CuGenDBv2

Gene ID	Chy4G080710
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Transmembrane protein 41B
Genome location	chrH04:20173881..20174200
RNA-Seq Expression	Chy4G080710
Synteny	Chy4G080710
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6581638.1 hypothetical protein SDJN03_21640, partial [Cucurbita argyrosperma subsp. sororia]

4.47e-62

90.57

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Query:  MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS
        MGA WGRWSKLAA+VA+VA+LR+LGK YGWE DREAALKVF QWSDRLGVWAMPAYVG+HTFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGAS
Subjt:  MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS

Query:  LSFWIG
        LSFWIG
Subjt:  LSFWIG

XP_004141157.1 uncharacterized protein LOC101209858 [Cucumis sativus]

1.78e-66

97.17

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Query:  MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS
        MGAAWGRWSKLAAIVA+VAILRQLGK YGWEFDR+AALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS
Subjt:  MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS

Query:  LSFWIG
        LSFWIG
Subjt:  LSFWIG

XP_008465163.1 PREDICTED: uncharacterized protein LOC103502831 [Cucumis melo]

6.77e-64

94.34

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Query:  MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS
        M  AWGRWSKLAA+VA VAILR+LGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGAS
Subjt:  MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS

Query:  LSFWIG
        LSFWIG
Subjt:  LSFWIG

XP_022934149.1 uncharacterized protein LOC111441406 [Cucurbita moschata]

3.15e-62

91.51

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Query:  MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS
        MGA WGRWSKLAA+VA+VAILR+LGK YGWE DREAALKVF QWSDRLGVWAMPAYVG+HTFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGAS
Subjt:  MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS

Query:  LSFWIG
        LSFWIG
Subjt:  LSFWIG

XP_038903022.1 uncharacterized protein LOC120089724 [Benincasa hispida]

1.07e-62

91.51

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Query:  MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS
        MGA WGRWSKLAA+VA VAILR+LGKRYGWE D+EA+LKVF+QWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGAS
Subjt:  MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS

Query:  LSFWIG
        LSFWIG
Subjt:  LSFWIG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LFP4 Uncharacterized protein

3.0e-51

97.17

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Query:  MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS
        MGAAWGRWSKLAAIVA+VAILRQLGK YGWEFDR+AALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS
Subjt:  MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS

Query:  LSFWIG
        LSFWIG
Subjt:  LSFWIG

A0A1S3CN62 uncharacterized protein LOC103502831

2.8e-49

94.34

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Query:  MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS
        M  AWGRWSKLAA+VA VAILR+LGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGAS
Subjt:  MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS

Query:  LSFWIG
        LSFWIG
Subjt:  LSFWIG

A0A6J1F1R5 uncharacterized protein LOC111441406

5.4e-48

91.51

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Query:  MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS
        MGA WGRWSKLAA+VA+VAILR+LGK YGWE DREAALKVF QWSDRLGVWAMPAYVG+HTFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGAS
Subjt:  MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS

Query:  LSFWIG
        LSFWIG
Subjt:  LSFWIG

A0A6J1I539 uncharacterized protein LOC111470758

1.6e-47

89.62

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Query:  MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS
        MG+ WGRW KLAA+VA++AILR+LGKRYGWE DREAALKVF QWSDRLG+WAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGAS
Subjt:  MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS

Query:  LSFWIG
        LSFWIG
Subjt:  LSFWIG

A0A6J1J5V4 uncharacterized protein LOC111481545

1.6e-47

91.51

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Query:  MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS
        MGA WGRWSKLAA+VA+VAILR+LGK YGWE DREAALKVF  WSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVF AKVLGAS
Subjt:  MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGAS

Query:  LSFWIG
        LSFWIG
Subjt:  LSFWIG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G44960.1 SNARE associated Golgi protein family

1.0e-30

63.37

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Query:  RWSKLAAIVALVAIL-RQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWI
        +W  +AA VA++AI+ RQ   +YGW  ++EAAL+   +WSDRLG+WA+P YV +HT TLALCLP+AVFFEA AS+LFGF PA++CVF AKVL AS SFWI
Subjt:  RWSKLAAIVALVAIL-RQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWI

Query:  G
        G
Subjt:  G

Sequences

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CDS sequence

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ATGGGAGCTGCTTGGGGACGGTGGTCCAAATTAGCCGCTATAGTGGCGCTGGTGGCCATTCTTAGACAATTAGGGAAGAGATACGGATGGGAATTTGATAGAGAAGCGGC
TCTCAAGGTTTTCACCCAATGGTCTGATCGATTGGGGGTATGGGCCATGCCTGCCTATGTCGGCATCCATACCTTCACACTTGCTCTCTGTTTGCCTTATGCCGTCTTCT
TCGAAGCCACTGCTTCTTTGCTTTTCGGTTTCTTCCCTGCCGTTATTTGCGTTTTCTTTGCCAAGGTCCTTGGGGCTTCCCTCTCCTTCTGGATCGGCAG

mRNA sequence

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Protein sequence

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MGAAWGRWSKLAAIVALVAILRQLGKRYGWEFDREAALKVFTQWSDRLGVWAMPAYVGIHTFTLALCLPYAVFFEATASLLFGFFPAVICVFFAKVLGASLSFWIGX

Chy4G080710 (gene) of Cucumber (hystrix) v1 genome