; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy4G084030 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G084030
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionTFIIS N-terminal domain-containing protein
Genome locationchrH04:23226976..23229720
RNA-Seq ExpressionChy4G084030
SyntenyChy4G084030
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003617 - Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
IPR017923 - Transcription factor IIS, N-terminal
IPR035441 - TFIIS/LEDGF domain superfamily
IPR044805 - Mediator of RNA polymerase II transcription subunit 26a/b-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136624.1 probable mediator of RNA polymerase II transcription subunit 26b [Cucumis sativus]0.098.89Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDF RDGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
        HLARVLIMEWKEMVD+WVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
Subjt:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT

Query:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
        SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNS LLR QKLS+EQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
Subjt:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR
        KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR

XP_008443218.1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Cucumis melo]2.79e-31298.01Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFA DGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESD VLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
        HLARVLIMEWK+MVDVWVQATAAVQGAEVTPDSK+KSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
Subjt:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT

Query:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
        SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNS LLR QKLS+EQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
Subjt:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR
        KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNR+W NGRR
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR

XP_023539160.1 probable mediator of RNA polymerase II transcription subunit 26b [Cucurbita pepo subsp. pepo]3.36e-25984.73Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK
        M+AKS SLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGD+DG   ETGFKSD A DG  FE GGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
        ESKVYSSRDD GEMN N+VSN+SFGEAEALTDEIEQES+IVGEVLRIKEILNNFE+ESD VLFESLRRLELMALSVD LQATEIGKAVN LRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
        HL R LI EWKEMVD+WV+ATAAV G+EVTPDSK+  A+ +EEDDYE+ GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSG+FVK  +N RKT
Subjt:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT

Query:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
        SNG+QNP RC QQTTREVNV++K+NK+QMKEQVVKPN KP SN NS L RPQK SS QKDNHEK QRK+EKPTIPKR+ QD FKCSDEVAVQVKLEATKR
Subjt:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR
        KLQESYQQAENAKKQRTIQVMELHD+PKQG+GHRN HLKSGG NR+W NGRR
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR

XP_038904902.1 probable mediator of RNA polymerase II transcription subunit 26b isoform X1 [Benincasa hispida]9.72e-29794.48Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFA DGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESD VLFESLRRLELMALSVDTLQATEIGKAVN LRKHGSK IR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEE-GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HLARVLIMEWKEMVD WV+ATAAVQGAEVTPDSKNKSA+VKEED+YEEE GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
Subjt:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEE-GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATK
        TSNGNQNP R NQQT  EVNVL+KEN TQMKEQVVKPN +PSSNTNS LLRPQKLS+EQKDNHEKFQRKL+KPTIPKRNQQ N+KCSDEVAVQVKLEATK
Subjt:  TSNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATK

Query:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR
        RKLQESYQQAENAKKQRTIQVMELHDLPKQG+GHRNPHLKSGG+NRNWANGRR
Subjt:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR

XP_038904903.1 probable mediator of RNA polymerase II transcription subunit 26b isoform X2 [Benincasa hispida]2.88e-29394.04Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFA DGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESD VLFESLRRLELMALSVDTLQATEIGKAVN LRKHGSK IR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEE-GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
        HLARVLIMEWKEMVD WV+ATAAVQ  EVTPDSKNKSA+VKEED+YEEE GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
Subjt:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEE-GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK

Query:  TSNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATK
        TSNGNQNP R NQQT  EVNVL+KEN TQMKEQVVKPN +PSSNTNS LLRPQKLS+EQKDNHEKFQRKL+KPTIPKRNQQ N+KCSDEVAVQVKLEATK
Subjt:  TSNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATK

Query:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR
        RKLQESYQQAENAKKQRTIQVMELHDLPKQG+GHRNPHLKSGG+NRNWANGRR
Subjt:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR

TrEMBL top hitse value%identityAlignment
A0A0A0LBK9 TFIIS N-terminal domain-containing protein5.6e-24898.89Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDF RDGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
        HLARVLIMEWKEMVD+WVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
Subjt:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT

Query:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
        SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNS LLR QKLS+EQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
Subjt:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR
        KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR

A0A1S3B7K4 probable mediator of RNA polymerase II transcription subunit 26b4.5e-24598.01Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFA DGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESD VLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
        HLARVLIMEWK+MVDVWVQATAAVQGAEVTPDSK+KSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
Subjt:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT

Query:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
        SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNS LLR QKLS+EQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
Subjt:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR
        KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNR+W NGRR
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR

A0A5A7UDQ2 Putative mediator of RNA polymerase II transcription subunit 26b4.5e-24598.01Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFA DGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESD VLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
        HLARVLIMEWK+MVDVWVQATAAVQGAEVTPDSK+KSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
Subjt:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT

Query:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
        SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNS LLR QKLS+EQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
Subjt:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR
        KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNR+W NGRR
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR

A0A6J1FCK1 probable mediator of RNA polymerase II transcription subunit 26b1.2e-20284.07Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK
        M+AKSGSLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGD+   DGETGFKSD A DG  FE GGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
        ESKVYSSRDD GEMN N+VSN+SFGEAEALTDEIEQES+IVGEVLRIKEILNNFE+ESD VLFESLRRLELMALSVD LQATEIGKAVN LRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
        HL R LI EWKEMVD+WV+ATAAV G+EVTPDSK+   + +EEDDY E+GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSG+FVK R+N RKT
Subjt:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT

Query:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
        S+G+QNP RC QQTTREVNV++K+NK+QMKEQVVKP NKP SN NS   R QK S+ QKDNHEK QRK+EKPTIPKR+ QD FKCSDEVAVQVKLEATKR
Subjt:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR
        KLQESYQQAENAKKQRTIQVMELHD+PKQG+GHRN HLKSGG NR+W NGRR
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR

A0A6J1I7W1 probable mediator of RNA polymerase II transcription subunit 26b1.2e-20283.84Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK
        M+AKSGSLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGD+   D ETGFKSD A DG  FE GGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
        ESKVYSSRDD GEMN N+VSN+SFGEAEALTDEIEQES+IVGEVLRIKEILNNFE+ESD VLFESLRRLELMALSVD LQATEIGKAVN LRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
        HL R LI EWKEMVD+WV+ATAAV G+EVTPDSK+  A+ +EEDDY E+GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSG+FVK R+N RKT
Subjt:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT

Query:  SNGNQNPTRCNQQTTREVNVL------SKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVK
        SNG+QNP RC QQTTREVNV+      SK+NK+QMKEQVVKP NKP SN NS L RPQK S+ QKDNHEK QRK+EKPTIPKR+ QD FKCSDEVAVQVK
Subjt:  SNGNQNPTRCNQQTTREVNVL------SKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVK

Query:  LEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR
        LEATKRKLQESYQQAENAKKQRTIQVMELHD+PKQG+GHRN HLKSGG NR+W NGRR
Subjt:  LEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR

SwissProt top hitse value%identityAlignment
F4J4Y5 Probable mediator of RNA polymerase II transcription subunit 26a1.5e-6442.36Show/hide
Query:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKV
        S SLD+WR YFR  +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD +EL++AGD            + A +      GG +    
Subjt:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKV

Query:  YSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLAR
                            G++   T E E+ S  V EV+RI++IL+N +DE D VL ESLR+LE M++SVD L+ TEIGKAVN LR+H S +I  LA+
Subjt:  YSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLAR

Query:  VLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGN
         L  EWK +VD W+     + G E TP+S N S         EEE  PSPP D    +  +P   ELSQ  D +D DGNPR+S   V++++  +  S+  
Subjt:  VLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGN

Query:  QNPTRCNQQTTREVNVLSK---ENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRN----QQDNFKCSDEVAVQVKLEA
        + P     + T + NV+ +   + +T+ +E  V+P  K S+    E  R  K S EQ  +    QRK    T  KR     QQD  K  D      K E 
Subjt:  QNPTRCNQQTTREVNVLSK---ENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRN----QQDNFKCSDEVAVQVKLEA

Query:  TKRKLQESYQQAENAKKQRTIQVMELHDLPKQ
         KRKLQESY Q ENAK+QRTIQV+E   +PKQ
Subjt:  TKRKLQESYQQAENAKKQRTIQVMELHDLPKQ

F4KFC7 Probable mediator of RNA polymerase II transcription subunit 26c1.4e-2226.86Show/hide
Query:  LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD------RVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK
        LD +R+   NA  D++  ID AILVA+ D  +E + RRD I E+L++  +  +C  CD        E A+    +G   E   + D             +
Subjt:  LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD------RVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
        E    ++ +++ E + N   +  F     L D+ EQ+S     ++ IKE L +  D S+  L E L+ LE M ++   LQ T+IG+ VN +RKH S  +R
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
         LA+ L+ +WKE VD WV+     Q  ++ P S      + +ED   ++ L +    +   F   P                                  
Subjt:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT

Query:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
                                         V  N   SS+ NS +  P++          +      KP+ P  +QQ   +  D+   +V  +  ++
Subjt:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGF
        +LQ++Y+QAENAKKQRTIQVM++HD+PK          K GGF
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGF

Q14241 Elongin-A5.1e-0433.72Show/hide
Query:  LFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYE
        L + L++L  + ++VD L  T +GK VN LRKH  + +   AR L+ +WK++V V   A    Q  E +   K    A+++E++ E
Subjt:  LFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYE

Q8CB77 Elongin-A3.9e-0432.29Show/hide
Query:  LFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDD----YEEEGLPS
        L + L++L ++ ++VD L  T +GK VN  RKH  +++ + AR L+ +WK++V V   + A  Q  E     K    A++ E++    Y+E   PS
Subjt:  LFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDD----YEEEGLPS

Q9FHK9 Probable mediator of RNA polymerase II transcription subunit 26b1.6e-9049.57Show/hide
Query:  SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFE-AGGSKES
        SGSLDSWR YF R  +SDIFGIID+AI+VAA+DCP +F+ RRD+IAE LFSCR+ RC+GCD +EL+V GD + + G TG          ++E AGGSKES
Subjt:  SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFE-AGGSKES

Query:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHL
        K  SSR D    N   VSN++F EAEAL+DEIE+ S +  EV RIKEIL N EDE + VL +SLR L+LM+L+VD L++TEIGKAVN LRKH S +IR L
Subjt:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHL

Query:  ARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSN
        A+ LI EWKE+VD WV  T  + GAE TP+S N S         EEE  PS P D    FT +P   E+S FFD +D DGNPRNS +   +R + R+  N
Subjt:  ARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSN

Query:  GNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNN-KPSSNTNSE-LLRPQKLSSEQKDNHEKFQ-RKLEKPTIPKR------------NQQDNFKCSD
          +                 K   TQM+ Q     + KPSS T+ +   RP K S+EQ+  +E     K EKP I ++             QQ+  K  D
Subjt:  GNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNN-KPSSNTNSE-LLRPQKLSSEQKDNHEKFQ-RKLEKPTIPKR------------NQQDNFKCSD

Query:  EVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGF-NRNWANGRR
              K E  KRKLQESYQ  ENAKKQRTIQV+E+  +PKQG   + P LK  G  NRNWANGR+
Subjt:  EVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGF-NRNWANGRR

Arabidopsis top hitse value%identityAlignment
AT3G10820.1 Transcription elongation factor (TFIIS) family protein3.9e-5244.98Show/hide
Query:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKV
        S SLD+WR YFR  +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD +EL++AGD            + A +      GG +    
Subjt:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKV

Query:  YSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLAR
                            G++   T E E+ S  V EV+RI++IL+N +DE D VL ESLR+LE M++SVD L+ TEIGKAVN LR+H S +I  LA+
Subjt:  YSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLAR

Query:  VLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ
         L  EWK +VD W+     + G E TP+S N S         EEE  PSPP D    +  +P   ELSQ
Subjt:  VLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ

AT3G10820.2 Transcription elongation factor (TFIIS) family protein1.1e-6542.36Show/hide
Query:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKV
        S SLD+WR YFR  +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD +EL++AGD            + A +      GG +    
Subjt:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKV

Query:  YSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLAR
                            G++   T E E+ S  V EV+RI++IL+N +DE D VL ESLR+LE M++SVD L+ TEIGKAVN LR+H S +I  LA+
Subjt:  YSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLAR

Query:  VLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGN
         L  EWK +VD W+     + G E TP+S N S         EEE  PSPP D    +  +P   ELSQ  D +D DGNPR+S   V++++  +  S+  
Subjt:  VLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGN

Query:  QNPTRCNQQTTREVNVLSK---ENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRN----QQDNFKCSDEVAVQVKLEA
        + P     + T + NV+ +   + +T+ +E  V+P  K S+    E  R  K S EQ  +    QRK    T  KR     QQD  K  D      K E 
Subjt:  QNPTRCNQQTTREVNVLSK---ENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRN----QQDNFKCSDEVAVQVKLEA

Query:  TKRKLQESYQQAENAKKQRTIQVMELHDLPKQ
         KRKLQESY Q ENAK+QRTIQV+E   +PKQ
Subjt:  TKRKLQESYQQAENAKKQRTIQVMELHDLPKQ

AT3G48060.1 BAH domain ;TFIIS helical bundle-like domain8.9e-0437.1Show/hide
Query:  DPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQA
        D  L   LR L+ + ++++ LQ   IGK+VN LR H +  I   AR L+  WK+ V+  + A
Subjt:  DPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQA

AT5G05140.1 Transcription elongation factor (TFIIS) family protein1.1e-9149.57Show/hide
Query:  SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFE-AGGSKES
        SGSLDSWR YF R  +SDIFGIID+AI+VAA+DCP +F+ RRD+IAE LFSCR+ RC+GCD +EL+V GD + + G TG          ++E AGGSKES
Subjt:  SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFE-AGGSKES

Query:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHL
        K  SSR D    N   VSN++F EAEAL+DEIE+ S +  EV RIKEIL N EDE + VL +SLR L+LM+L+VD L++TEIGKAVN LRKH S +IR L
Subjt:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHL

Query:  ARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSN
        A+ LI EWKE+VD WV  T  + GAE TP+S N S         EEE  PS P D    FT +P   E+S FFD +D DGNPRNS +   +R + R+  N
Subjt:  ARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSN

Query:  GNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNN-KPSSNTNSE-LLRPQKLSSEQKDNHEKFQ-RKLEKPTIPKR------------NQQDNFKCSD
          +                 K   TQM+ Q     + KPSS T+ +   RP K S+EQ+  +E     K EKP I ++             QQ+  K  D
Subjt:  GNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNN-KPSSNTNSE-LLRPQKLSSEQKDNHEKFQ-RKLEKPTIPKR------------NQQDNFKCSD

Query:  EVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGF-NRNWANGRR
              K E  KRKLQESYQ  ENAKKQRTIQV+E+  +PKQG   + P LK  G  NRNWANGR+
Subjt:  EVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGF-NRNWANGRR

AT5G09850.1 Transcription elongation factor (TFIIS) family protein1.0e-2326.86Show/hide
Query:  LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD------RVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK
        LD +R+   NA  D++  ID AILVA+ D  +E + RRD I E+L++  +  +C  CD        E A+    +G   E   + D             +
Subjt:  LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD------RVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
        E    ++ +++ E + N   +  F     L D+ EQ+S     ++ IKE L +  D S+  L E L+ LE M ++   LQ T+IG+ VN +RKH S  +R
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR

Query:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
         LA+ L+ +WKE VD WV+     Q  ++ P S      + +ED   ++ L +    +   F   P                                  
Subjt:  HLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT

Query:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
                                         V  N   SS+ NS +  P++          +      KP+ P  +QQ   +  D+   +V  +  ++
Subjt:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGF
        +LQ++Y+QAENAKKQRTIQVM++HD+PK          K GGF
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCAAGTCTGGGTCGCTTGATTCCTGGAGGAATTACTTCCGGAATGCGAATTCGGATATTTTTGGTATAATCGATTACGCAATTTTGGTGGCGGCTTCC
GATTGTCCTAAGGAGTTCAGGTTGAGGAGAGATCGAATTGCAGAGCAGTTGTTCTCTTGCCGATTGACTCGTTGCTTGGGCTGTGACCGAGTGGAGCTGGCGGTG
GCCGGAGACATCGACGGCGATGACGGCGAAACGGGTTTCAAGAGCGATTTCGCCAGAGATGGGTGTGAGTTTGAGGCTGGTGGGAGCAAAGAGAGCAAGGTTTAT
AGTAGTAGAGATGATATAGGGGAGATGAATTGCAACCGGGTTAGTAATTTTAGCTTTGGTGAAGCTGAAGCATTGACTGATGAAATTGAGCAAGAATCTCAGATT
GTAGGAGAGGTTTTGAGGATCAAAGAGATTCTTAATAATTTTGAAGATGAGTCTGATCCGGTGTTGTTTGAATCACTTAGAAGACTTGAATTGATGGCTCTATCA
GTTGATACTTTGCAGGCAACTGAGATTGGCAAAGCTGTTAATTGTCTTCGAAAGCATGGATCAAAGCGCATCCGCCATCTGGCTCGAGTTCTTATCATGGAGTGG
AAAGAAATGGTGGACGTGTGGGTACAAGCTACAGCTGCTGTTCAAGGTGCAGAGGTCACACCGGATTCCAAAAACAAGTCTGCTGCGGTGAAAGAAGAAGATGAT
TATGAAGAAGAAGGCCTTCCCTCTCCTCCTTTAGATGAAGCTGCATTTTTTACAACTCAGCCCACATCGATGGAGCTCTCACAATTCTTTGATGGCATGGACGAT
GATGGAAATCCTCGAAATAGTGGGGACTTCGTCAAGAACCGCAATAATGTGAGAAAAACTTCAAATGGCAATCAAAACCCTACAAGGTGTAACCAACAAACCACT
CGAGAGGTTAATGTGCTTTCTAAGGAAAATAAGACTCAAATGAAGGAACAAGTTGTGAAGCCAAATAATAAGCCATCCTCAAACACAAATTCTGAGCTTTTGAGG
CCACAGAAGCTAAGCTCAGAACAGAAGGACAACCATGAGAAGTTCCAGCGCAAATTGGAAAAACCTACAATCCCAAAGAGGAATCAACAAGATAACTTCAAGTGC
TCGGATGAGGTCGCGGTTCAAGTGAAACTAGAAGCTACAAAAAGGAAACTCCAAGAGAGTTACCAACAAGCTGAAAACGCCAAGAAGCAGCGTACGATACAGGTT
ATGGAATTACACGATCTTCCCAAGCAAGGAATCGGCCACAGAAATCCACACCTAAAATCTGGAGGCTTCAACCGGAATTGGGCAAATGGACGGCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCAAGTCTGGGTCGCTTGATTCCTGGAGGAATTACTTCCGGAATGCGAATTCGGATATTTTTGGTATAATCGATTACGCAATTTTGGTGGCGGCTTCC
GATTGTCCTAAGGAGTTCAGGTTGAGGAGAGATCGAATTGCAGAGCAGTTGTTCTCTTGCCGATTGACTCGTTGCTTGGGCTGTGACCGAGTGGAGCTGGCGGTG
GCCGGAGACATCGACGGCGATGACGGCGAAACGGGTTTCAAGAGCGATTTCGCCAGAGATGGGTGTGAGTTTGAGGCTGGTGGGAGCAAAGAGAGCAAGGTTTAT
AGTAGTAGAGATGATATAGGGGAGATGAATTGCAACCGGGTTAGTAATTTTAGCTTTGGTGAAGCTGAAGCATTGACTGATGAAATTGAGCAAGAATCTCAGATT
GTAGGAGAGGTTTTGAGGATCAAAGAGATTCTTAATAATTTTGAAGATGAGTCTGATCCGGTGTTGTTTGAATCACTTAGAAGACTTGAATTGATGGCTCTATCA
GTTGATACTTTGCAGGCAACTGAGATTGGCAAAGCTGTTAATTGTCTTCGAAAGCATGGATCAAAGCGCATCCGCCATCTGGCTCGAGTTCTTATCATGGAGTGG
AAAGAAATGGTGGACGTGTGGGTACAAGCTACAGCTGCTGTTCAAGGTGCAGAGGTCACACCGGATTCCAAAAACAAGTCTGCTGCGGTGAAAGAAGAAGATGAT
TATGAAGAAGAAGGCCTTCCCTCTCCTCCTTTAGATGAAGCTGCATTTTTTACAACTCAGCCCACATCGATGGAGCTCTCACAATTCTTTGATGGCATGGACGAT
GATGGAAATCCTCGAAATAGTGGGGACTTCGTCAAGAACCGCAATAATGTGAGAAAAACTTCAAATGGCAATCAAAACCCTACAAGGTGTAACCAACAAACCACT
CGAGAGGTTAATGTGCTTTCTAAGGAAAATAAGACTCAAATGAAGGAACAAGTTGTGAAGCCAAATAATAAGCCATCCTCAAACACAAATTCTGAGCTTTTGAGG
CCACAGAAGCTAAGCTCAGAACAGAAGGACAACCATGAGAAGTTCCAGCGCAAATTGGAAAAACCTACAATCCCAAAGAGGAATCAACAAGATAACTTCAAGTGC
TCGGATGAGGTCGCGGTTCAAGTGAAACTAGAAGCTACAAAAAGGAAACTCCAAGAGAGTTACCAACAAGCTGAAAACGCCAAGAAGCAGCGTACGATACAGGTT
ATGGAATTACACGATCTTCCCAAGCAAGGAATCGGCCACAGAAATCCACACCTAAAATCTGGAGGCTTCAACCGGAATTGGGCAAATGGACGGCGTTAG
Protein sequenceShow/hide protein sequence
MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKVY
SSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVLIMEW
KEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGNQNPTRCNQQTT
REVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV
MELHDLPKQGIGHRNPHLKSGGFNRNWANGRR