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Chy4G085190 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G085190
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Description60S ribosomal protein L21
Genome locationchrH04:24283054..24283290
RNA-Seq ExpressionChy4G085190
SyntenyChy4G085190
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AQK65186.1 60S ribosomal protein L21-1 [Zea mays]1.67e-5196.2Show/hide
Query:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
        MPAGHGLRSRTRDLFARPFRKKGYI LTTYLRTYKIGDYVD+KVNGAVHKGMPHKFYHGRTG+VWNVTKRAIGVEINKQ
Subjt:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ

KAG8088638.1 hypothetical protein GUJ93_ZPchr0010g8513 [Zizania palustris]1.81e-5194.94Show/hide
Query:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
        MPAGHGLRSRTRDLFARPFRKKGYI LTTYLRTYK+GDYVD+KVNGAVHKGMPHKFYHGRTG+VWNVTKRAIGVEINKQ
Subjt:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ

XP_004140433.3 60S ribosomal protein L21-1 [Cucumis sativus]5.08e-52100Show/hide
Query:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
        MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
Subjt:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ

XP_022151455.1 60S ribosomal protein L21-2 [Momordica charantia]2.07e-5198.73Show/hide
Query:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
        MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTG+VWNVTKRAIGVEINKQ
Subjt:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ

XP_031739289.1 60S ribosomal protein L21-1 [Cucumis sativus]5.08e-52100Show/hide
Query:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
        MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
Subjt:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ

TrEMBL top hitse value%identityAlignment
A0A0A0LEZ0 Uncharacterized protein3.4e-39100Show/hide
Query:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
        MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
Subjt:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ

A0A1S3B7V0 60S ribosomal protein L21-19.8e-3998.73Show/hide
Query:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
        MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTG+VWNVTKRAIGVEINKQ
Subjt:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ

A0A5D3DP20 60S ribosomal protein L21-19.8e-3998.73Show/hide
Query:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
        MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTG+VWNVTKRAIGVEINKQ
Subjt:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ

A0A6J1DB74 60S ribosomal protein L21-29.8e-3998.73Show/hide
Query:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
        MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTG+VWNVTKRAIGVEINKQ
Subjt:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ

A0A6J1KU90 60S ribosomal protein L21-2-like1.3e-3897.47Show/hide
Query:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
        MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGA+HKGMPHKFYHGRTG+VWNVTKRAIGVEINKQ
Subjt:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ

SwissProt top hitse value%identityAlignment
O82574 60S ribosomal protein L212.0e-2567.09Show/hide
Query:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
        MP  +G R+RTR LFAR F+  G + L+TYL  +KIG+YVD+  N AVHKGMP K+YHGRTG VWNVTKRAIGVEINK+
Subjt:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ

Q43291 60S ribosomal protein L21-12.1e-3884.81Show/hide
Query:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
        MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGRTG++WNVTKRA+GVE+NKQ
Subjt:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ

Q54X53 60S ribosomal protein L216.3e-2768.35Show/hide
Query:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
        MP   GLR+RTR LF+R FR  G +  TT+LRT+++GDYVDIK  G VHKGMPHKFYHGRTG+VWNVT RA+GV INK+
Subjt:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ

Q9FDZ9 60S ribosomal protein L21-22.1e-3884.81Show/hide
Query:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
        MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGRTG++WNVTKRA+GVE+NKQ
Subjt:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ

Q9UUC1 60S ribosomal protein L21-A8.5e-2464.1Show/hide
Query:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINK
        MP  +G+R+RTR  F R FR+ G I L+TYL+TYK+GD VDIKVNGAV KGMPHK+YHG+TG V+NVT+ ++GV I K
Subjt:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINK

Arabidopsis top hitse value%identityAlignment
AT1G09590.1 Translation protein SH3-like family protein1.5e-3984.81Show/hide
Query:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
        MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGRTG++WNVTKRA+GVE+NKQ
Subjt:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ

AT1G09690.1 Translation protein SH3-like family protein1.5e-3984.81Show/hide
Query:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
        MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGRTG++WNVTKRA+GVE+NKQ
Subjt:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ

AT1G57660.1 Translation protein SH3-like family protein1.5e-3984.81Show/hide
Query:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
        MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGRTG++WNVTKRA+GVE+NKQ
Subjt:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ

AT1G57860.1 Translation protein SH3-like family protein1.5e-3984.81Show/hide
Query:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
        MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGRTG++WNVTKRA+GVE+NKQ
Subjt:  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGCCGGCCATGGACTTCGTTCCCGTACCAGAGACCTCTTCGCCAGGCCTTTCAGGAAGAAGGGTTACATTGCTTTGACTACCTACTTGAGGACGTACAAAATCGG
TGATTATGTGGATATCAAGGTGAACGGCGCCGTCCACAAGGGTATGCCTCATAAATTTTACCATGGTCGCACAGGTCAGGTATGGAATGTGACAAAGCGCGCCATCGGCG
TTGAGATCAACAAGCAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGGCCGGCCATGGACTTCGTTCCCGTACCAGAGACCTCTTCGCCAGGCCTTTCAGGAAGAAGGGTTACATTGCTTTGACTACCTACTTGAGGACGTACAAAATCGG
TGATTATGTGGATATCAAGGTGAACGGCGCCGTCCACAAGGGTATGCCTCATAAATTTTACCATGGTCGCACAGGTCAGGTATGGAATGTGACAAAGCGCGCCATCGGCG
TTGAGATCAACAAGCAG
Protein sequenceShow/hide protein sequence
MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ