; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy4G089390 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G089390
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptiontranscription factor DIVARICATA-like
Genome locationchrH04:27036520..27038360
RNA-Seq ExpressionChy4G089390
SyntenyChy4G089390
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017884 - SANT domain
IPR017930 - Myb domain
IPR043363 - Transcription factor DIVARICATA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137732.1 transcription factor DIVARICATA [Cucumis sativus]8.35e-8988.44Show/hide
Query:  MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGG
        MKRGIGILSPATYLRNSG SKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTV DVVKQYRELVEDVSDIEAGLVPVPGY VGNSFVLEWSSDGGG
Subjt:  MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGG

Query:  FAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEHSGNLKVARAIGNSN
        FAP+YIG GKRGGCGRPSDQERKKGVPWTEEEH   L   +  G  +
Subjt:  FAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEHSGNLKVARAIGNSN

XP_008442463.1 PREDICTED: transcription factor DIVARICATA-like [Cucumis melo]2.24e-8385.03Show/hide
Query:  MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGG
        MKRGIGILSPATYLRNSG SKWTPEENKRFENALALFD DTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGY VGNSFVLEWS+DGG 
Subjt:  MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGG

Query:  FAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEHSGNLKVARAIGNSN
        FAP+YIG GKRGG  R SDQERKKGVPWTEEEH   L   +  G  +
Subjt:  FAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEHSGNLKVARAIGNSN

XP_022971415.1 transcription factor DIVARICATA-like [Cucurbita maxima]6.85e-7074.15Show/hide
Query:  MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGG
        MKRGIGILSPAT  R+S  S WT EENKRFENALALFD D+ DRW+KVAAMIPGKTVGDV+ QYRELV DVSDIEAGLVP+PGYA GNSFVLEWS+DG G
Subjt:  MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGG

Query:  FAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEHSGNLKVARAIGNSN
        F  +Y G GKRG  GRPSD ERKKGVPWTEEEH   L   +  G  +
Subjt:  FAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEHSGNLKVARAIGNSN

XP_023538833.1 transcription factor DIVARICATA-like [Cucurbita pepo subsp. pepo]3.81e-6973.47Show/hide
Query:  MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGG
        MKRGIG LSPAT  R+S  S WT EENKRFENALALFD D+ DRW+KVAAMIPGKTVGDV+K YRELV DVSDIEAGLVP+PGYA GNSFVLEWS+DG G
Subjt:  MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGG

Query:  FAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEHSGNLKVARAIGNSN
        F  +Y G GKRG  GRPSD ERKKGVPWTEEEH   L   +  G  +
Subjt:  FAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEHSGNLKVARAIGNSN

XP_038906337.1 transcription factor DIVARICATA-like [Benincasa hispida]6.46e-8482.31Show/hide
Query:  MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGG
        MKRGIGILSPATYLRNSG+SKWTPEENKRFENALALFD DTPDRW+KVAAMIPGKTVGDVVKQYRELVEDVSDIEAG +P+PGY VGNSFVLEWS+D GG
Subjt:  MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGG

Query:  FAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEHSGNLKVARAIGNSN
        F P+YIG GKRGG GRPSDQERKKGVPWTE+EH   L   +  G  +
Subjt:  FAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEHSGNLKVARAIGNSN

TrEMBL top hitse value%identityAlignment
A0A0A0L9Y9 Uncharacterized protein3.5e-6996.24Show/hide
Query:  MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGG
        MKRGIGILSPATYLRNSG SKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTV DVVKQYRELVEDVSDIEAGLVPVPGY VGNSFVLEWSSDGGG
Subjt:  MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGG

Query:  FAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEH
        FAP+YIG GKRGGCGRPSDQERKKGVPWTEEEH
Subjt:  FAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEH

A0A1S3B587 transcription factor DIVARICATA-like5.2e-6592.48Show/hide
Query:  MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGG
        MKRGIGILSPATYLRNSG SKWTPEENKRFENALALFD DTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGY VGNSFVLEWS+DGG 
Subjt:  MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGG

Query:  FAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEH
        FAP+YIG GKRGG  R SDQERKKGVPWTEEEH
Subjt:  FAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEH

A0A5A7TKX4 Transcription factor DIVARICATA-like5.2e-6592.48Show/hide
Query:  MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGG
        MKRGIGILSPATYLRNSG SKWTPEENKRFENALALFD DTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGY VGNSFVLEWS+DGG 
Subjt:  MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGG

Query:  FAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEH
        FAP+YIG GKRGG  R SDQERKKGVPWTEEEH
Subjt:  FAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEH

A0A6J1CWZ0 transcription factor DIVARICATA-like5.4e-5478.2Show/hide
Query:  MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGG
        MKRGIGI SP +       +KWTPEENKRFENALA FD DTPDRW+KVAAMIPGKTVGDV+KQYR+LVEDVSDIEAGL+P+PGYA GNSFVLEWS+ GGG
Subjt:  MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGG

Query:  FAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEH
        F  ++ G GKRGG GRPSDQ+RKKGVPWTEEEH
Subjt:  FAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEH

A0A6J1I5P4 transcription factor DIVARICATA-like1.1e-5480.45Show/hide
Query:  MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGG
        MKRGIGILSPAT  R+S  S WT EENKRFENALALFD D+ DRW+KVAAMIPGKTVGDV+ QYRELV DVSDIEAGLVP+PGYA GNSFVLEWS+DG G
Subjt:  MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGG

Query:  FAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEH
        F  +Y G GKRG  GRPSD ERKKGVPWTEEEH
Subjt:  FAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEH

SwissProt top hitse value%identityAlignment
B8A9B2 Transcription factor MYBS14.5e-1338.52Show/hide
Query:  WTPEENKRFENALALFDIDTP--------DRWVKVAAMIPG-KTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGGFAPLYIGTG---
        WT E++K FENALA      P        D +  +AA +PG ++  +V + Y  LVEDV+ I+AG VP+P YA   S       DG G A      G   
Subjt:  WTPEENKRFENALALFDIDTP--------DRWVKVAAMIPG-KTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGGFAPLYIGTG---

Query:  ---KRGGCG--------RPSDQERKKGVPWTEEEH
           ++GG G          ++QER+KG+PWTEEEH
Subjt:  ---KRGGCG--------RPSDQERKKGVPWTEEEH

Q1A173 Protein RADIALIS-like 65.3e-1454.41Show/hide
Query:  SGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGY
        S  S WT  +NK FE ALA++D DTPDRW  VA  + GKTV +V + Y  LVED+ +IE G VP+P Y
Subjt:  SGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGY

Q58FS3 Transcription factor RADIALIS1.5e-1352.86Show/hide
Query:  RNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGY
        R SG   W+ +ENK FE ALA++D DTPDRW  VA  + G+T  +V K Y  LVED+  IE+G VP P Y
Subjt:  RNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGY

Q8S9H7 Transcription factor DIVARICATA1.8e-3856.2Show/hide
Query:  ILSPATYLRNSGF--------SKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDG
        IL+P++Y  +S +        ++WT  ENK FENALA+FD +TP+RW +VA  +PGKTVGDV++QY+EL +DVS IEAG VPVPGY+  + F LEW S  
Subjt:  ILSPATYLRNSGF--------SKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDG

Query:  G--GFAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEH
        G  GF   Y   G++   GRPS+QERKKGVPWTEEEH
Subjt:  G--GFAPLYIGTGKRGGCGRPSDQERKKGVPWTEEEH

Q9FNN6 Transcription factor SRM11.3e-1541.18Show/hide
Query:  SKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGY-----AVGNSFVLEWSSDGGGFAPLYIGTGKRGGC
        S W+ E++  FE ALA    ++ +RW K+AA +PGK+V  + + Y  LVEDV+ IE+G VP+P Y     + G++     SS  GG +  + G   + G 
Subjt:  SKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGY-----AVGNSFVLEWSSDGGGFAPLYIGTGKRGGC

Query:  GRPSDQERKKGVPWTEEEH
         + SDQER+KG+ WTE+EH
Subjt:  GRPSDQERKKGVPWTEEEH

Arabidopsis top hitse value%identityAlignment
AT2G38090.1 Duplicated homeodomain-like superfamily protein6.6e-4459.73Show/hide
Query:  MKRGIGILSPATYLRNSGF-------SKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLE
        M RGI ++SPATYL  S +       +KWT EENK+FENALA +D DTPDRW +VAAM+PGKTVGDV+KQYREL EDVSDIEAGL+P+PGYA  +SF L+
Subjt:  MKRGIGILSPATYLRNSGF-------SKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLE

Query:  W-----SSDGGGFAP----LYIGTGKRGGCGRPSDQERKKGVPWTEEEH
        W     +S   GF           GKRG   R ++ ERKKGVPWTEEEH
Subjt:  W-----SSDGGGFAP----LYIGTGKRGGCGRPSDQERKKGVPWTEEEH

AT3G11280.1 Duplicated homeodomain-like superfamily protein3.2e-3056.1Show/hide
Query:  LRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGGFAPLYIGTG---K
        L +S    WT EENK FE ALA++  D+PDRW KVA+MIPGKTV DV+KQY +L EDV DIEAG VP+PGY   +S             PL   T    K
Subjt:  LRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGGFAPLYIGTG---K

Query:  RGGCGRPSDQERKKGVPWTEEEH
        R    R SDQ+RKKGVPWTEEEH
Subjt:  RGGCGRPSDQERKKGVPWTEEEH

AT3G11280.2 Duplicated homeodomain-like superfamily protein3.2e-3056.1Show/hide
Query:  LRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGGFAPLYIGTG---K
        L +S    WT EENK FE ALA++  D+PDRW KVA+MIPGKTV DV+KQY +L EDV DIEAG VP+PGY   +S             PL   T    K
Subjt:  LRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGGFAPLYIGTG---K

Query:  RGGCGRPSDQERKKGVPWTEEEH
        R    R SDQ+RKKGVPWTEEEH
Subjt:  RGGCGRPSDQERKKGVPWTEEEH

AT5G05790.1 Duplicated homeodomain-like superfamily protein2.3e-2855.65Show/hide
Query:  SKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGGF-APLYIGTGKRGGCGRPS
        S WT EENK+FE ALA++  DTPDRW KVAAMIPGKT+ DV++QY +L ED+ DIEAGLVP+PGY        +       F A   +  G RG      
Subjt:  SKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGGF-APLYIGTGKRGGCGRPS

Query:  DQERKKGVPWTEEEH
        DQ+R+KGVPWTEEEH
Subjt:  DQERKKGVPWTEEEH

AT5G58900.1 Homeodomain-like transcriptional regulator1.9e-3560.87Show/hide
Query:  WTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGG---GFAPLYIGTGKRGGCGRPS
        WT  ENK FENALA++D +TPDRW KVAA+IPGKTV DV++QY +L  DVS IEAGL+PVPGY     F L+W+  GG   GF P +    KR   GR  
Subjt:  WTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGG---GFAPLYIGTGKRGGCGRPS

Query:  DQERKKGVPWTEEEH
        + ERKKGVPWTEEEH
Subjt:  DQERKKGVPWTEEEH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACGAGGGATTGGGATTCTCTCTCCAGCGACCTACCTACGAAATTCCGGCTTCTCCAAGTGGACGCCGGAGGAGAACAAACGGTTCGAAAATGCTTTGGCT
TTGTTCGATATAGATACGCCGGACCGGTGGGTGAAAGTCGCCGCCATGATTCCTGGAAAAACCGTCGGCGATGTGGTGAAACAGTACAGAGAATTGGTGGAGGAC
GTGAGTGATATTGAAGCAGGGCTTGTTCCGGTTCCGGGGTATGCCGTTGGGAACTCTTTTGTGTTGGAGTGGTCGAGTGATGGCGGAGGGTTTGCACCGTTGTAT
ATCGGCACCGGGAAGAGAGGCGGTTGCGGTCGGCCTTCCGATCAGGAAAGGAAGAAGGGAGTGCCTTGGACTGAGGAAGAGCACAGTGGAAATCTCAAGGTGGCA
AGAGCTATTGGGAATTCAAACATTCCAATTCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACGAGGGATTGGGATTCTCTCTCCAGCGACCTACCTACGAAATTCCGGCTTCTCCAAGTGGACGCCGGAGGAGAACAAACGGTTCGAAAATGCTTTGGCT
TTGTTCGATATAGATACGCCGGACCGGTGGGTGAAAGTCGCCGCCATGATTCCTGGAAAAACCGTCGGCGATGTGGTGAAACAGTACAGAGAATTGGTGGAGGAC
GTGAGTGATATTGAAGCAGGGCTTGTTCCGGTTCCGGGGTATGCCGTTGGGAACTCTTTTGTGTTGGAGTGGTCGAGTGATGGCGGAGGGTTTGCACCGTTGTAT
ATCGGCACCGGGAAGAGAGGCGGTTGCGGTCGGCCTTCCGATCAGGAAAGGAAGAAGGGAGTGCCTTGGACTGAGGAAGAGCACAGTGGAAATCTCAAGGTGGCA
AGAGCTATTGGGAATTCAAACATTCCAATTCCATAA
Protein sequenceShow/hide protein sequence
MKRGIGILSPATYLRNSGFSKWTPEENKRFENALALFDIDTPDRWVKVAAMIPGKTVGDVVKQYRELVEDVSDIEAGLVPVPGYAVGNSFVLEWSSDGGGFAPLY
IGTGKRGGCGRPSDQERKKGVPWTEEEHSGNLKVARAIGNSNIPIP