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETA

Query:  SYYQQTTPILQEVMDRMA
        +YYQQTTPILQEVMDRMA
Subjt:  SYYQQTTPILQEVMDRMA

SwissProt top hitse value%identityAlignment
P83646 Oxygen-evolving enhancer protein 3, chloroplastic1.0e-1030.64Show/hide
Query:  TRRLALTSLVSVALFGNASPE--IASANEYWLDGPLPVPS--VDNNIVNEQT-GTRSFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVR
        T R A+  LV+  + G A  +  +A A +    GP P PS  +   + ++Q   T   L+   Y+  +       R K+ A D++ +  LI K    +VR
Subjt:  TRRLALTSLVSVALFGNASPE--IASANEYWLDGPLPVPS--VDNNIVNEQT-GTRSFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVR

Query:  KYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYYQQTTPILQEVMDRM
          LRL+++++ YD   VI++   DEK+ L DL  +LF   + L+ AAK K+  E   YY  T   L +V+ ++
Subjt:  KYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYYQQTTPILQEVMDRM

Q0D5P8 Oxygen-evolving enhancer protein 3, chloroplastic1.0e-1030.64Show/hide
Query:  TRRLALTSLVSVALFGNASPE--IASANEYWLDGPLPVPS--VDNNIVNEQT-GTRSFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVR
        T R A+  LV+  + G A  +  +A A +    GP P PS  +   + ++Q   T   L+   Y+  +       R K+ A D++ +  LI K    +VR
Subjt:  TRRLALTSLVSVALFGNASPE--IASANEYWLDGPLPVPS--VDNNIVNEQT-GTRSFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVR

Query:  KYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYYQQTTPILQEVMDRM
          LRL+++++ YD   VI++   DEK+ L DL  +LF   + L+ AAK K+  E   YY  T   L +V+ ++
Subjt:  KYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYYQQTTPILQEVMDRM

Q41932 Oxygen-evolving enhancer protein 3-2, chloroplastic3.5e-1129.41Show/hide
Query:  LKKQTDVSSHQISLTRRLALTSLVSVALFGNA--SPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSF---LKIGIYIANIGTKGRKYRLKKYAFDLLA
        ++ Q +VS  + S   R ++  LV+  L G +      A A    + GP P+PS      +     R F   LK   YI  +       R K  A +++ 
Subjt:  LKKQTDVSSHQISLTRRLALTSLVSVALFGNA--SPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSF---LKIGIYIANIGTKGRKYRLKKYAFDLLA

Query:  MADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYYQQTTPILQEVMDRM
        +   I K    YV+  LRL+++++ YD + VISA   +EKQ L DL  +LF   + L+ AA+ K+  +   YY +T   L  V+ ++
Subjt:  MADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYYQQTTPILQEVMDRM

Q9SGH4 Photosynthetic NDH subunit of lumenal location 3, chloroplastic1.1e-6558.64Show/hide
Query:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFLKKQTD--VSSHQISLTRRLALTSLVSVAL---FGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTG
        MA   +LN   +  P+LPKL    K  K +GF  ++T+       + +TRR+ L   VS+ L    G  +  +A  N +W+DGPLP+P + NNIVNE+TG
Subjt:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFLKKQTD--VSSHQISLTRRLALTSLVSVAL---FGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTG

Query:  TRSFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSE
        TR+F+K G+Y+A+IGTKGR YR+KK AFDLLAM DLIG DTLNYV+KYLRLKSTF++YDFD +ISAAA ++KQPL DLANRLFDNFEKLEDAAK KNL+E
Subjt:  TRSFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSE

Query:  TASYYQQTTPILQEVMDRMA
        T S Y+ T  +LQEVM RMA
Subjt:  TASYYQQTTPILQEVMDRMA

Q9XFT3 Oxygen-evolving enhancer protein 3-1, chloroplastic4.4e-1428.44Show/hide
Query:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFL----KKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLD-GPLPVPS------VDNNI
        MA +  L+G   A        N   RL  +G +    + +  V + Q   T R ++  LV+  L G +  +   A+   +  GP P PS       DN+ 
Subjt:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFL----KKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLD-GPLPVPS------VDNNI

Query:  VNEQTGTRSFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAK
         ++       LK   Y+  +       R K+ A D++ +  LI +    YV+  LR K++++ YD + +IS+   DEK+ L DL  +LFD  + L+ AAK
Subjt:  VNEQTGTRSFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAK

Query:  QKNLSETASYYQQTTPILQEVMDRM
        +K+ S+   YY +T   L EV+ ++
Subjt:  QKNLSETASYYQQTTPILQEVMDRM

Arabidopsis top hitse value%identityAlignment
AT1G14150.1 PsbQ-like 21.0e-1025.44Show/hide
Query:  TRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRL
        TRR  LTSL++  + G A+   A A E W                   GTRSF+K   ++  +  +    R+K+ A  L  M +++   +  YV  Y+RL
Subjt:  TRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRL

Query:  KSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYYQQTTPILQEVMDRMA
        K  ++  D    ++   +  +   V  AN L +N  +L+   +   + E+  YY++T   +  V++ +A
Subjt:  KSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYYQQTTPILQEVMDRMA

AT3G01440.1 PsbQ-like 17.9e-6758.64Show/hide
Query:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFLKKQTD--VSSHQISLTRRLALTSLVSVAL---FGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTG
        MA   +LN   +  P+LPKL    K  K +GF  ++T+       + +TRR+ L   VS+ L    G  +  +A  N +W+DGPLP+P + NNIVNE+TG
Subjt:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFLKKQTD--VSSHQISLTRRLALTSLVSVAL---FGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTG

Query:  TRSFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSE
        TR+F+K G+Y+A+IGTKGR YR+KK AFDLLAM DLIG DTLNYV+KYLRLKSTF++YDFD +ISAAA ++KQPL DLANRLFDNFEKLEDAAK KNL+E
Subjt:  TRSFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSE

Query:  TASYYQQTTPILQEVMDRMA
        T S Y+ T  +LQEVM RMA
Subjt:  TASYYQQTTPILQEVMDRMA

AT4G05180.1 photosystem II subunit Q-22.5e-1229.41Show/hide
Query:  LKKQTDVSSHQISLTRRLALTSLVSVALFGNA--SPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSF---LKIGIYIANIGTKGRKYRLKKYAFDLLA
        ++ Q +VS  + S   R ++  LV+  L G +      A A    + GP P+PS      +     R F   LK   YI  +       R K  A +++ 
Subjt:  LKKQTDVSSHQISLTRRLALTSLVSVALFGNA--SPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSF---LKIGIYIANIGTKGRKYRLKKYAFDLLA

Query:  MADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYYQQTTPILQEVMDRM
        +   I K    YV+  LRL+++++ YD + VISA   +EKQ L DL  +LF   + L+ AA+ K+  +   YY +T   L  V+ ++
Subjt:  MADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYYQQTTPILQEVMDRM

AT4G21280.1 photosystem II subunit QA6.3e-1628.83Show/hide
Query:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFL----KKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLD-GPLPVPSVDNNIVNEQTG
        MA +  L+G   A        N   RL  +G +    + +  V + Q   T R ++  LV+  L G +  +   A+   +  GP P PS      +    
Subjt:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFL----KKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLD-GPLPVPSVDNNIVNEQTG

Query:  TRSF---LKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKN
         R F   LK   Y+  +       R K+ A D++ +  LI +    YV+  LR K++++ YD + +IS+   DEK+ L DL  +LFD  + L+ AAK+K+
Subjt:  TRSF---LKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKN

Query:  LSETASYYQQTTPILQEVMDRM
         S+   YY +T   L EV+ ++
Subjt:  LSETASYYQQTTPILQEVMDRM

AT4G21280.2 photosystem II subunit QA3.1e-1528.44Show/hide
Query:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFL----KKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLD-GPLPVPS------VDNNI
        MA +  L+G   A        N   RL  +G +    + +  V + Q   T R ++  LV+  L G +  +   A+   +  GP P PS       DN+ 
Subjt:  MARLANLNGKFSATPNLPKLQNIHKRLKITGFL----KKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLD-GPLPVPS------VDNNI

Query:  VNEQTGTRSFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAK
         ++       LK   Y+  +       R K+ A D++ +  LI +    YV+  LR K++++ YD + +IS+   DEK+ L DL  +LFD  + L+ AAK
Subjt:  VNEQTGTRSFLKIGIYIANIGTKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAK

Query:  QKNLSETASYYQQTTPILQEVMDRM
        +K+ S+   YY +T   L EV+ ++
Subjt:  QKNLSETASYYQQTTPILQEVMDRM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGTCTTGCAAATTTAAACGGGAAATTCTCCGCCACTCCCAATCTCCCAAAGCTTCAAAACATTCATAAGAGACTTAAAATTACTGGGTTCCTCAAGAAACAAAC
AGATGTTTCTTCTCATCAAATCTCATTGACAAGAAGATTGGCTTTAACCAGCCTCGTCTCTGTTGCTCTCTTTGGTAATGCATCCCCCGAGATTGCTTCTGCTAACGAGT
ATTGGCTCGACGGCCCTTTGCCTGTCCCTTCTGTTGACAACAACATTGTGAATGAGCAAACGGGGACTCGATCGTTTCTGAAGATAGGGATATACATAGCTAACATAGGA
ACAAAAGGAAGAAAATACAGATTGAAAAAATATGCATTTGATCTTCTGGCTATGGCAGATTTGATTGGGAAAGATACTTTGAATTATGTCAGAAAGTATCTTAGACTCAA
ATCAACCTTCATGTACTATGATTTTGACAAAGTTATCTCAGCAGCAGCAGACGATGAGAAGCAGCCTCTTGTTGATTTAGCAAACAGATTATTCGACAATTTTGAAAAGC
TTGAAGATGCAGCAAAGCAAAAGAATCTGAGTGAAACTGCATCCTACTATCAACAAACAACACCGATACTTCAAGAAGTCATGGATAGAATGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGTCTTGCAAATTTAAACGGGAAATTCTCCGCCACTCCCAATCTCCCAAAGCTTCAAAACATTCATAAGAGACTTAAAATTACTGGGTTCCTCAAGAAACAAAC
AGATGTTTCTTCTCATCAAATCTCATTGACAAGAAGATTGGCTTTAACCAGCCTCGTCTCTGTTGCTCTCTTTGGTAATGCATCCCCCGAGATTGCTTCTGCTAACGAGT
ATTGGCTCGACGGCCCTTTGCCTGTCCCTTCTGTTGACAACAACATTGTGAATGAGCAAACGGGGACTCGATCGTTTCTGAAGATAGGGATATACATAGCTAACATAGGA
ACAAAAGGAAGAAAATACAGATTGAAAAAATATGCATTTGATCTTCTGGCTATGGCAGATTTGATTGGGAAAGATACTTTGAATTATGTCAGAAAGTATCTTAGACTCAA
ATCAACCTTCATGTACTATGATTTTGACAAAGTTATCTCAGCAGCAGCAGACGATGAGAAGCAGCCTCTTGTTGATTTAGCAAACAGATTATTCGACAATTTTGAAAAGC
TTGAAGATGCAGCAAAGCAAAAGAATCTGAGTGAAACTGCATCCTACTATCAACAAACAACACCGATACTTCAAGAAGTCATGGATAGAATGGCATAA
Protein sequenceShow/hide protein sequence
MARLANLNGKFSATPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFLKIGIYIANIG
TKGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDNFEKLEDAAKQKNLSETASYYQQTTPILQEVMDRMA