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Chy4G080210 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G080210
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionnuclear envelope integral membrane protein 1 isoform X1
Genome locationchrH04:19519559..19520266
RNA-Seq ExpressionChy4G080210
SyntenyChy4G080210
Gene Ontology termsGO:0005637 - nuclear inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461773.1 PREDICTED: uncharacterized protein LOC103500297 [Cucumis melo]6.36e-3858.7Show/hide
Query:  MALKVVDATVSHVNTNQFRSQLPYKKSNFIFFLADKDHSASLSLCPDEKSFGSVLRSRKSI---TLFRASTCLVFLELFFASAYSTPDPAELRLLVSEPT
        M LKVVDATVS+VN +Q RS+    K NF  FLA    ++ +  CP++ +F SVL +RK     +LF+ASTCLVFL +FF SAYST DP ELRL+VS+  
Subjt:  MALKVVDATVSHVNTNQFRSQLPYKKSNFIFFLADKDHSASLSLCPDEKSFGSVLRSRKSI---TLFRASTCLVFLELFFASAYSTPDPAELRLLVSEPT

Query:  TTLQLSRGLPVKTSSGSRPGAMMVCERVYIQGLQRLHT
        TT+QLSRGLPVK S GS P  +MVCERVYIQGL R   
Subjt:  TTLQLSRGLPVKTSSGSRPGAMMVCERVYIQGLQRLHT

XP_011651793.1 uncharacterized protein LOC101210632 isoform X1 [Cucumis sativus]3.94e-4464.23Show/hide
Query:  MALKVVDATVSHVNT--NQFRSQLPYKKSNFIFFLADKDHSASLSLCPDEKSFGSVLRSRKSI---TLFRASTCLVFLELFFASAYSTPDPAELRLLVSE
        M LKVVDATVS  +   ++FRS+LP  K+NFI FLADKD S S S CP++ SF S+LR+RKS+   TLFRASTCL+FL +FFAS Y T DP + RL+VSE
Subjt:  MALKVVDATVSHVNT--NQFRSQLPYKKSNFIFFLADKDHSASLSLCPDEKSFGSVLRSRKSI---TLFRASTCLVFLELFFASAYSTPDPAELRLLVSE

Query:  PTTTLQLSRGLPVKTSSGSRPGAMMVCERVYIQGLQR
         +TT+QLS GLPVK S GSRPG ++ CERVYIQGL R
Subjt:  PTTTLQLSRGLPVKTSSGSRPGAMMVCERVYIQGLQR

XP_016902769.1 PREDICTED: nuclear envelope integral membrane protein 1 isoform X1 [Cucumis melo]7.67e-4463.5Show/hide
Query:  MALKVVDATVSHVNT--NQFRSQLPYKKSNFIFFLADKDHSASLSLCPDEKSFGSVLRSRKSIT---LFRASTCLVFLELFFASAYSTPDPAELRLLVSE
        M LKVVDAT+S  N   ++FRSQLP  K+NFI FLADKD S S S CP++ SF S+LR+RKS+    LFRASTCL+FL +FFAS Y T DP + RL+VSE
Subjt:  MALKVVDATVSHVNT--NQFRSQLPYKKSNFIFFLADKDHSASLSLCPDEKSFGSVLRSRKSIT---LFRASTCLVFLELFFASAYSTPDPAELRLLVSE

Query:  PTTTLQLSRGLPVKTSSGSRPGAMMVCERVYIQGLQR
         +TT+QLS GLPVK S GS+PG ++ CERVYIQGL R
Subjt:  PTTTLQLSRGLPVKTSSGSRPGAMMVCERVYIQGLQR

XP_038905972.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120091886 [Benincasa hispida]2.87e-4666.91Show/hide
Query:  MALKVVDATVSHVNTNQFRSQLPYKKSNFIFFLADKDH-SASLSLCPDEKSFGSVLRSRKSI---TLFRASTCLVFLELFFASAYSTPDPAELRLLVSEP
        M +KVV+ATVS  N N+FRS+LP  K NFI FL ++D  S SLS CP+++SF SVL +RKS+   T FRASTCL+FL +FFASAYSTPDP +LRL+VSE 
Subjt:  MALKVVDATVSHVNTNQFRSQLPYKKSNFIFFLADKDH-SASLSLCPDEKSFGSVLRSRKSI---TLFRASTCLVFLELFFASAYSTPDPAELRLLVSEP

Query:  TTTLQLSRGLPVKTSSGSRPGAMMVCERVYIQGLQR
        +TT+QLS GLPVK SSGS PG +MVCERVYIQGL R
Subjt:  TTTLQLSRGLPVKTSSGSRPGAMMVCERVYIQGLQR

XP_038906035.1 uncharacterized protein LOC120091936 [Benincasa hispida]7.26e-4666.42Show/hide
Query:  MALKVVDATVSHVNT--NQFRSQLPYKKSNFIFFLADKDHSASLSLCPDEKSFGSVLRSRKSI---TLFRASTCLVFLELFFASAYSTPDPAELRLLVSE
        M +KVVDATVS  N    +FRS+LP  K+N I FLADKD S SLS CP+++SF SVLR+ KS+   TLFRASTCL+FL +FFASAYST DP ELRL+VS+
Subjt:  MALKVVDATVSHVNT--NQFRSQLPYKKSNFIFFLADKDHSASLSLCPDEKSFGSVLRSRKSI---TLFRASTCLVFLELFFASAYSTPDPAELRLLVSE

Query:  PTTTLQLSRGLPVKTSSGSRPGAMMVCERVYIQGLQR
         +TT+QLS G PVK+S GSRPG ++VCERVYIQGL R
Subjt:  PTTTLQLSRGLPVKTSSGSRPGAMMVCERVYIQGLQR

TrEMBL top hitse value%identityAlignment
A0A0A0LD37 Uncharacterized protein2.9e-2273.03Show/hide
Query:  DEKSFGSVLRSRKSI---TLFRASTCLVFLELFFASAYSTPDPAELRLLVSEPTTTLQLSRGLPVKTSSGSRPGAMMVCERVYIQGLQR
        D+KSFGSVLRSR+S+    LFRASTCLVFL LFFASAYSTPDP ELRLLVSEP T +QL R LPV+ SS SR G + + ERV+IQGLQR
Subjt:  DEKSFGSVLRSRKSI---TLFRASTCLVFLELFFASAYSTPDPAELRLLVSEPTTTLQLSRGLPVKTSSGSRPGAMMVCERVYIQGLQR

A0A1S3CFC0 uncharacterized protein LOC1035002975.8e-3160Show/hide
Query:  MALKVVDATVSHVNTNQFRSQLPYKKSNFIFFLADKDHSASLSLCPDEKSFGSVLRSRKSI---TLFRASTCLVFLELFFASAYSTPDPAELRLLVSEPT
        M LKVVDATVS+VN +Q RS+    K NF  FLA    ++ +  CP++ +F SVL +RK     +LF+ASTCLVFL +FF SAYST DP ELRL+VS+  
Subjt:  MALKVVDATVSHVNTNQFRSQLPYKKSNFIFFLADKDHSASLSLCPDEKSFGSVLRSRKSI---TLFRASTCLVFLELFFASAYSTPDPAELRLLVSEPT

Query:  TTLQLSRGLPVKTSSGSRPGAMMVCERVYIQGLQR
        TT+QLSRGLPVK S GS P  +MVCERVYIQGL R
Subjt:  TTLQLSRGLPVKTSSGSRPGAMMVCERVYIQGLQR

A0A1S3CFH6 uncharacterized protein LOC1035002982.2e-2273.03Show/hide
Query:  DEKSFGSVLRSRKSI---TLFRASTCLVFLELFFASAYSTPDPAELRLLVSEPTTTLQLSRGLPVKTSSGSRPGAMMVCERVYIQGLQR
        D+KSFG VLRSRKS+   TLFRASTCLVFL LFFASAYST DP ELRLLVSEP TT+QL R LPVK SS SR G + + ER++IQGL+R
Subjt:  DEKSFGSVLRSRKSI---TLFRASTCLVFLELFFASAYSTPDPAELRLLVSEPTTTLQLSRGLPVKTSSGSRPGAMMVCERVYIQGLQR

A0A1S4E3G6 nuclear envelope integral membrane protein 1 isoform X16.0e-3663.5Show/hide
Query:  MALKVVDATVSHVNT--NQFRSQLPYKKSNFIFFLADKDHSASLSLCPDEKSFGSVLRSRKSIT---LFRASTCLVFLELFFASAYSTPDPAELRLLVSE
        M LKVVDAT+S  N   ++FRSQLP  K+NFI FLADKD S S S CP++ SF S+LR+RKS+    LFRASTCL+FL +FFAS Y T DP + RL+VSE
Subjt:  MALKVVDATVSHVNT--NQFRSQLPYKKSNFIFFLADKDHSASLSLCPDEKSFGSVLRSRKSIT---LFRASTCLVFLELFFASAYSTPDPAELRLLVSE

Query:  PTTTLQLSRGLPVKTSSGSRPGAMMVCERVYIQGLQR
         +TT+QLS GLPVK S GS+PG ++ CERVYIQGL R
Subjt:  PTTTLQLSRGLPVKTSSGSRPGAMMVCERVYIQGLQR

A0A5D3CHE8 Nuclear envelope integral membrane protein 1 isoform X12.9e-2251.49Show/hide
Query:  MALKVVDATVSHVNT--NQFRSQLPYKKSNFIFFLADKDHSASLSLCPDEKSFGSVLRSRKSITLFRASTCLVFLELFFASAYSTPDPAELRLLVSEPTT
        M LKVVDAT+S  N   ++FRSQLP  K+NFI FLADKD S S S CP                            +FFAS Y T DP + RL+VSE +T
Subjt:  MALKVVDATVSHVNT--NQFRSQLPYKKSNFIFFLADKDHSASLSLCPDEKSFGSVLRSRKSITLFRASTCLVFLELFFASAYSTPDPAELRLLVSEPTT

Query:  TLQLSRGLPVKTSSGSRPGAMMVCERVYIQGLQR
        T+QLS GLPVK S GS+PG ++ CERVYIQGL R
Subjt:  TLQLSRGLPVKTSSGSRPGAMMVCERVYIQGLQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTGAAGGTAGTGGACGCCACCGTCTCCCACGTCAATACTAACCAATTCCGATCACAACTCCCATACAAGAAATCTAATTTCATCTTCTTCTTGGCCGACAAAGA
CCATTCTGCTTCTCTCAGCTTGTGTCCCGACGAAAAGAGCTTCGGCTCTGTCCTTCGATCCAGAAAAAGCATAACGCTGTTTCGAGCTTCTACTTGCCTTGTATTTCTTG
AACTGTTCTTCGCTTCAGCCTACTCCACTCCTGACCCTGCAGAGCTTCGTCTTCTTGTCTCTGAACCCACCACAACTTTACAACTATCTCGTGGCTTGCCTGTGAAAACT
TCTTCAGGTTCCAGACCTGGAGCTATGATGGTTTGTGAAAGAGTATACATCCAAGGATTGCAGAGGTTGCACACACCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTGAAGGTAGTGGACGCCACCGTCTCCCACGTCAATACTAACCAATTCCGATCACAACTCCCATACAAGAAATCTAATTTCATCTTCTTCTTGGCCGACAAAGA
CCATTCTGCTTCTCTCAGCTTGTGTCCCGACGAAAAGAGCTTCGGCTCTGTCCTTCGATCCAGAAAAAGCATAACGCTGTTTCGAGCTTCTACTTGCCTTGTATTTCTTG
AACTGTTCTTCGCTTCAGCCTACTCCACTCCTGACCCTGCAGAGCTTCGTCTTCTTGTCTCTGAACCCACCACAACTTTACAACTATCTCGTGGCTTGCCTGTGAAAACT
TCTTCAGGTTCCAGACCTGGAGCTATGATGGTTTGTGAAAGAGTATACATCCAAGGATTGCAGAGGTTGCACACACCGTGA
Protein sequenceShow/hide protein sequence
MALKVVDATVSHVNTNQFRSQLPYKKSNFIFFLADKDHSASLSLCPDEKSFGSVLRSRKSITLFRASTCLVFLELFFASAYSTPDPAELRLLVSEPTTTLQLSRGLPVKT
SSGSRPGAMMVCERVYIQGLQRLHTP