CuGenDBv2

Gene ID	Chy4G080990
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	disease resistance protein RGA2-like
Genome location	chrH04:20447846..20448124
RNA-Seq Expression	Chy4G080990
Synteny	Chy4G080990
Gene Ontology terms	GO:0006952 - defense response (biological process) GO:0043531 - ADP binding (molecular function)
InterPro domains	IPR041118 - Rx, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0053845.1 putative disease resistance protein RGA3 [Cucumis melo var. makuwa]

1.23e-51

91.3

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Query:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQN
        MAEFLWTFA+Q VLKTIVKYGAEQIGAAWGLEKEASQLKKQLQ+AAAILADINR+NLHH SVRLWVEDLQ IVYEADDLLDELIYE LRRQ 
Subjt:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQN

TYK25555.1 putative disease resistance protein RGA3 [Cucumis melo var. makuwa]

1.18e-49

91.3

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Query:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQN
        MAEFLWTFA+Q VLKTIVKYGAEQIGAAWGLEKEASQLKKQLQ+AAAILADINR+NLHH SVRLWVEDLQ IVYEADDLLDELIYE LRRQ 
Subjt:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQN

XP_022145126.1 probable disease resistance RPP8-like protein 2 [Momordica charantia]

4.95e-38

73.63

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Query:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQ
        MAEFLWTFAVQEVLK +VK  AEQIG AWGLE+E  +L   L  A AIL DINR+ LHH SVRLWVEDLQH+V+EADDLLDEL+YE LRR+
Subjt:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQ

XP_022145171.1 putative disease resistance protein RGA3 [Momordica charantia]

4.00e-36

72.53

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Query:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQ
        MAEFLWTFAVQEVLK ++K  AEQIG AWGL+KE S+L+K+L  A  IL DINR+ L H SVRLWVEDLQH+VY+ADDLLDEL+YE LRR+
Subjt:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQ

XP_038877689.1 putative disease resistance protein RGA3 [Benincasa hispida]

5.37e-38

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Query:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRR
        MAEFLWTFAVQE+LK IVK+GAEQIG AWGLEKE  QLKK L  A  ILADIN++ LHHH+VRLWVEDLQ IVYEADDLLDEL YE LRR
Subjt:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRR

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UJI3 Putative disease resistance protein RGA3

3.3e-38

92.31

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Query:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQ
        MAEFLWTFA+Q VLKTIVKYGAEQIGAAWGLEKEASQLKKQLQ+AAAILADINR+NLHH SVRLWVEDLQ IVYEADDLLDELIYE LRRQ
Subjt:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQ

A0A5D3DPY5 Putative disease resistance protein RGA3

3.3e-38

92.31

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Query:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQ
        MAEFLWTFA+Q VLKTIVKYGAEQIGAAWGLEKEASQLKKQLQ+AAAILADINR+NLHH SVRLWVEDLQ IVYEADDLLDELIYE LRRQ
Subjt:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQ

A0A6J1CUL8 putative disease resistance protein RGA4

1.6e-27

69.23

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Query:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQ
        MAEFLWTFAVQEVLK ++K  AEQIG AW L+KE S+L+K+L  A  IL DINR  L H SVRLWVEDLQH+VY+ADDLLD+L+YE LR++
Subjt:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQ

A0A6J1CVE9 probable disease resistance RPP8-like protein 2

4.8e-29

73.63

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Query:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQ
        MAEFLWTFAVQEVLK +VK  AEQIG AWGLE+E  +L   L  A AIL DINR+ LHH SVRLWVEDLQH+V+EADDLLDEL+YE LRR+
Subjt:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQ

A0A6J1CVR3 putative disease resistance protein RGA3

1.7e-29

72.53

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Query:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQ
        MAEFLWTFAVQEVLK ++K  AEQIG AWGL+KE S+L+K+L  A  IL DINR+ L H SVRLWVEDLQH+VY+ADDLLDEL+YE LRR+
Subjt:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQ

SwissProt top hits

e value

%identity

Alignment

P0C8S1 Probable disease resistance RPP8-like protein 2

8.9e-04

28.09

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Query:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLR
        MAE + +F V+++ + + +  A       G++++   LK+QL    ++L D + +      VR ++ED++ IVY+ADD+++  +   LR
Subjt:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLR

Q7XA39 Putative disease resistance protein RGA4

6.8e-04

26.25

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Query:  VQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLR
        +Q +L+ +  +  +++   +G EKE  +L        A+L D   + L   ++  W++ L    YE DD+L E   E +R
Subjt:  VQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLR

Q7XA40 Putative disease resistance protein RGA3

3.0e-04

27.5

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Query:  VQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLR
        +Q +L  +  +   ++G  +G EKE  +L        A+L D   + L + +++ W++ L    YE DD+LD+   E  R
Subjt:  VQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLR

Arabidopsis top hits

e value

%identity

Alignment

AT1G53350.1 Disease resistance protein (CC-NBS-LRR class) family

6.3e-05

28.09

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Query:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLR
        MAE + +F V+++ + + +  A       G++++   LK+QL    ++L D + +      VR ++ED++ IVY+ADD+++  +   LR
Subjt:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLR

AT3G14460.1 LRR and NB-ARC domains-containing disease resistance protein

9.1e-04

36.36

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Query:  QLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQ
        +LK  L  A  +LAD ++   H   V+ W+  ++   ++A+D+LDEL  E LRR+
Subjt:  QLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQ

AT5G35450.1 Disease resistance protein (CC-NBS-LRR class) family

3.1e-04

26.97

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Query:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLR
        MAE + +F VQ+ L  ++   +E++    G++++   LK+QL+   ++L D + +      VR ++ED++ +V++A+D+++  +   LR
Subjt:  MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLR

Sequences

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CDS sequence

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ATGGCTGAATTTCTGTGGACTTTTGCTGTTCAAGAAGTTCTGAAGACAATTGTGAAATATGGAGCAGAGCAAATTGGTGCGGCATGGGGCTTGGAGAAGGAGGCCTCCCA
GTTGAAAAAACAGTTACAAAATGCTGCTGCAATCTTAGCTGACATTAACAGAGAGAATTTACATCATCATTCTGTGAGGCTATGGGTGGAAGATCTTCAACATATTGTTT
ATGAAGCTGATGATCTACTGGATGAGCTTATTTATGAAGGTCTTCGACGACAAAACTGA

mRNA sequence

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Protein sequence

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MAEFLWTFAVQEVLKTIVKYGAEQIGAAWGLEKEASQLKKQLQNAAAILADINRENLHHHSVRLWVEDLQHIVYEADDLLDELIYEGLRRQN

Chy4G080990 (gene) of Cucumber (hystrix) v1 genome