; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy4G088260 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G088260
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionzinc finger CCHC domain-containing protein 10 isoform X2
Genome locationchrH04:26426964..26427669
RNA-Seq ExpressionChy4G088260
SyntenyChy4G088260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044053.1 suppressor protein SRP40-like isoform X2 [Cucumis melo var. makuwa]8.09e-7691.61Show/hide
Query:  MVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISSEICNENEPKTPIEIQ
        MVEGGEVSKTMECLRRRLLAERHASLLAK+EAE+MDKR+SELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISSEICNE+EPKT IE+ 
Subjt:  MVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISSEICNENEPKTPIEIQ

Query:  PLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDEPSKT
        PLP NSKGI+EISHSEEENRN RGST+SNISASKI+SDEPSKT
Subjt:  PLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDEPSKT

XP_008442604.2 PREDICTED: uncharacterized protein LOC103486426 [Cucumis melo]9.15e-8691.14Show/hide
Query:  MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISS
        M+P TKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAK+EAE+MDKR+SELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISS
Subjt:  MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISS

Query:  EICNENEPKTPIEIQPLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDEPSKT
        EICNE+EPKT IE+ PLP NSKGI+EISHSEEENRN RGST+SNISASKI+SDEPSKT
Subjt:  EICNENEPKTPIEIQPLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDEPSKT

XP_011651920.1 uncharacterized protein LOC105434957 [Cucumis sativus]8.59e-9395.57Show/hide
Query:  MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISS
        MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKR+SELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEAS+SS
Subjt:  MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISS

Query:  EICNENEPKTPIEIQPLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDEPSKT
        EICNENEPKTPIE+QPLPS+SKGISEI HSEEENRN RGSTSSNISASKIHSD+PSKT
Subjt:  EICNENEPKTPIEIQPLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDEPSKT

XP_023538931.1 uncharacterized protein LOC111799712 [Cucurbita pepo subsp. pepo]3.92e-6073.89Show/hide
Query:  MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISS
        MA +TKMDIKWSGN M EG EV KTMECLRRRLLAER ASLLAK+EAELM KR++ELEKQIT+Q QM+ +AEKKLQLLKKKLESLNLS TM+NSE SISS
Subjt:  MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISS

Query:  EICNENEPKTPIEIQPLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDEPSK
        EIC+++EPKT      LPSNS+ I EISHS+EEN N RGSTSS+ S S+I S+E SK
Subjt:  EICNENEPKTPIEIQPLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDEPSK

XP_038906280.1 uncharacterized protein LOC120092141 [Benincasa hispida]8.79e-6981.65Show/hide
Query:  MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISS
        MAPN    IKWSGNKM EGGEVSKTMECLRRRLLAER ASLLAK+EAELM KR++ELEKQITKQIQMK +AEKKLQLLKKKL SLNLS+TMVNSEAS+SS
Subjt:  MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISS

Query:  EICNENEPKTPIEIQPLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDEPSKT
        EIC+E+EPKT IE+  L SNSK I EISH EEENRN RGSTSSN SAS+I SDEPSKT
Subjt:  EICNENEPKTPIEIQPLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDEPSKT

TrEMBL top hitse value%identityAlignment
A0A0A0LDB5 Uncharacterized protein1.8e-7195.57Show/hide
Query:  MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISS
        MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKR+SELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEAS+SS
Subjt:  MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISS

Query:  EICNENEPKTPIEIQPLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDEPSKT
        EICNENEPKTPIE+QPLPS+SKGISEI HSEEENRN RGSTSSNISASKIHSD+PSKT
Subjt:  EICNENEPKTPIEIQPLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDEPSKT

A0A1S3B6U8 uncharacterized protein LOC1034864267.9e-6791.14Show/hide
Query:  MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISS
        M+P TKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAK+EAE+MDKR+SELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISS
Subjt:  MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISS

Query:  EICNENEPKTPIEIQPLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDEPSKT
        EICNE+EPKT IE+ PLP NSKGI+EISHSEEENRN RGST+SNISASKI+SDEPSKT
Subjt:  EICNENEPKTPIEIQPLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDEPSKT

A0A5A7TKN7 Suppressor protein SRP40-like isoform X23.0e-5891.61Show/hide
Query:  MVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISSEICNENEPKTPIEIQ
        MVEGGEVSKTMECLRRRLLAERHASLLAK+EAE+MDKR+SELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISSEICNE+EPKT IE+ 
Subjt:  MVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISSEICNENEPKTPIEIQ

Query:  PLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDEPSKT
        PLP NSKGI+EISHSEEENRN RGST+SNISASKI+SDEPSKT
Subjt:  PLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDEPSKT

A0A6J1F6W6 uncharacterized protein LOC1114426658.5e-4574.03Show/hide
Query:  MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISS
        MA  TKMDIKWSGN M EG EV KTMECLRRRLLAER ASLLAK+EAELM KR++ELEKQIT+Q QM+ +AEKKLQLLKKKLESLNLS TM+NSE SISS
Subjt:  MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISS

Query:  EICNENEPKTPIEIQPLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDE
        EIC+E+EPKT      LP NS+ I EISHS+EEN N RGSTSS+ S S+I S+E
Subjt:  EICNENEPKTPIEIQPLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDE

A0A6J1L305 uncharacterized protein LOC1114986451.5e-4471.34Show/hide
Query:  MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISS
        MA +TK+DIKWSGN M EG EV KTMECLRRRLLAER ASLLAK+EAELM KR++ELEK+IT+Q QM+ +AEKKLQLLKKKLESL+LS TM+NSE SISS
Subjt:  MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISS

Query:  EICNENEPKTPIEIQPLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDEPSK
        EIC+E+EPKT      LP NS+ I EISHS+EEN N RG+TSS+ S S+I S+E SK
Subjt:  EICNENEPKTPIEIQPLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDEPSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G37300.1 unknown protein7.5e-0936.15Show/hide
Query:  EGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESL---NLSSTMVNSEASISSEICNENEPKTPIEI
        E  E  +T+ECLR RLLAER  S  AK+EAEL+ ++  ELE+ + ++I+++ +AEK+L+LL KKLE +     S    +SE S  S +C     +   E 
Subjt:  EGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESL---NLSSTMVNSEASISSEICNENEPKTPIEI

Query:  QPLPSNSKGISEISHSEEENRNTRGSTSSN
            +  +G  +  H+ E   +T  + SS+
Subjt:  QPLPSNSKGISEISHSEEENRNTRGSTSSN

AT2G37300.2 unknown protein6.8e-1035.37Show/hide
Query:  NTKMDIKWSGNKMVEGGEV---SKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESL---NLSSTMVNSEAS
        NTK    ++  KM E  E     +T+ECLR RLLAER  S  AK+EAEL+ ++  ELE+ + ++I+++ +AEK+L+LL KKLE +     S    +SE S
Subjt:  NTKMDIKWSGNKMVEGGEV---SKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESL---NLSSTMVNSEAS

Query:  ISSEICNENEPKTPIEIQPLPSNSKGISEISHSEEENRNTRGSTSSN
          S +C     +   E     +  +G  +  H+ E   +T  + SS+
Subjt:  ISSEICNENEPKTPIEIQPLPSNSKGISEISHSEEENRNTRGSTSSN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCCAATACCAAGATGGACATCAAATGGAGTGGCAACAAAATGGTGGAAGGTGGTGAAGTTTCTAAAACAATGGAGTGCCTAAGAAGGAGATTACTAGCAGAGAG
GCACGCATCATTACTTGCTAAAGATGAGGCAGAGCTCATGGACAAAAGGACATCAGAATTAGAGAAGCAGATCACAAAACAGATTCAAATGAAAGCACGAGCAGAAAAGA
AGCTTCAATTACTCAAGAAAAAGCTCGAATCACTTAACCTTTCTTCCACGATGGTGAACTCAGAGGCTTCAATTTCGTCGGAAATTTGCAACGAAAATGAACCGAAAACC
CCAATCGAAATTCAGCCTCTCCCAAGCAACTCCAAGGGCATTAGTGAAATCTCTCATTCGGAAGAAGAGAATCGAAATACTCGTGGTTCTACAAGCTCGAACATCTCTGC
TTCTAAAATTCACTCCGACGAACCTTCAAAAACGATTGAAGCCGGTGATCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACCCAATACCAAGATGGACATCAAATGGAGTGGCAACAAAATGGTGGAAGGTGGTGAAGTTTCTAAAACAATGGAGTGCCTAAGAAGGAGATTACTAGCAGAGAG
GCACGCATCATTACTTGCTAAAGATGAGGCAGAGCTCATGGACAAAAGGACATCAGAATTAGAGAAGCAGATCACAAAACAGATTCAAATGAAAGCACGAGCAGAAAAGA
AGCTTCAATTACTCAAGAAAAAGCTCGAATCACTTAACCTTTCTTCCACGATGGTGAACTCAGAGGCTTCAATTTCGTCGGAAATTTGCAACGAAAATGAACCGAAAACC
CCAATCGAAATTCAGCCTCTCCCAAGCAACTCCAAGGGCATTAGTGAAATCTCTCATTCGGAAGAAGAGAATCGAAATACTCGTGGTTCTACAAGCTCGAACATCTCTGC
TTCTAAAATTCACTCCGACGAACCTTCAAAAACGATTGAAGCCGGTGATCAGTGA
Protein sequenceShow/hide protein sequence
MAPNTKMDIKWSGNKMVEGGEVSKTMECLRRRLLAERHASLLAKDEAELMDKRTSELEKQITKQIQMKARAEKKLQLLKKKLESLNLSSTMVNSEASISSEICNENEPKT
PIEIQPLPSNSKGISEISHSEEENRNTRGSTSSNISASKIHSDEPSKTIEAGDQ