| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0053863.1 DNA-directed RNA polymerase V subunit 5A [Cucumis melo var. makuwa] | 1.17e-145 | 96.82 | Show/hide |
Query: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDI+ SLQQFR+ FGQ+PDVDRLKL AAHHSDPSKRVLVVFCGTGAV
Subjt: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAH
GLEKGQVVKVTYDGDMT AH
Subjt: GLEKGQVVKVTYDGDMTRAH
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| XP_004136650.1 DNA-directed RNA polymerase V subunit 5A [Cucumis sativus] | 2.22e-150 | 98.64 | Show/hide |
Query: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSP+I+FSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Subjt: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAHV
GLEKGQVVKVTYDGDMTRAH+
Subjt: GLEKGQVVKVTYDGDMTRAHV
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| XP_008443287.1 PREDICTED: DNA-directed RNA polymerase V subunit 5A [Cucumis melo] | 1.01e-146 | 96.83 | Show/hide |
Query: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDI+ SLQQFR+ FGQ+PDVDRLKL AAHHSDPSKRVLVVFCGTGAV
Subjt: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAHV
GLEKGQVVKVTYDGDMT AHV
Subjt: GLEKGQVVKVTYDGDMTRAHV
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| XP_023539155.1 DNA-directed RNA polymerase V subunit 5A [Cucurbita pepo subsp. pepo] | 1.10e-134 | 88.24 | Show/hide |
Query: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
MEEDGF EPN VE GTCLSSYIDDGTTESHRY+LSRRTV+EML+DRGYTIN DI+ +LQQFRE +GQFPDVDRLKLSAAH +DPSKR+LV+FCGTGAV
Subjt: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
KV+AIRNIAGQI NK++LHGLILIVQNQITNQAMKAVE+FSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQLPRMLRTDAIARYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAHV
GLEKGQ+VKVTYDGDMTR+HV
Subjt: GLEKGQVVKVTYDGDMTRAHV
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| XP_038903402.1 DNA-directed RNA polymerase V subunit 5A [Benincasa hispida] | 4.90e-138 | 90.95 | Show/hide |
Query: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
MEEDGFE EPN VEFGTCLSSYID+GTTESHRYFLSRRTV+EML+DRGYT+NS DI+ SLQQFRE +GQ PDVDRLKLSA H SDPSKRVLV+FCGTGAV
Subjt: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVL+EEEKQKLL+QYSIEEKQLPRMLR DA+ARYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAHV
GLEKGQVVKVTYDGDMTR+HV
Subjt: GLEKGQVVKVTYDGDMTRAHV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LCG9 Uncharacterized protein | 3.9e-118 | 98.64 | Show/hide |
Query: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSP+I+FSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Subjt: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAHV
GLEKGQVVKVTYDGDMTRAH+
Subjt: GLEKGQVVKVTYDGDMTRAHV
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| A0A1S3B7M5 DNA-directed RNA polymerase V subunit 5A | 2.3e-115 | 96.83 | Show/hide |
Query: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDI+ SLQQFR+ FGQ+PDVDRLKL AAHHSDPSKRVLVVFCGTGAV
Subjt: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAHV
GLEKGQVVKVTYDGDMT AHV
Subjt: GLEKGQVVKVTYDGDMTRAHV
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| A0A5D3DQJ3 DNA-directed RNA polymerase V subunit 5A | 6.8e-115 | 96.82 | Show/hide |
Query: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDI+ SLQQFR+ FGQ+PDVDRLKL AAHHSDPSKRVLVVFCGTGAV
Subjt: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAH
GLEKGQVVKVTYDGDMT AH
Subjt: GLEKGQVVKVTYDGDMTRAH
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| A0A6J1I260 DNA-directed RNA polymerase V subunit 5A isoform X1 | 1.7e-105 | 87.78 | Show/hide |
Query: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
MEEDGF EPN VE GTCLSSYIDDGTTESHRY+LSRRTV+EML+DRGYTIN DI+ +LQQFRE +GQFPDVDRLKLSAAH +DPSKR+LV+FCGTGAV
Subjt: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
KV+AIRNIAGQI NK++LHGLILIVQNQITNQAMKAVE+FSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQLPRMLRTDAIARYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAHV
LEKGQ+VKVTYDGDMTR+HV
Subjt: GLEKGQVVKVTYDGDMTRAHV
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| A0A6J1I733 DNA-directed RNA polymerase V subunit 5A isoform X2 | 1.7e-105 | 87.78 | Show/hide |
Query: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
MEEDGF EPN VE GTCLSSYIDDGTTESHRY+LSRRTV+EML+DRGYTIN DI+ +LQQFRE +GQFPDVDRLKLSAAH +DPSKR+LV+FCGTGAV
Subjt: MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
KV+AIRNIAGQI NK++LHGLILIVQNQITNQAMKAVE+FSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLL+QYSIEEKQLPRMLRTDAIARYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTYDGDMTRAHV
LEKGQ+VKVTYDGDMTR+HV
Subjt: GLEKGQVVKVTYDGDMTRAHV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A8XGH1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 5.2e-27 | 34.72 | Show/hide |
Query: DGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDR-----LKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLH
D E++R + R+TV++M+ DRGY + +++ L+ F+ETFG P + L + AH+ DP+ ++ V F + + I+ I Q+ + ++
Subjt: DGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDR-----LKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLH
Query: GLILIVQNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKV
I++VQ +T A +++ + + +E F +L+VNIT+H L P H V+T EEK +LL +Y +++ QLPR+ + D +ARY+GL +GQVVK+
Subjt: GLILIVQNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKV
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| Q9FJL8 DNA-directed RNA polymerase subunit 5-like protein 1 | 1.1e-26 | 35.51 | Show/hide |
Query: IDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQF---PDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLH
+ D E R F RRTV++ML+DRGYTI D+N ++F + F + + + L +SA +P+ ++ V + V V I+ D +H
Subjt: IDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQF---PDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLH
Query: GLILIVQNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
I++V IT A AV + +E+F+ +L+ NIT+H L + VL ++ K+KLL Y++++ QLPR+L TD +ARYYGL++GQVVK+
Subjt: GLILIVQNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
Query: RAHVCSADFYDYGF
R+ S D+Y Y F
Subjt: RAHVCSADFYDYGF
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| Q9M1H8 DNA-directed RNA polymerase V subunit 5C | 5.9e-47 | 44.34 | Show/hide |
Query: EEDGFEAEPNPVEFGT-CLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
EE E + + GT C+S D G ES R++L+R T EML+DRGY +N +++ +L +FR FG+ P+++RL++ SDP K++LVVF GT +
Subjt: EEDGFEAEPNPVEFGT-CLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
V ++R + QI+N LH +IL++Q+++ + A KA+ F F VE F I DLLVNITKH +P ++L +EEK++LL+++++E+KQLP + D+ RYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTY
GL+K QVVK+TY
Subjt: GLEKGQVVKVTY
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| Q9M1J2 DNA-directed RNA polymerase V subunit 5A | 9.0e-72 | 63.24 | Show/hide |
Query: CLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDS
CLS Y+D + ESHRY+L+RR ++ML+DRGY ++ DIN SL FR +G+ PDVDRL++SA H SD +K+V +VF GT VKVNAIR++ I ++++
Subjt: CLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDS
Query: LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
+ GLIL++QN +TNQA+KA+ELFSFKVEIFQITDLLVNITKH+LKP HQVL +EEK LLK++SIEEKQLPR+ + DAI RYYGLEKGQVVKV Y G++T
Subjt: LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
Query: RAHV
+HV
Subjt: RAHV
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| Q9ZVB9 DNA-directed RNA polymerases IV and V subunit 5B | 1.9e-66 | 59.8 | Show/hide |
Query: IDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLI
I + E H+Y+L+RRT +EML+DRGY ++ DIN SLQQFR +G+ PDVD L++SA H D SK++ VVFCGTG VKVNA+R IA + +++++ GLI
Subjt: IDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLI
Query: LIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRAHV
L++Q+ ITNQA+KAVELFSFKVE+F+ITDLLVN++KH L+P HQVL ++EK+ LLK++SIEEKQLPR+ D I RYYGLE GQV+KVTY +++ +HV
Subjt: LIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRAHV
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 1.4e-67 | 59.8 | Show/hide |
Query: IDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLI
I + E H+Y+L+RRT +EML+DRGY ++ DIN SLQQFR +G+ PDVD L++SA H D SK++ VVFCGTG VKVNA+R IA + +++++ GLI
Subjt: IDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLI
Query: LIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRAHV
L++Q+ ITNQA+KAVELFSFKVE+F+ITDLLVN++KH L+P HQVL ++EK+ LLK++SIEEKQLPR+ D I RYYGLE GQV+KVTY +++ +HV
Subjt: LIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTRAHV
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| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 9.0e-27 | 36.96 | Show/hide |
Query: ESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLILIVQNQ
E R + ++T+++ML+DRGY I ++ + QQF G + L A +D S ++ + F V V ++ ++ +++ IL+VQ
Subjt: ESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLILIVQNQ
Query: ITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKV
+T A + S F +E+FQ ++LVNI +H L P HQVLT EEK+ LL++Y+++E QLPR+ TD IARY+GL++GQVVK+
Subjt: ITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKV
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| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 4.2e-48 | 44.34 | Show/hide |
Query: EEDGFEAEPNPVEFGT-CLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
EE E + + GT C+S D G ES R++L+R T EML+DRGY +N +++ +L +FR FG+ P+++RL++ SDP K++LVVF GT +
Subjt: EEDGFEAEPNPVEFGT-CLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAV
Query: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
V ++R + QI+N LH +IL++Q+++ + A KA+ F F VE F I DLLVNITKH +P ++L +EEK++LL+++++E+KQLP + D+ RYY
Subjt: KVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYY
Query: GLEKGQVVKVTY
GL+K QVVK+TY
Subjt: GLEKGQVVKVTY
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| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 6.4e-73 | 63.24 | Show/hide |
Query: CLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDS
CLS Y+D + ESHRY+L+RR ++ML+DRGY ++ DIN SL FR +G+ PDVDRL++SA H SD +K+V +VF GT VKVNAIR++ I ++++
Subjt: CLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQFPDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDS
Query: LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
+ GLIL++QN +TNQA+KA+ELFSFKVEIFQITDLLVNITKH+LKP HQVL +EEK LLK++SIEEKQLPR+ + DAI RYYGLEKGQVVKV Y G++T
Subjt: LHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
Query: RAHV
+HV
Subjt: RAHV
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| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 8.2e-28 | 35.51 | Show/hide |
Query: IDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQF---PDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLH
+ D E R F RRTV++ML+DRGYTI D+N ++F + F + + + L +SA +P+ ++ V + V V I+ D +H
Subjt: IDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDINFSLQQFRETFGQF---PDVDRLKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLH
Query: GLILIVQNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
I++V IT A AV + +E+F+ +L+ NIT+H L + VL ++ K+KLL Y++++ QLPR+L TD +ARYYGL++GQVVK+
Subjt: GLILIVQNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
Query: RAHVCSADFYDYGF
R+ S D+Y Y F
Subjt: RAHVCSADFYDYGF
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