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Chy4G082680 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G082680
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionF-box protein CPR30-like
Genome locationchrH04:22123877..22124766
RNA-Seq ExpressionChy4G082680
SyntenyChy4G082680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147500.2 putative F-box protein At3g21120 isoform X1 [Cucumis sativus]1.38e-6673.43Show/hide
Query:  LTQRFWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNFDVMDKCLGVFNGSIVLYPYPYKS----------------GVSW---TLTI
        LT RFWKPCFNMCHEGTCYWWG +E+G +TLETF MSDEVFGQIQVP +F+V+DKCLG+FNGSIVL+PY YK                 GVSW   TLTI
Subjt:  LTQRFWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNFDVMDKCLGVFNGSIVLYPYPYKS----------------GVSW---TLTI

Query:  GSVFGIDKAWLIVNSEVLFMEVNEGGLILYHDTIATHFVKSLV
        GSVFGIDKAWLIVNSE L MEVNEGGLILY+DTIAT FVKSLV
Subjt:  GSVFGIDKAWLIVNSEVLFMEVNEGGLILYHDTIATHFVKSLV

XP_004151361.3 F-box/kelch-repeat protein At3g23880-like isoform X1 [Cucumis sativus]2.39e-5859.39Show/hide
Query:  LTQRFWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNFDVM---DKCLGVFNGSIVLYPYPYKS----------------GVSWT--L
        L  RFWKPCFNMCHEGTCYWWG SE+G ETLETFDMSDEVFGQI +P++FDV+    KCLGVFNGSIV++PYPYK                 GVSW+  L
Subjt:  LTQRFWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNFDVM---DKCLGVFNGSIVLYPYPYKS----------------GVSWT--L

Query:  TIGSVFGIDKAWLIVNSEVLFMEVNEGGLILYHDT-----------IATHFVKSLVSVERGNNII
        TIGSVFGI+KAW IVNS+ LFME+N+ GLI Y+++            AT FVKSL+S+ R   I+
Subjt:  TIGSVFGIDKAWLIVNSEVLFMEVNEGGLILYHDT-----------IATHFVKSLVSVERGNNII

XP_008443617.1 PREDICTED: F-box protein CPR30-like [Cucumis melo]2.78e-5960.36Show/hide
Query:  LTQRFWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNFDVMD---KCLGVFNGSIVLYPYPYKS-----------------GVSWT--
        L  RFW P F MCHEGTCYWWG SE+ T TLETF+MSDEVFGQI +P++FDVM    KCLGVFNGSIVL+PYPYK                  GVSW+  
Subjt:  LTQRFWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNFDVMD---KCLGVFNGSIVLYPYPYKS-----------------GVSWT--

Query:  LTIGSVFGIDKAWLIVNSEVLFMEVNEGGLILYHDT-----------IATHFVKSLVSVERGNNIIYEF
        LTIGS+FGI+K WLIVNS+ LFMEVNEG LI Y+DT            AT F KSL+SV+ GNN+ YEF
Subjt:  LTIGSVFGIDKAWLIVNSEVLFMEVNEGGLILYHDT-----------IATHFVKSLVSVERGNNIIYEF

XP_011652864.1 F-box/kelch-repeat protein At3g06240-like [Cucumis sativus]7.08e-6163.25Show/hide
Query:  LTQRFWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNFDVMDKCLGVFNGSIVLYPYPYKS----------------GVSWT---LTI
        L  RFWKPCFNMCHEG C W G SE+GTE LETFD+SDEVFGQIQ+P +FDVMDKCLGVFNGSIVL+P PYK                  VSW+   LTI
Subjt:  LTQRFWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNFDVMDKCLGVFNGSIVLYPYPYKS----------------GVSWT---LTI

Query:  GSVFGIDKAWLIVNSEVLFMEVNEGGLILYHDT-----------IATHFVKSLVSVERGNNIIYEF
        GSVF I+KAW IVNS+ LF+EVN+G LILY+DT            AT FVKSLVSV+ GNNI YEF
Subjt:  GSVFGIDKAWLIVNSEVLFMEVNEGGLILYHDT-----------IATHFVKSLVSVERGNNIIYEF

XP_031737931.1 F-box protein CPR1-like isoform X2 [Cucumis sativus]1.29e-6142.86Show/hide
Query:  MTLNSEQNTTPILIGANTFFSGVLALTQ------------------------------------------------------------------------
        MT+NSEQNT PIL+GAN FFSGVLA TQ                                                                        
Subjt:  MTLNSEQNTTPILIGANTFFSGVLALTQ------------------------------------------------------------------------

Query:  ------------------RFWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNFDVM---DKCLGVFNGSIVLYPYPYKS---------
                          RFWKPCFNMCHEGTCYWWG SE+G ETLETFDMSDEVFGQI +P++FDV+    KCLGVFNGSIV++PYPYK          
Subjt:  ------------------RFWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNFDVM---DKCLGVFNGSIVLYPYPYKS---------

Query:  -------GVSWT--LTIGSVFGIDKAWLIVNSEVLFMEVNEGGLILYHDT-----------IATHFVKSLVSVERGNNII
               GVSW+  LTIGSVFGI+KAW IVNS+ LFME+N+ GLI Y+++            AT FVKSL+S+ R   I+
Subjt:  -------GVSWT--LTIGSVFGIDKAWLIVNSEVLFMEVNEGGLILYHDT-----------IATHFVKSLVSVERGNNII

TrEMBL top hitse value%identityAlignment
A0A1S3B974 F-box protein CPR30-like5.3e-4760.36Show/hide
Query:  LTQRFWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNFDVMD---KCLGVFNGSIVLYPYPYK-----------------SGVSWT--
        L  RFW P F MCHEGTCYWWG SE+ T TLETF+MSDEVFGQI +P++FDVM    KCLGVFNGSIVL+PYPYK                  GVSW+  
Subjt:  LTQRFWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNFDVMD---KCLGVFNGSIVLYPYPYK-----------------SGVSWT--

Query:  LTIGSVFGIDKAWLIVNSEVLFMEVNEGGLILYHDT-----------IATHFVKSLVSVERGNNIIYEF
        LTIGS+FGI+K WLIVNS+ LFMEVNEG LI Y+DT            AT F KSL+SV+ GNN+ YEF
Subjt:  LTIGSVFGIDKAWLIVNSEVLFMEVNEGGLILYHDT-----------IATHFVKSLVSVERGNNIIYEF

A0A5A7UEX1 F-box protein CPR30-like5.3e-4760.36Show/hide
Query:  LTQRFWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNFDVMD---KCLGVFNGSIVLYPYPYK-----------------SGVSWT--
        L  RFW P F MCHEGTCYWWG SE+ T TLETF+MSDEVFGQI +P++FDVM    KCLGVFNGSIVL+PYPYK                  GVSW+  
Subjt:  LTQRFWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNFDVMD---KCLGVFNGSIVLYPYPYK-----------------SGVSWT--

Query:  LTIGSVFGIDKAWLIVNSEVLFMEVNEGGLILYHDT-----------IATHFVKSLVSVERGNNIIYEF
        LTIGS+FGI+K WLIVNS+ LFMEVNEG LI Y+DT            AT F KSL+SV+ GNN+ YEF
Subjt:  LTIGSVFGIDKAWLIVNSEVLFMEVNEGGLILYHDT-----------IATHFVKSLVSVERGNNIIYEF

A0A5A7UHP3 F-box protein CPR30-like1.3e-2443.2Show/hide
Query:  FWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNFDVMD---KCLGVFNGSIVLYPYPYK----------------SGVSWT--LTIGS
        FW PCF + HEGT YWW  ++  TE + TFDMS+EVFGQI VP++F       + LGV +G IVL+ YP +                 GVSW+  LTIG 
Subjt:  FWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNFDVMD---KCLGVFNGSIVLYPYPYK----------------SGVSWT--LTIGS

Query:  VFGIDKAWLIVNSEVLFMEVNEGGLILYHDTI----------------ATHFVKSLVSVERGNNIIYEF
        V GI+K  L ++SE L ME N G LI+Y+                    T FVKSL+SV+ G++I YEF
Subjt:  VFGIDKAWLIVNSEVLFMEVNEGGLILYHDTI----------------ATHFVKSLVSVERGNNIIYEF

A0A6J1F5F2 F-box protein CPR30-like3.3e-2542.11Show/hide
Query:  FWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNF---DVMDKCLGVFNGSIVLYPYPYK----------------SGVSWT--LTIGS
        FW P F M HEGT YWW ++ +G E +++FDMS+EVFG+I +P++F   D M + +GV NGSIVL+ YP +                 GVSW+  LTIG 
Subjt:  FWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNF---DVMDKCLGVFNGSIVLYPYPYK----------------SGVSWT--LTIGS

Query:  VFGIDKAWLIVNSEVLFMEVNEGGLILYHD-------------------TIATHFVKSLVSVERGNNIIYE
        +FGI K  + V S  L ME  EG ++LY+                    T AT FV+ LVSV+ GNN+ YE
Subjt:  VFGIDKAWLIVNSEVLFMEVNEGGLILYHD-------------------TIATHFVKSLVSVERGNNIIYE

A0A6J1F6B1 F-box protein CPR30-like2.5e-2542.26Show/hide
Query:  FWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNFDVMD---KCLGVFNGSIVLYPYPYK----------------SGVSWT--LTIGS
        FW P F M HEGT YWW  + +G E +++FDMS+EVFGQI +P++F+      + LGV NGSIVL+ YP +                 GVSW+  L IG 
Subjt:  FWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNFDVMD---KCLGVFNGSIVLYPYPYK----------------SGVSWT--LTIGS

Query:  VFGIDKAWLIVNSEVLFMEVNEGGLILYHDTI----------------ATHFVKSLVSVERGNNIIYE
        + GI+K  + V+ + L ME NEG ++LY+                   AT FVKSLVSV+ GNN+ YE
Subjt:  VFGIDKAWLIVNSEVLFMEVNEGGLILYHDTI----------------ATHFVKSLVSVERGNNIIYE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTAAATTCAGAGCAAAACACTACTCCAATTCTCATCGGCGCAAACACGTTTTTCTCTGGTGTCCTCGCATTGACACAAAGATTCTGGAAGCCTTGTTTT
AATATGTGTCACGAAGGAACATGTTACTGGTGGGGGAGAAGTGAAAAAGGTACCGAGACTCTAGAGACATTCGACATGAGCGATGAGGTTTTTGGCCAAATTCAG
GTACCGAAGAATTTTGATGTGATGGATAAGTGTTTAGGGGTTTTTAATGGATCCATTGTCCTGTATCCTTATCCATATAAATCTGGGGTTTCATGGACATTGACA
ATTGGGTCTGTTTTCGGAATTGACAAGGCATGGTTGATTGTGAACTCGGAAGTACTTTTTATGGAGGTCAACGAAGGAGGATTGATTTTGTACCATGATACTATT
GCTACTCATTTTGTTAAGAGTTTGGTATCAGTTGAAAGAGGAAATAACATCATTTATGAATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCTAAATTCAGAGCAAAACACTACTCCAATTCTCATCGGCGCAAACACGTTTTTCTCTGGTGTCCTCGCATTGACACAAAGATTCTGGAAGCCTTGTTTT
AATATGTGTCACGAAGGAACATGTTACTGGTGGGGGAGAAGTGAAAAAGGTACCGAGACTCTAGAGACATTCGACATGAGCGATGAGGTTTTTGGCCAAATTCAG
GTACCGAAGAATTTTGATGTGATGGATAAGTGTTTAGGGGTTTTTAATGGATCCATTGTCCTGTATCCTTATCCATATAAATCTGGGGTTTCATGGACATTGACA
ATTGGGTCTGTTTTCGGAATTGACAAGGCATGGTTGATTGTGAACTCGGAAGTACTTTTTATGGAGGTCAACGAAGGAGGATTGATTTTGTACCATGATACTATT
GCTACTCATTTTGTTAAGAGTTTGGTATCAGTTGAAAGAGGAAATAACATCATTTATGAATTTTGA
Protein sequenceShow/hide protein sequence
MTLNSEQNTTPILIGANTFFSGVLALTQRFWKPCFNMCHEGTCYWWGRSEKGTETLETFDMSDEVFGQIQVPKNFDVMDKCLGVFNGSIVLYPYPYKSGVSWTLT
IGSVFGIDKAWLIVNSEVLFMEVNEGGLILYHDTIATHFVKSLVSVERGNNIIYEF