; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy4G087290 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G087290
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
Genome locationchrH04:25854067..25858311
RNA-Seq ExpressionChy4G087290
SyntenyChy4G087290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONK68909.1 uncharacterized protein A4U43_C05F17300, partial [Asparagus officinalis]5.49e-0438.05Show/hide
Query:  LGSPSCDTVALSNWKLFNALRLEFKHRRVCSRRADDHMAVVCRSSVQC*ANCGGVEGGCECGGGNSFTLGRRRGERGDGEERRSERSH*KGDG-WRKQRR
        LG+ S +T    +W +F+ALR+EF  R    R A+DHMA V R+  +     G  +   + G      L R RGE+  GE R  ++S  +GDG WR  R 
Subjt:  LGSPSCDTVALSNWKLFNALRLEFKHRRVCSRRADDHMAVVCRSSVQC*ANCGGVEGGCECGGGNSFTLGRRRGERGDGEERRSERSH*KGDG-WRKQRR

Query:  DEREIQKAC*NGE
        +E E + AC +GE
Subjt:  DEREIQKAC*NGE
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCACTCACACATTCTTCTCTTCCCCTTCATGGCTCAAGGCCACATGATCCCCATGATTGACCTCGCCAAGCTTCTCGCCCACCATGGTTTCATAATCAC
CATCGTTACCACCCCCCACAACGTTGAACGTTACCACTCTTTTCTTGCTCGTGCCACCCATTCTGGCTTACAAATTCATGTGGCTCTTCTACCATTCCCATCCCT
CCAAGTCGGTCTCCCAGAAGGGTGTGAAAATCTGGACTTGCTACCTTCACCGCTTTCTTTTTCCATGTCAGCTTTTTACAGAGCAACTTGTCTTCTTTACGAACC
ATCGGAAAAGTTGTTCCACCAACTCTGCCCTCGTCCAAGTTGCATAATCTCCGATATGTGCCTCCCTTGGACTCTACGCCTTGCTCGGAATCATCAAATTCCAAG
GCTAGTTTTCTACAGTTTGAGCTGCTTCTACCTTCTATGCATGCGGAGTTTGAAAACCAATCATGCTTTCATAACCTCCATCTCTGATTCTGAATTCCTGACTTT
ACCTGACTTGCCCGATCCTGTCGAGTTCCTCAAATCCCAGCTGCCTGTAGTGAAAATTGAAGCAATGAGGAATTTCGGTTCTGAGATTGTGGAGGCGGATCAGCA
TTCTGATGGCGTTATTTTAAATGTTTTTGAGGAGATGGAAACTGAGTATGTGACAGAGTATAGAAAGAGCATAGACTGGCCGCAAAAAGTTTGGTGTGTCGGCCC
TGTTTCGCTTTGCAACGACAATGCGCTGGACAAAGCTGATAGAGGCGAGAGACCCTCAATCAACAAAGACGAATGCATCAACTGGCTGGACGGGCAGGAACCATC
TTCAGTGATTTACGTCTCTCTGGGAAGTCTCTGCACTTTAAGAACACCCCAATTCATAGAACTGGGGTTGGGGTTGGAAGCATCGAAGAAACCATTTATTTGGGT
CATAAGAAAAGGAAACCTCACAGAGGAATTACAGAGATGGATAATGGAGTATGATTTTGAGAGGAAAACTGAAGGATGGGGCCTTGTAATTCGTGGTTGGGCTCC
CCAAGTTGCGATACTGTCGCACTCAGCAATTGGAAGCTTTTTAACGCATTGCGGTTGGAATTCAAGCATCGAAGGGTTTGCAGCCGGCGTGCCGATGATCACATG
GCCGTTGTTTGCAGATCAAGTGTTCAATGCTAAGCTAATTGTGGAGGTGTTGAAGGTGGGTGTGAGTGTGGGGGAGGAAACAGCTTTACATTGGGGAGAAGAAGA
GGAGAAAGAGGTGATGGTGAAGAGAGAAGAAGTGAGAGAAGCCATTGAAAAGGTGATGGATGGAGAAAACAGAGAAGAGATGAAAGAGAGATCCAAAAAGCTTGC
TGAAATGGCGAAGAGAGCTGTAGAAGAAGGTGGTTCGTCTCATCAGAATCTCAAACAGTTGATTGAAGAAATTGTTTAAGATTTAGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCACTCACACATTCTTCTCTTCCCCTTCATGGCTCAAGGCCACATGATCCCCATGATTGACCTCGCCAAGCTTCTCGCCCACCATGGTTTCATAATCAC
CATCGTTACCACCCCCCACAACGTTGAACGTTACCACTCTTTTCTTGCTCGTGCCACCCATTCTGGCTTACAAATTCATGTGGCTCTTCTACCATTCCCATCCCT
CCAAGTCGGTCTCCCAGAAGGGTGTGAAAATCTGGACTTGCTACCTTCACCGCTTTCTTTTTCCATGTCAGCTTTTTACAGAGCAACTTGTCTTCTTTACGAACC
ATCGGAAAAGTTGTTCCACCAACTCTGCCCTCGTCCAAGTTGCATAATCTCCGATATGTGCCTCCCTTGGACTCTACGCCTTGCTCGGAATCATCAAATTCCAAG
GCTAGTTTTCTACAGTTTGAGCTGCTTCTACCTTCTATGCATGCGGAGTTTGAAAACCAATCATGCTTTCATAACCTCCATCTCTGATTCTGAATTCCTGACTTT
ACCTGACTTGCCCGATCCTGTCGAGTTCCTCAAATCCCAGCTGCCTGTAGTGAAAATTGAAGCAATGAGGAATTTCGGTTCTGAGATTGTGGAGGCGGATCAGCA
TTCTGATGGCGTTATTTTAAATGTTTTTGAGGAGATGGAAACTGAGTATGTGACAGAGTATAGAAAGAGCATAGACTGGCCGCAAAAAGTTTGGTGTGTCGGCCC
TGTTTCGCTTTGCAACGACAATGCGCTGGACAAAGCTGATAGAGGCGAGAGACCCTCAATCAACAAAGACGAATGCATCAACTGGCTGGACGGGCAGGAACCATC
TTCAGTGATTTACGTCTCTCTGGGAAGTCTCTGCACTTTAAGAACACCCCAATTCATAGAACTGGGGTTGGGGTTGGAAGCATCGAAGAAACCATTTATTTGGGT
CATAAGAAAAGGAAACCTCACAGAGGAATTACAGAGATGGATAATGGAGTATGATTTTGAGAGGAAAACTGAAGGATGGGGCCTTGTAATTCGTGGTTGGGCTCC
CCAAGTTGCGATACTGTCGCACTCAGCAATTGGAAGCTTTTTAACGCATTGCGGTTGGAATTCAAGCATCGAAGGGTTTGCAGCCGGCGTGCCGATGATCACATG
GCCGTTGTTTGCAGATCAAGTGTTCAATGCTAAGCTAATTGTGGAGGTGTTGAAGGTGGGTGTGAGTGTGGGGGAGGAAACAGCTTTACATTGGGGAGAAGAAGA
GGAGAAAGAGGTGATGGTGAAGAGAGAAGAAGTGAGAGAAGCCATTGAAAAGGTGATGGATGGAGAAAACAGAGAAGAGATGAAAGAGAGATCCAAAAAGCTTGC
TGAAATGGCGAAGAGAGCTGTAGAAGAAGGTGGTTCGTCTCATCAGAATCTCAAACAGTTGATTGAAGAAATTGTTTAAGATTTAGA
Protein sequenceShow/hide protein sequence
MPPLTHSSLPLHGSRPHDPHDPRQASRPPWFHNHHRYHPPQR*TLPLFSCSCHPFWLTNSCGSSTIPIPPSRSPRRVKSGLATFTAFFFHVSFLQSNLSSLRTIG
KVVPPTLPSSKLHNLRYVPPLDSTPCSESSNSKASFLQFELLLPSMHAEFENQSCFHNLHLF*IPDFT*LARSCRVPQIPAACSENSNEEFRF*DCGGGSAF*WR
YFKCF*GDGN*VCDRV*KEHRLAAKSLVCRPCFALQRQCAGQS*RRETLNQQRRMHQLAGRAGTIFSDLRLSGKSLHFKNTPIHRTGVGVGSIEETIYLGHKKRK
PHRGITEMDNGVF*EEN*RMGPCNSWLGSPSCDTVALSNWKLFNALRLEFKHRRVCSRRADDHMAVVCRSSVQCANCGGVEGGCECGGGNSFTLGRRRGERGDGE
ERRSERSHKGDGWRKQRRDEREIQKAC*NGEESCRRRWFVSSESQTVD*RNCLRFR