CuGenDBv2

Gene ID	Chy4G079930
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	protein RRC1-like isoform X1
Genome location	chrH04:19283431..19285771
RNA-Seq Expression	Chy4G079930
Synteny	Chy4G079930
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008445587.2 PREDICTED: protein RRC1-like isoform X1 [Cucumis melo]

5.42e-117

56.48

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Query:  MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEII
        +E+ERTLTDSQRDEFEDML+ALTLERSQIKEAM FALDN DAAGE                                      N   Y    + T  +II
Subjt:  MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEII

Query:  AS--------------------VVRLVYV--------HAYVNGME-------NSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKE
         S                    V++L+ V         AYVNG+        NSGVIPFHSLCGDAPEIERKANCDDLGD +KINQDAELAMGKGGAMKE
Subjt:  AS--------------------VVRLVYV--------HAYVNGME-------NSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKE

Query:  LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLGDDEADFQRMG--------
        LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEA+KLSGYELDEDLKY+NSHS RYSSSSRETKVERGP E  GWS  GDDEADFQRMG        
Subjt:  LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLGDDEADFQRMG--------

Query:  --------------------------------------------------------DGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYR
                                                                DGPSKADEMEITTE +AL QPDSGLNE QRQKLRRVEVA IEYR
Subjt:  --------------------------------------------------------DGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYR

Query:  ESLEERRIK
        ESLEER IK
Subjt:  ESLEERRIK

XP_011650200.2 protein RRC1 [Cucumis sativus]

3.86e-117

56.72

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Query:  MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEII
        ME+ERTLTDSQRDEFEDML+ALTLERSQIKEAM FALDN DAAGE                                      N   Y    + T  +II
Subjt:  MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEII

Query:  AS--------------------VVRLVYV--------HAYVNGME-------NSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKE
         S                    V++L+ V         AYVNG+        NSGVIPFHSLCGDAPEIERKANCDD GD SKINQDAELAMGKGGAMKE
Subjt:  AS--------------------VVRLVYV--------HAYVNGME-------NSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKE

Query:  LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLGDDEADFQRMG--------
        LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEA+KLSGYELDEDLKY+NSHS RYSSSSRETKVERGP E  GWS  GDDEADFQRMG        
Subjt:  LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLGDDEADFQRMG--------

Query:  --------------------------------------------------------DGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYR
                                                                DGPSKADEMEITTE +AL+QPDSGLNE QRQKLRRVEVA IEYR
Subjt:  --------------------------------------------------------DGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYR

Query:  ESLEERRIK
        ESLEER IK
Subjt:  ESLEERRIK

XP_016900007.1 PREDICTED: protein RRC1-like isoform X2 [Cucumis melo]

3.41e-118

56.48

Show/hide

Query:  MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEII
        +E+ERTLTDSQRDEFEDML+ALTLERSQIKEAM FALDN DAAGE                                      N   Y    + T  +II
Subjt:  MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEII

Query:  AS--------------------VVRLVYV--------HAYVNGME-------NSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKE
         S                    V++L+ V         AYVNG+        NSGVIPFHSLCGDAPEIERKANCDDLGD +KINQDAELAMGKGGAMKE
Subjt:  AS--------------------VVRLVYV--------HAYVNGME-------NSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKE

Query:  LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLGDDEADFQRMG--------
        LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEA+KLSGYELDEDLKY+NSHS RYSSSSRETKVERGP E  GWS  GDDEADFQRMG        
Subjt:  LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLGDDEADFQRMG--------

Query:  --------------------------------------------------------DGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYR
                                                                DGPSKADEMEITTE +AL QPDSGLNE QRQKLRRVEVA IEYR
Subjt:  --------------------------------------------------------DGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYR

Query:  ESLEERRIK
        ESLEER IK
Subjt:  ESLEERRIK

XP_038884579.1 protein RRC1-like isoform X1 [Benincasa hispida]

4.82e-114

55.5

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Query:  MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEII
        +E+ERTLTDSQRDEFEDML+ALTLERSQIKEAM FALDN DAAGE                                      N   Y    + T  +II
Subjt:  MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEII

Query:  AS--------------------VVRLVYV--------HAYVNGME-------NSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKE
         S                    V++L+ V         AYVNG+        NSGVIPFHSLCGDAPEIERKANCDDLGD SKINQDAELAMGKGGAMKE
Subjt:  AS--------------------VVRLVYV--------HAYVNGME-------NSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKE

Query:  LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLGDDEADFQRMG--------
        LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEA+K SGYELDEDLKY+NSHS RYSSSSRETK ER P EI GW+  GD+EADFQRMG        
Subjt:  LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLGDDEADFQRMG--------

Query:  --------------------------------------------------------DGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYR
                                                                DGPSKADEMEITTE + L+QPDSGLNE QRQKLRRVEVA IEYR
Subjt:  --------------------------------------------------------DGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYR

Query:  ESLEERRIK
        ESLEER IK
Subjt:  ESLEERRIK

XP_038884580.1 protein RRC1-like isoform X2 [Benincasa hispida]

3.21e-115

55.5

Show/hide

Query:  MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEII
        +E+ERTLTDSQRDEFEDML+ALTLERSQIKEAM FALDN DAAGE                                      N   Y    + T  +II
Subjt:  MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEII

Query:  AS--------------------VVRLVYV--------HAYVNGME-------NSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKE
         S                    V++L+ V         AYVNG+        NSGVIPFHSLCGDAPEIERKANCDDLGD SKINQDAELAMGKGGAMKE
Subjt:  AS--------------------VVRLVYV--------HAYVNGME-------NSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKE

Query:  LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLGDDEADFQRMG--------
        LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEA+K SGYELDEDLKY+NSHS RYSSSSRETK ER P EI GW+  GD+EADFQRMG        
Subjt:  LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLGDDEADFQRMG--------

Query:  --------------------------------------------------------DGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYR
                                                                DGPSKADEMEITTE + L+QPDSGLNE QRQKLRRVEVA IEYR
Subjt:  --------------------------------------------------------DGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYR

Query:  ESLEERRIK
        ESLEER IK
Subjt:  ESLEERRIK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LM94 Uncharacterized protein

5.9e-99

56.72

Show/hide

Query:  MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEII
        ME+ERTLTDSQRDEFEDML+ALTLERSQIKEAM FALDN DAAGE                                      N   Y    + T  +II
Subjt:  MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEII

Query:  AS--------------------VVRLVYV--------HAYVNGME-------NSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKE
         S                    V++L+ V         AYVNG+        NSGVIPFHSLCGDAPEIERKANCDD GD SKINQDAELAMGKGGAMKE
Subjt:  AS--------------------VVRLVYV--------HAYVNGME-------NSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKE

Query:  LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLGDDEADFQRM---------
        LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEA+KLSGYELDEDLKY+NSHS RYSSSSRETKVERGP E  GWS  GDDEADFQRM         
Subjt:  LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLGDDEADFQRM---------

Query:  -------------------------------------------------------GDGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYR
                                                               GDGPSKADEMEITTE +AL+QPDSGLNE QRQKLRRVEVA IEYR
Subjt:  -------------------------------------------------------GDGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYR

Query:  ESLEERRIK
        ESLEER IK
Subjt:  ESLEERRIK

A0A1S3BD28 protein RRC1-like isoform X1

7.7e-99

56.48

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Query:  MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEII
        +E+ERTLTDSQRDEFEDML+ALTLERSQIKEAM FALDN DAAGE                                      N   Y    + T  +II
Subjt:  MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEII

Query:  AS--------------------VVRLVYV--------HAYVNGME-------NSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKE
         S                    V++L+ V         AYVNG+        NSGVIPFHSLCGDAPEIERKANCDDLGD +KINQDAELAMGKGGAMKE
Subjt:  AS--------------------VVRLVYV--------HAYVNGME-------NSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKE

Query:  LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLGDDEADFQRM---------
        LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEA+KLSGYELDEDLKY+NSHS RYSSSSRETKVERGP E  GWS  GDDEADFQRM         
Subjt:  LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLGDDEADFQRM---------

Query:  -------------------------------------------------------GDGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYR
                                                               GDGPSKADEMEITTE +AL QPDSGLNE QRQKLRRVEVA IEYR
Subjt:  -------------------------------------------------------GDGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYR

Query:  ESLEERRIK
        ESLEER IK
Subjt:  ESLEERRIK

A0A1S4DVL5 protein RRC1-like isoform X2

7.7e-99

56.48

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Query:  MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEII
        +E+ERTLTDSQRDEFEDML+ALTLERSQIKEAM FALDN DAAGE                                      N   Y    + T  +II
Subjt:  MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEII

Query:  AS--------------------VVRLVYV--------HAYVNGME-------NSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKE
         S                    V++L+ V         AYVNG+        NSGVIPFHSLCGDAPEIERKANCDDLGD +KINQDAELAMGKGGAMKE
Subjt:  AS--------------------VVRLVYV--------HAYVNGME-------NSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKE

Query:  LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLGDDEADFQRM---------
        LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEA+KLSGYELDEDLKY+NSHS RYSSSSRETKVERGP E  GWS  GDDEADFQRM         
Subjt:  LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLGDDEADFQRM---------

Query:  -------------------------------------------------------GDGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYR
                                                               GDGPSKADEMEITTE +AL QPDSGLNE QRQKLRRVEVA IEYR
Subjt:  -------------------------------------------------------GDGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYR

Query:  ESLEERRIK
        ESLEER IK
Subjt:  ESLEERRIK

A0A5A7VGM8 Protein RRC1-like isoform X1

7.7e-99

56.48

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Query:  MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEII
        +E+ERTLTDSQRDEFEDML+ALTLERSQIKEAM FALDN DAAGE                                      N   Y    + T  +II
Subjt:  MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEII

Query:  AS--------------------VVRLVYV--------HAYVNGME-------NSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKE
         S                    V++L+ V         AYVNG+        NSGVIPFHSLCGDAPEIERKANCDDLGD +KINQDAELAMGKGGAMKE
Subjt:  AS--------------------VVRLVYV--------HAYVNGME-------NSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKE

Query:  LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLGDDEADFQRM---------
        LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEA+KLSGYELDEDLKY+NSHS RYSSSSRETKVERGP E  GWS  GDDEADFQRM         
Subjt:  LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLGDDEADFQRM---------

Query:  -------------------------------------------------------GDGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYR
                                                               GDGPSKADEMEITTE +AL QPDSGLNE QRQKLRRVEVA IEYR
Subjt:  -------------------------------------------------------GDGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYR

Query:  ESLEERRIK
        ESLEER IK
Subjt:  ESLEERRIK

A0A6J1HE85 protein RRC1-like

5.9e-91

53.3

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Query:  MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE------------------------------HNK----------------------
        +E+ERTLTDSQRDEFEDML+ALTLERSQIKEAM FALDN DAAGE                              HN                       
Subjt:  MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE------------------------------HNK----------------------

Query:  ENY-----GISPQGTSIEIIASVVRLVYV--------HAYVNGME-------NSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKE
        E++     GI+ + T+  +   V++L+ V         AYVNG+        NSGV  FHSLCGDAPEIER+ANC++LGD SKINQDAELAMGKGGAMKE
Subjt:  ENY-----GISPQGTSIEIIASVVRLVYV--------HAYVNGME-------NSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKE

Query:  LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLGDDEADFQRM---------
        LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEA+K SGYELDEDLKY+NS + RYSSSS+ETKVER P EI GW+  GDDEA+FQRM         
Subjt:  LMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLGDDEADFQRM---------

Query:  -------------------------------------------------------GDGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYR
                                                               GDG SK+DEMEITTE + L+QPDSGLNE QRQKLRRVEVA IEYR
Subjt:  -------------------------------------------------------GDGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYR

Query:  ESLEERRIK
        ESLEER IK
Subjt:  ESLEERRIK

SwissProt top hits

e value

%identity

Alignment

F4KIA8 Protein RRC1-like

2.0e-51

38.05

Show/hide

Query:  EIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEIIA
        E E+TLTDSQRDEFEDML+ALTLERSQI+EAM FALDN +AAGE                                      N   Y    + T  +I+ 
Subjt:  EIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEIIA

Query:  S--------------------VVRLVYV--------HAYVNGM-------ENSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKEL
        S                    V++++ V         AY+NG+        N GV  FHS+CGDAP+IE+K    ++ D  KINQDA LAMG+G A +EL
Subjt:  S--------------------VVRLVYV--------HAYVNGM-------ENSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKEL

Query:  MNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYE-LDEDLKYNNSHS---------ERYSSSSRETKVERGPEEILG--------------
        MN P  ELERRCRHNGLSL+GGREMMVARL+ L++A+K  GYE +DE+ KY   HS         +R  +S  + + E  P ++                
Subjt:  MNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYE-LDEDLKYNNSHS---------ERYSSSSRETKVERGPEEILG--------------

Query:  ------------WSLLGDDEADFQR---------MGDGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYRESLEERRIK
                    W+   D+  D Q+          G    K DE ++  + +  VQP++ ++  QRQKLR +E+A IEYRESLEE+ +K
Subjt:  ------------WSLLGDDEADFQR---------MGDGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYRESLEERRIK

Q9C5J3 Protein RRC1

1.0e-52

40.72

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Query:  EIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEIIA
        E+ERTLTD QRDEFEDML+ALTLERSQIKEAM FALDN DAAGE                                      N   Y    + T  +I+ 
Subjt:  EIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEIIA

Query:  S--------------------VVRLVYV--------HAYVNGMEN-------SGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKEL
        S                    V++++ V         AY+ G+ +       SGV  FHS+CGDAPEIE K+  D++ D  KIN DA LA+GKG A +EL
Subjt:  S--------------------VVRLVYV--------HAYVNGMEN-------SGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKEL

Query:  MNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYE-LDEDLKYNNSHS---------ERYSSSSRETKVER-------------------GP
        MNLP  ELERRCRHNGLSLVGGR MMV RLLSLE+ +K  GYE +DE  K+  +HS         E   +S  E +++                    G 
Subjt:  MNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYE-LDEDLKYNNSHS---------ERYSSSSRETKVER-------------------GP

Query:  EE---ILGWS--LLGDDEADFQRMGDGPS----------KADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYRESLEERRIK
        E+   IL  S     DDEAD ++     S          KAD  ++        QPD+G++E QRQK RR+EVA IEYRE+LEE+ +K
Subjt:  EE---ILGWS--LLGDDEADFQRMGDGPS----------KADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYRESLEERRIK

Arabidopsis top hits

e value

%identity

Alignment

AT5G10800.1 RNA recognition motif (RRM)-containing protein

1.4e-52

38.05

Show/hide

Query:  EIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEIIA
        E E+TLTDSQRDEFEDML+ALTLERSQI+EAM FALDN +AAGE                                      N   Y    + T  +I+ 
Subjt:  EIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEIIA

Query:  S--------------------VVRLVYV--------HAYVNGM-------ENSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKEL
        S                    V++++ V         AY+NG+        N GV  FHS+CGDAP+IE+K    ++ D  KINQDA LAMG+G A +EL
Subjt:  S--------------------VVRLVYV--------HAYVNGM-------ENSGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKEL

Query:  MNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYE-LDEDLKYNNSHS---------ERYSSSSRETKVERGPEEILG--------------
        MN P  ELERRCRHNGLSL+GGREMMVARL+ L++A+K  GYE +DE+ KY   HS         +R  +S  + + E  P ++                
Subjt:  MNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYE-LDEDLKYNNSHS---------ERYSSSSRETKVERGPEEILG--------------

Query:  ------------WSLLGDDEADFQR---------MGDGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYRESLEERRIK
                    W+   D+  D Q+          G    K DE ++  + +  VQP++ ++  QRQKLR +E+A IEYRESLEE+ +K
Subjt:  ------------WSLLGDDEADFQR---------MGDGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYRESLEERRIK

AT5G25060.1 RNA recognition motif (RRM)-containing protein

7.4e-54

40.72

Show/hide

Query:  EIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEIIA
        E+ERTLTD QRDEFEDML+ALTLERSQIKEAM FALDN DAAGE                                      N   Y    + T  +I+ 
Subjt:  EIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGE-------------------------------------HNKENYGISPQGTSIEIIA

Query:  S--------------------VVRLVYV--------HAYVNGMEN-------SGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKEL
        S                    V++++ V         AY+ G+ +       SGV  FHS+CGDAPEIE K+  D++ D  KIN DA LA+GKG A +EL
Subjt:  S--------------------VVRLVYV--------HAYVNGMEN-------SGVIPFHSLCGDAPEIERKANCDDLGDESKINQDAELAMGKGGAMKEL

Query:  MNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYE-LDEDLKYNNSHS---------ERYSSSSRETKVER-------------------GP
        MNLP  ELERRCRHNGLSLVGGR MMV RLLSLE+ +K  GYE +DE  K+  +HS         E   +S  E +++                    G 
Subjt:  MNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYE-LDEDLKYNNSHS---------ERYSSSSRETKVER-------------------GP

Query:  EE---ILGWS--LLGDDEADFQRMGDGPS----------KADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYRESLEERRIK
        E+   IL  S     DDEAD ++     S          KAD  ++        QPD+G++E QRQK RR+EVA IEYRE+LEE+ +K
Subjt:  EE---ILGWS--LLGDDEADFQRMGDGPS----------KADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYRESLEERRIK

Sequences

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CDS sequence

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ATGGAGATTGAAAGAACATTAACTGATTCACAAAGGGATGAGTTTGAGGACATGCTTCAGGCATTGACACTAGAAAGGAGTCAGATAAAGGAAGCAATGAGGTTT
GCTTTGGATAACGTTGATGCAGCTGGAGAGCATAACAAGGAGAATTACGGCATAAGCCCTCAAGGAACGAGTATTGAAATTATTGCAAGTGTGGTCCGATTGGTT
TATGTTCATGCTTATGTGAATGGAATGGAAAACTCTGGTGTGATCCCTTTTCATTCATTATGTGGTGATGCCCCCGAGATTGAACGGAAGGCCAATTGTGATGAT
TTAGGAGATGAGAGTAAAATCAATCAAGATGCTGAATTGGCAATGGGCAAAGGAGGAGCTATGAAGGAGTTAATGAATCTTCCCTTTGGAGAATTGGAAAGGCGG
TGCAGGCACAATGGGTTGTCTCTTGTTGGTGGTAGAGAAATGATGGTTGCACGTTTACTAAGTCTTGAAGAGGCAAAAAAACTGAGTGGATATGAACTTGATGAA
GACTTAAAATATAATAATTCTCATTCTGAAAGATATTCAAGTAGCTCAAGAGAGACTAAAGTTGAACGAGGTCCAGAAGAAATTTTGGGTTGGAGCCTTTTGGGG
GATGATGAGGCAGATTTCCAAAGGATGGGTGATGGTCCTAGTAAAGCTGATGAGATGGAGATTACTACGGAGCAAACTGCCCTTGTGCAACCTGATAGTGGGTTG
AATGAAGGGCAGAGGCAAAAGTTAAGACGTGTAGAAGTAGCTTTTATTGAATACCGTGAATCATTAGAAGAACGGAGAATCAAAA

mRNA sequence

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Protein sequence

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MEIERTLTDSQRDEFEDMLQALTLERSQIKEAMRFALDNVDAAGEHNKENYGISPQGTSIEIIASVVRLVYVHAYVNGMENSGVIPFHSLCGDAPEIERKANCDD
LGDESKINQDAELAMGKGGAMKELMNLPFGELERRCRHNGLSLVGGREMMVARLLSLEEAKKLSGYELDEDLKYNNSHSERYSSSSRETKVERGPEEILGWSLLG
DDEADFQRMGDGPSKADEMEITTEQTALVQPDSGLNEGQRQKLRRVEVAFIEYRESLEERRIKX

Chy4G079930 (gene) of Cucumber (hystrix) v1 genome