CuGenDBv2

Gene ID	Chy4G086090
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	40S ribosomal protein S17-like
Genome location	chrH04:24996070..24996601
RNA-Seq Expression	Chy4G086090
Synteny	Chy4G086090
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001210 - Ribosomal protein S17e IPR018273 - Ribosomal protein S17e, conserved site IPR036401 - Ribosomal protein S17e-like superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8651099.1 hypothetical protein Csa_001438 [Cucumis sativus]

1.17e-89

97.16

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMT+DFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGRSFVY
        ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGRS ++
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGRSFVY

XP_004136500.1 40S ribosomal protein S17 [Cucumis sativus]

2.34e-89

97.84

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMT+DFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGRSF
        ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGR +
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGRSF

XP_008442886.1 PREDICTED: 40S ribosomal protein S17-like [Cucumis melo]

1.16e-89

98.56

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGRSF
        ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGR +
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGRSF

XP_022144698.1 40S ribosomal protein S17-like [Momordica charantia]

3.30e-87

98.53

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKT+QIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRG
        ETLDMLSALGMNDIPGLVQVDP+VPQQVGFGLGGRG
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRG

XP_038904935.1 40S ribosomal protein S17-like [Benincasa hispida]

6.70e-89

96.4

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD+SA+KT+QIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGRSF
        ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGR +
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGRSF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LB02 40S ribosomal protein S17

6.5e-68

97.84

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMT+DFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGRSF
        ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGR +
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGRSF

A0A1S3B6R7 40S ribosomal protein S17-like

3.8e-68

98.56

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGRSF
        ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGR +
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGRSF

A0A5A7TQK2 40S ribosomal protein S17-like

3.8e-68

98.56

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGRSF
        ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGR +
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGRSF

A0A6J1CU03 40S ribosomal protein S17-like

2.1e-66

98.53

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKT+QIEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRG
        ETLDMLSALGMNDIPGLVQVDP+VPQQVGFGLGGRG
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRG

A0A6J1FC93 40S ribosomal protein S17-like

8.0e-66

94.96

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKT+QIEVD+
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGRSF
        ETLDMLSALGM DIPG+VQVDPTVPQQV FGLGGRGR +
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGRGRSF

SwissProt top hits

e value

%identity

Alignment

P49205 40S ribosomal protein S17-1

1.2e-53

88.52

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKT++I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDP
        ETL+ML++LGM+D  G+  VDP
Subjt:  ETLDMLSALGMNDIPGLVQVDP

P49215 40S ribosomal protein S17

1.1e-56

82.76

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIERYYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKT+ IEVDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQV------GFGLGGRGRSF
        ETLDMLSALGM+D+PG+V+     PQ V      G G GG GR +
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQV------GFGLGGRGRSF

Q9LZ17 40S ribosomal protein S17-4

2.3e-54

88.52

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKT++I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDP
        ETL+ML++LGM+D PG+  V+P
Subjt:  ETLDMLSALGMNDIPGLVQVDP

Q9SJ36 40S ribosomal protein S17-2

4.0e-54

81.48

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKT++I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
        ETL+ML++LGM+D  G+  V+P          GGR
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR

Q9SQZ1 40S ribosomal protein S17-3

7.5e-53

87.6

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Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIK + ++VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVD
        ETL+ML++LGM+DI G+ QV+
Subjt:  ETLDMLSALGMNDIPGLVQVD

Arabidopsis top hits

e value

%identity

Alignment

AT2G05220.1 Ribosomal S17 family protein

2.8e-55

81.48

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKT++I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR
        ETL+ML++LGM+D  G+  V+P          GGR
Subjt:  ETLDMLSALGMNDIPGLVQVDPTVPQQVGFGLGGR

AT5G04800.1 Ribosomal S17 family protein

1.6e-55

88.52

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKT++I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDP
        ETL+ML++LGM+D PG+  V+P
Subjt:  ETLDMLSALGMNDIPGLVQVDP

AT5G04800.2 Ribosomal S17 family protein

1.6e-55

88.52

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKT++I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDP
        ETL+ML++LGM+D PG+  V+P
Subjt:  ETLDMLSALGMNDIPGLVQVDP

AT5G04800.3 Ribosomal S17 family protein

1.6e-55

88.52

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKT++I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDP
        ETL+ML++LGM+D PG+  V+P
Subjt:  ETLDMLSALGMNDIPGLVQVDP

AT5G04800.4 Ribosomal S17 family protein

1.6e-55

88.52

Show/hide

Query:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK
        MGRVRTKTVKKSSRQVIE+YYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPD SAIKT++I+VDK
Subjt:  MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDK

Query:  ETLDMLSALGMNDIPGLVQVDP
        ETL+ML++LGM+D PG+  V+P
Subjt:  ETLDMLSALGMNDIPGLVQVDP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGTCGCGTACGCACCAAAACAGTGAAGAAATCTTCCCGCCAAGTTATTGAGCGCTACTACTCGCGCATGACCCTCGACTTCCACACCAACAAGAAGATCCTC
GAAGAAGTTGCCATTATTCCCTCCAAGAGACTACGAAATAAGATCGCCGGATTCTCCACTCACCTCATGAAGCGAATCCAGAAAGGACCTGTTCGCGGCATCTCT
CTGAAGCTCCAAGAGGAAGAGCGCGAGCGCCGAATGGACTTCGTTCCAGACGTCTCCGCCATTAAAACCGAGCAAATCGAAGTGGATAAGGAGACTCTCGATATG
CTTTCTGCGCTTGGAATGAACGATATTCCGGGGCTTGTTCAGGTCGATCCGACTGTGCCGCAGCAGGTTGGATTTGGATTAGGAGGTCGCGGTAGGAGTTTTGTT
TATGGGCATTGTTACTTTCTGCTAAGCTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTEQIEVDKETLDM
LSALGMNDIPGLVQVDPTVPQQVGFGLGGRGRSFVYGHCYFLLS

Chy4G086090 (gene) of Cucumber (hystrix) v1 genome