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Chy4G089030 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G089030
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionDynein light chain
Genome locationchrH04:26870569..26871530
RNA-Seq ExpressionChy4G089030
SyntenyChy4G089030
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8518956.1 hypothetical protein F0562_016270 [Nyssa sinensis]3.98e-5877.57Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEE
        MLEGKAV+RETDMP+ +QSHV+ELAY+ALD HE SDCQSIAH+IKQ+FDEAYGPAWHCV GK FG CITHLCGSFIFF VD MEFLVFKDG+D  +S EE
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEE

Query:  TVGVCRK
         +GV +K
Subjt:  TVGVCRK

KGN58830.1 hypothetical protein Csa_001625 [Cucumis sativus]8.29e-7799.07Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEE
        MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGS+IFFHVDTMEFLVFKDGRDCFKSVEE
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEE

Query:  TVGVCRKY
        TVGVCRKY
Subjt:  TVGVCRKY

XP_004305172.1 PREDICTED: dynein light chain LC6, flagellar outer arm-like [Fragaria vesca subsp. vesca]4.50e-5779.81Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEE
        MLEGKAVVRETDMP  +QSH +ELAYKALD HEVSDC+SIAH+IKQ+FDEAYGPAWHCV GK FG CITHLCGSFIFFHV+ MEFL+FKDG D  KS EE
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEE

Query:  TVGV
         +GV
Subjt:  TVGV

XP_008442502.1 PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo]4.81e-7699.07Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEE
        MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDC KSVEE
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEE

Query:  TVGVCRKY
        TVGVCRKY
Subjt:  TVGVCRKY

XP_022145583.1 dynein light chain-like [Momordica charantia]1.62e-6587.85Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEE
        MLEGKA VRETDMP+GIQSHVLELAYKALD HEVSDCQSIA FIKQRFDEAYGPAWHCV GKAFGGCITHLCGSFIFFHVD MEFL+FKDGRD  KS+EE
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEE

Query:  TVGVCRK
        T+GV +K
Subjt:  TVGVCRK

TrEMBL top hitse value%identityAlignment
A0A0A0LA26 Dynein light chain9.9e-5899.07Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEE
        MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGS+IFFHVDTMEFLVFKDGRDCFKSVEE
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEE

Query:  TVGVCRKY
        TVGVCRKY
Subjt:  TVGVCRKY

A0A1S3B5U2 Dynein light chain3.8e-5799.07Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEE
        MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDC KSVEE
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEE

Query:  TVGVCRKY
        TVGVCRKY
Subjt:  TVGVCRKY

A0A5J4ZMN8 Dynein light chain1.4e-4377.57Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEE
        MLEGKAV+RETDMP+ +QSHV+ELAY+ALD HE SDCQSIAH+IKQ+FDEAYGPAWHCV GK FG CITHLCGSFIFF VD MEFLVFKDG+D  +S EE
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEE

Query:  TVGVCRK
         +GV +K
Subjt:  TVGVCRK

A0A6J1CWC6 Dynein light chain3.8e-4987.85Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEE
        MLEGKA VRETDMP+GIQSHVLELAYKALD HEVSDCQSIA FIKQRFDEAYGPAWHCV GKAFGGCITHLCGSFIFFHVD MEFL+FKDGRD  KS+EE
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEE

Query:  TVGVCRK
        T+GV +K
Subjt:  TVGVCRK

W9QN85 Dynein light chain9.0e-4376.64Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEE
        MLEGKAVVRETDM Q +QSHV+ELAYKALD HEVSDCQSIAH+IKQ+FDEAYGPAWHCV G  FG CITHLCGSFIFFHV+ MEFL+FKDG+D  +S +E
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEE

Query:  TVGVCRK
         +GV ++
Subjt:  TVGVCRK

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm1.3e-1438.46Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDG
        M E KAV++  DMP+ +Q   ++ A +AL++  +   + IA +IK+ FD+ Y P WHC+ G+ FG  +TH    FI+F++  +  L+FK G
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDG

O96860 Dynein light chain 2, cytoplasmic5.0e-1437.36Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDG
        M + KAV++  DM + +Q   ++ A +AL+++ +   + IA FIK+ FD+ Y P WHC+ G+ FG  +TH    FI+F++  +  L+FK G
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDG

Q22799 Dynein light chain 1, cytoplasmic5.0e-1436.26Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDG
        M++ KAV++  DM   +Q   ++ A +AL+++ +   + IA +IK+ FD+ Y P WHC+ G+ FG  +TH    FI+F++  +  L+FK G
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDG

Q94748 Probable dynein light chain1.0e-1440.66Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDG
        M E KAV++  DM + +Q   +  A  ALD++E+   + +A +IK+ FD  Y P WHC+ GK FG  +TH    FI+F++    FL+FK G
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDG

Q94758 Dynein light chain4.5e-1540.66Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDG
        M E KAV++  DM + +Q   + +A  A+D+H++   + IA  IK+ FD  Y P WHC+ G+ FG  +TH   +FI+F++D   FL+FK G
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDG

Arabidopsis top hitse value%identityAlignment
AT1G23220.1 Dynein light chain type 1 family protein3.9e-1440.96Show/hide
Query:  VRETDMPQGIQSHVLELAYKALDQHE-VSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFK
        VR +DMP   Q+    L+ + L+     +D + +AH +K+ FD AYGPAWHC+ G +FG  +TH  G F++F +D +  L+FK
Subjt:  VRETDMPQGIQSHVLELAYKALDQHE-VSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFK

AT1G52240.2 RHO guanyl-nucleotide exchange factor 115.6e-2150.56Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFK
        MLEGKA+V ++DMP  +Q   +  A +ALD  +V DC+SIA  IK+ FDE YG  W CV G  FG   TH  G+FI+F ++T++FL+FK
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFK

AT3G16120.1 Dynein light chain type 1 family protein2.8e-2051.69Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFK
        MLEGKA V ETDMP  +Q   +++A ++LD  +V D  SIA  IK+ FDE YG  W CV G  FG   TH  G+FI+FH+ T+ FL+FK
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFK

AT4G27360.1 Dynein light chain type 1 family protein1.2e-1848.31Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFK
        MLEGKAV+ +TDM Q ++   L LA KALD  +V++   IA FIK+ FD +YG  W C+ G  FG  +TH  G FI F V ++  L+FK
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFK

AT5G20110.1 Dynein light chain type 1 family protein1.8e-1442.31Show/hide
Query:  DMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFK
        DMP  +Q+H    A   LD  E    + +A  +K+ FD+ YGPAWHC+ G +FG  +TH  G FI+F +D +  L+FK
Subjt:  DMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAGGGCAAAGCTGTGGTCCGCGAAACAGACATGCCACAGGGGATCCAGAGCCATGTCCTTGAGTTGGCTTATAAAGCACTTGATCAACACGAAGTTTCTGACTG
TCAATCTATTGCACATTTTATCAAACAGAGATTTGATGAAGCTTATGGCCCAGCATGGCATTGTGTGGCGGGCAAAGCGTTTGGAGGTTGCATTACACATCTATGTGGGA
GTTTCATCTTCTTCCATGTGGACACGATGGAGTTTCTCGTCTTTAAGGACGGAAGAGACTGCTTCAAAAGTGTCGAAGAGACTGTTGGAGTTTGCCGGAAATATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAGGGCAAAGCTGTGGTCCGCGAAACAGACATGCCACAGGGGATCCAGAGCCATGTCCTTGAGTTGGCTTATAAAGCACTTGATCAACACGAAGTTTCTGACTG
TCAATCTATTGCACATTTTATCAAACAGAGATTTGATGAAGCTTATGGCCCAGCATGGCATTGTGTGGCGGGCAAAGCGTTTGGAGGTTGCATTACACATCTATGTGGGA
GTTTCATCTTCTTCCATGTGGACACGATGGAGTTTCTCGTCTTTAAGGACGGAAGAGACTGCTTCAAAAGTGTCGAAGAGACTGTTGGAGTTTGCCGGAAATATTAA
Protein sequenceShow/hide protein sequence
MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQRFDEAYGPAWHCVAGKAFGGCITHLCGSFIFFHVDTMEFLVFKDGRDCFKSVEETVGVCRKY