| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_008461807.1 PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 11 [Cucumis melo] | 2.30e-68 | 98.15 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFETQ
LKNAFE +
Subjt: LKNAFETQ
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| XP_011651771.1 DNA-directed RNA polymerases II, IV and V subunit 11 isoform X1 [Cucumis sativus] | 2.30e-68 | 98.15 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFETQ
LKNAFE +
Subjt: LKNAFETQ
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| XP_015866049.1 DNA-directed RNA polymerases II, IV and V subunit 11-like [Ziziphus jujuba] | 4.62e-68 | 96.3 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFT+ERE+HTIGNILRMQLH+DENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFETQ
LKNAFET+
Subjt: LKNAFETQ
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| XP_015884348.1 DNA-directed RNA polymerases II, IV and V subunit 11 [Ziziphus jujuba] | 1.62e-68 | 97.22 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFT+ERE+HTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFETQ
LKNAFET+
Subjt: LKNAFETQ
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| XP_031738335.1 DNA-directed RNA polymerases II, IV and V subunit 11 isoform X2 [Cucumis sativus] | 6.63e-69 | 100 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFET
LKNAFET
Subjt: LKNAFET
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LCD5 RNA_pol_L_2 domain-containing protein | 6.5e-53 | 98.15 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFETQ
LKNAFE +
Subjt: LKNAFETQ
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| A0A1S3CG10 DNA-directed RNA polymerases II, IV and V subunit 11 | 6.5e-53 | 98.15 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFETQ
LKNAFE +
Subjt: LKNAFETQ
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| A0A2P5CHS2 DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site | 1.1e-52 | 97.22 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIERE+HTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFETQ
LKN FET+
Subjt: LKNAFETQ
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| A0A6P3YRI5 DNA-directed RNA polymerases II, IV and V subunit 11-like | 1.1e-52 | 96.3 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFT+ERE+HTIGNILRMQLH+DENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFETQ
LKNAFET+
Subjt: LKNAFETQ
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| A0A6P3ZY21 DNA-directed RNA polymerases II, IV and V subunit 11 | 5.0e-53 | 97.22 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFT+ERE+HTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFETQ
LKNAFET+
Subjt: LKNAFETQ
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P52435 DNA-directed RNA polymerase II subunit RPB11-a | 3.8e-26 | 52.38 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP +E F++ EG KK++ +DTK+ NA FTI +E+HT+GNI++ QL +D VLFAGYK+PHPL++KII+R+ TT SP +A+ AI DL EL
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAF
L+ F
Subjt: LKNAF
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| Q32P79 DNA-directed RNA polymerase II subunit RPB11 | 3.8e-26 | 52.38 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP +E F++ EG KK++ +DTK+ NA FTI +E+HT+GNI++ QL +D VLFAGYK+PHPL++KII+R+ TT SP +A+ AI DL EL
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAF
L+ F
Subjt: LKNAF
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| Q38859 DNA-directed RNA polymerases II, IV and V subunit 11 | 1.2e-51 | 87.39 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP+RYERFVVPEGTKKVSY+RDTKIINAASFT+ERE+HTIGNI+RMQLHRDENVLFAGY+LPHPL+YKIIVRIHTTSQSSPMQAYNQAINDLDKELD+
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFETQTLR
LKN FE + +
Subjt: LKNAFETQTLR
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| Q86JJ5 DNA-directed RNA polymerase II subunit rpb11 | 5.9e-27 | 49.07 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDR+E FV+P+G KKV+ RDTKI NA+ FTI +E+HTIGN++RMQL D++++FAGY++PHPL++ + +RI T + ++P++ +++ L +E
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFETQ
L+N+F Q
Subjt: LKNAFETQ
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| Q9VJE4 DNA-directed RNA polymerase II subunit RPB11 | 3.8e-26 | 52.83 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP +E F++ EG KK+ E DTK+ NAA FTI +E+HT+GN++R QL +D NVLFAGYK+PHPL++K ++RI TT+ SP +A+ AI DL EL
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFE
+ F+
Subjt: LKNAFE
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G29540.1 RNApolymerase 14 kDa subunit | 1.8e-07 | 30.38 | Show/hide |
Query: INAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFE
++ ASFT+ E+HT+ N +R L++D V A Y +PHP ++ +R+ TT + + + A +L + H+++ F+
Subjt: INAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFE
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| AT2G29540.2 RNApolymerase 14 kDa subunit | 1.8e-07 | 30.38 | Show/hide |
Query: INAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFE
++ ASFT+ E+HT+ N +R L++D V A Y +PHP ++ +R+ TT + + + A +L + H+++ F+
Subjt: INAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKNAFE
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| AT3G52090.1 DNA-directed RNA polymerase, RBP11-like | 8.4e-53 | 87.39 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP+RYERFVVPEGTKKVSY+RDTKIINAASFT+ERE+HTIGNI+RMQLHRDENVLFAGY+LPHPL+YKIIVRIHTTSQSSPMQAYNQAINDLDKELD+
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LKNAFETQTLR
LKN FE + +
Subjt: LKNAFETQTLR
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| AT3G52090.2 DNA-directed RNA polymerase, RBP11-like | 4.8e-48 | 68.79 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVR--------------------------
MNAP+RYERFVVPEGTKKVSY+RDTKIINAASFT+ERE+HTIGNI+RMQLHRDENVLFAGY+LPHPL+YKIIVR
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNILRMQLHRDENVLFAGYKLPHPLQYKIIVR--------------------------
Query: ----IHTTSQSSPMQAYNQAINDLDKELDHLKNAFETQTLR
IHTTSQSSPMQAYNQAINDLDKELD+LKN FE + +
Subjt: ----IHTTSQSSPMQAYNQAINDLDKELDHLKNAFETQTLR
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