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Chy4G082490 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G082490
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptioncullin 3B
Genome locationchrH04:21859768..21864679
RNA-Seq ExpressionChy4G082490
SyntenyChy4G082490
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0031625 - ubiquitin protein ligase binding (molecular function)
InterPro domainsIPR016159 - Cullin repeat-like-containing domain superfamily
IPR045093 - Cullin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053753.1 Cullin-3 [Cucumis melo var. makuwa]1.00e-2794.64Show/hide
Query:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSFI
        MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELY  +
Subjt:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSFI
MBA0637252.1 hypothetical protein [Gossypium davidsonii]5.78e-2886.89Show/hide
Query:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSFITSIPP
        MS QKKRNFQIEAFKHRVVVDPKYAEKTW ILEHAIHEIYNHNASGLSFEELY F   + P
Subjt:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSFITSIPP
MBA0751206.1 hypothetical protein [Gossypium gossypioides]1.16e-2785.71Show/hide
Query:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSFITSIPPDI
        MS QKKRNFQIEAFKHRVVVDPKYAEKTW ILEHAIHEIYNHNASGLSFEELY F    PP +
Subjt:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSFITSIPPDI
PWA40240.1 Cullin-3 [Artemisia annua]1.13e-2885.71Show/hide
Query:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSFITSIPPDI
        MS+QKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELY       PD+
Subjt:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSFITSIPPDI
RVW31396.1 Cullin-3B [Vitis vinifera]1.33e-2891.38Show/hide
Query:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSFITS
        MS QKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELY  + S
Subjt:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSFITS
TrEMBL top hitse value%identityAlignment
A0A2U1KU12 Cullin-31.2e-2185.71Show/hide
Query:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSFITSIPPDI
        MS+QKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELY       PD+
Subjt:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSFITSIPPDI
A0A438D7G9 Cullin-3B2.0e-2191.38Show/hide
Query:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSFITS
        MS QKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELY  + S
Subjt:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSFITS
A0A6A4MBG3 CULLIN_2 domain-containing protein (Fragment)6.9e-2298.18Show/hide
Query:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSF
        MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELY F
Subjt:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSF
A0A7J7G2P8 CULLIN_2 domain-containing protein6.9e-2264.21Show/hide
Query:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSFITSIPPDICTQNIAHGAKASKQERWQ--VSSARSLERAKW
        MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYS+          + I +  +  +   W+  V+S   L R +W
Subjt:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSFITSIPPDICTQNIAHGAKASKQERWQ--VSSARSLERAKW
A0A7N0V6J9 Uncharacterized protein3.1e-2287.3Show/hide
Query:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSFITSIPPDI
        MS QKKRNFQIEAFKHRVVVDPKY+EKTWKILEHAIHEIYNHNASGLSFEELY  +T I  DI
Subjt:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSFITSIPPDI
SwissProt top hitse value%identityAlignment
Q54NZ5 Cullin-35.7e-0552.63Show/hide
Query:  HRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELY
        H V+ DP + ++TWK+L+ A+ +I+  NAS LSFEELY
Subjt:  HRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELY
Q9C9L0 Cullin-3B6.7e-2294.34Show/hide
Query:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELY
        MS QKKRNFQIEAFK RVVVDPKYA+KTWKILEHAIHEIYNHNASGLSFEELY
Subjt:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELY
Q9ZVH4 Cullin-3A1.4e-1986.79Show/hide
Query:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELY
        MS QKKRNFQIEAFKHRVVVDPKYA+KTW+ILE AIH+IYN +ASGLSFEELY
Subjt:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELY
Arabidopsis top hitse value%identityAlignment
AT1G26830.1 cullin 39.9e-2186.79Show/hide
Query:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELY
        MS QKKRNFQIEAFKHRVVVDPKYA+KTW+ILE AIH+IYN +ASGLSFEELY
Subjt:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELY
AT1G69670.1 cullin 3B4.7e-2394.34Show/hide
Query:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELY
        MS QKKRNFQIEAFK RVVVDPKYA+KTWKILEHAIHEIYNHNASGLSFEELY
Subjt:  MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGCCCAAAAGAAGAGGAATTTCCAGATAGAGGCCTTTAAACACCGGGTCGTGGTGGATCCGAAATATGCTGAGAAGACCTGGAAGATTTTGGAACATGCA
ATTCACGAGATTTACAATCATAACGCTAGCGGTCTTAGCTTCGAAGAGCTTTACAGTTTCATTACTTCCATTCCTCCAGATATCTGTACTCAAAATATTGCTCAT
GGAGCAAAGGCAAGTAAGCAGGAGAGATGGCAGGTTTCATCTGCTAGGAGTCTTGAAAGAGCGAAATGGACTAGATTTAATGAACCCCCTCTTTTGCTTATTACA
AATGGCTACAAAGGGAGCAATTCTCTTGGAAAGAGAAGGTTAGAAACTTTACTTGAGCTAAAATGCTTGCAGAAGAAGGGTGCCACCTCAGTTGGAAGTGTCTGT
TTAGAAGCAGAGTGGAAGTGTACATTGGATTATTGTTTTGGATCATTATTCAATGTAGTGCAATTAGCTTCAAAGCTTCTTGCTCAAATCAAGTTCTTTACATTT
GTCGGTGCAGTAAAATGGCTTCAACAATTTGTGATGGAAGCTACACTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGCCCAAAAGAAGAGGAATTTCCAGATAGAGGCCTTTAAACACCGGGTCGTGGTGGATCCGAAATATGCTGAGAAGACCTGGAAGATTTTGGAACATGCA
ATTCACGAGATTTACAATCATAACGCTAGCGGTCTTAGCTTCGAAGAGCTTTACAGTTTCATTACTTCCATTCCTCCAGATATCTGTACTCAAAATATTGCTCAT
GGAGCAAAGGCAAGTAAGCAGGAGAGATGGCAGGTTTCATCTGCTAGGAGTCTTGAAAGAGCGAAATGGACTAGATTTAATGAACCCCCTCTTTTGCTTATTACA
AATGGCTACAAAGGGAGCAATTCTCTTGGAAAGAGAAGGTTAGAAACTTTACTTGAGCTAAAATGCTTGCAGAAGAAGGGTGCCACCTCAGTTGGAAGTGTCTGT
TTAGAAGCAGAGTGGAAGTGTACATTGGATTATTGTTTTGGATCATTATTCAATGTAGTGCAATTAGCTTCAAAGCTTCTTGCTCAAATCAAGTTCTTTACATTT
GTCGGTGCAGTAAAATGGCTTCAACAATTTGTGATGGAAGCTACACTATAA
Protein sequenceShow/hide protein sequence
MSAQKKRNFQIEAFKHRVVVDPKYAEKTWKILEHAIHEIYNHNASGLSFEELYSFITSIPPDICTQNIAHGAKASKQERWQVSSARSLERAKWTRFNEPPLLLIT
NGYKGSNSLGKRRLETLLELKCLQKKGATSVGSVCLEAEWKCTLDYCFGSLFNVVQLASKLLAQIKFFTFVGAVKWLQQFVMEATL