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Chy4G090060 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy4G090060
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionSel1-like protein
Genome locationchrH04:27423773..27424502
RNA-Seq ExpressionChy4G090060
SyntenyChy4G090060
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR006597 - Sel1-like repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442362.1 PREDICTED: uncharacterized protein LOC103486254 [Cucumis melo]2.13e-6498Show/hide
Query:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISG TE LNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

XP_011651845.1 uncharacterized protein LOC101206121 [Cucumis sativus]1.28e-65100Show/hide
Query:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

XP_022157335.1 uncharacterized protein LOC111024062 [Momordica charantia]3.54e-6396Show/hide
Query:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISG TE L+RVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

XP_022934323.1 uncharacterized protein LOC111441521 [Cucurbita moschata]7.14e-6395Show/hide
Query:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISG TE L+RVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

XP_022971526.1 uncharacterized protein LOC111470221 [Cucurbita maxima]1.69e-6193Show/hide
Query:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISG TEALNRVPLSEVVSDCVKRWFKDTL EAK GDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD++T DS
Subjt:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

TrEMBL top hitse value%identityAlignment
A0A0A0LCP0 Uncharacterized protein9.2e-50100Show/hide
Query:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

A0A1S3B5I4 uncharacterized protein LOC1034862547.8e-4998Show/hide
Query:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISG TE LNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

A0A5D3DNP0 Sel1-like protein7.8e-4998Show/hide
Query:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISG TE LNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

A0A6J1DSS4 uncharacterized protein LOC1110240626.6e-4896Show/hide
Query:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISG TE L+RVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

A0A6J1J881 uncharacterized protein LOC1114821711.1e-4795Show/hide
Query:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
        MEISG TE L+RVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS
Subjt:  MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38450.1 CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597)5.7e-3682.93Show/hide
Query:  VPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD
        VPLS VVSDC KRWFKDTL+EAKAG+I MQVL+GQMYYSGYGVP+DA+KGR+W+TKASR RSSVWKV DK PGYNASDSDS+
Subjt:  VPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD

AT5G05360.1 unknown protein3.7e-3568.48Show/hide
Query:  SGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDE
        +  ++ +NRVPL++VV DCV+RWF+DTLKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR W+ KASR+RSS W+VSDK PGYNASDSDS++
Subjt:  SGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDE

AT5G05360.2 unknown protein5.5e-3166.67Show/hide
Query:  SGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN
        +  ++ +NRVPL++VV DCV+RWF+DTLKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR W+ KASR+RSS W+VSDK PG N
Subjt:  SGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTAGCGGAGCAACAGAGGCCTTGAATCGCGTTCCTTTATCAGAGGTTGTTTCTGATTGCGTCAAAAGATGGTTTAAGGACACTTTGAAGGAAGCCAAAGCTGG
CGATATCAACATGCAGGTCTTGGTGGGTCAAATGTATTATAGCGGTTATGGGGTTCCTCGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGAT
CGTCGGTCTGGAAAGTCAGTGATAAACATCCAGGCTATAATGCTAGTGATTCAGATTCAGATGAATTGACTCGTGATTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTAGCGGAGCAACAGAGGCCTTGAATCGCGTTCCTTTATCAGAGGTTGTTTCTGATTGCGTCAAAAGATGGTTTAAGGACACTTTGAAGGAAGCCAAAGCTGG
CGATATCAACATGCAGGTCTTGGTGGGTCAAATGTATTATAGCGGTTATGGGGTTCCTCGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGAT
CGTCGGTCTGGAAAGTCAGTGATAAACATCCAGGCTATAATGCTAGTGATTCAGATTCAGATGAATTGACTCGTGATTCTTAA
Protein sequenceShow/hide protein sequence
MEISGATEALNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDELTRDS