; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy5G090900 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy5G090900
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionRibosomal protein L11
Genome locationchrH05:300519..300986
RNA-Seq ExpressionChy5G090900
SyntenyChy5G090900
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0070180 - large ribosomal subunit rRNA binding (molecular function)
InterPro domainsIPR000911 - Ribosomal protein L11/L12
IPR006519 - Ribosomal protein L11, bacterial-type
IPR020783 - Ribosomal protein L11, C-terminal
IPR020784 - Ribosomal protein L11, N-terminal
IPR020785 - Ribosomal protein L11, conserved site
IPR036769 - Ribosomal protein L11, C-terminal domain superfamily
IPR036796 - Ribosomal protein L11/L12, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034038.1 mrpl19, partial [Cucurbita argyrosperma subsp. argyrosperma]2.38e-10396.77Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
        PGHVVASTL+VKHIY+IAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV+ EL+
Subjt:  PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE

XP_004142176.1 54S ribosomal protein L19, mitochondrial [Cucumis sativus]1.75e-10599.35Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKP+TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
        PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
Subjt:  PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE

XP_008449842.1 PREDICTED: 54S ribosomal protein L19, mitochondrial [Cucumis melo]1.23e-10599.35Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
        PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
Subjt:  PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE

XP_022132985.1 54S ribosomal protein L19, mitochondrial [Momordica charantia]6.84e-10396.13Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGI+SGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
        PGHVVASTLS+KHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV+ EL+
Subjt:  PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE

XP_038901904.1 54S ribosomal protein L19, mitochondrial [Benincasa hispida]1.01e-10498.71Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
        PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV+ ELE
Subjt:  PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE

TrEMBL top hitse value%identityAlignment
A0A0A0KWT6 Uncharacterized protein4.1e-8199.35Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKP+TPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
        PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
Subjt:  PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE

A0A1S3BMZ5 54S ribosomal protein L19, mitochondrial3.1e-8199.35Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
        PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
Subjt:  PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE

A0A5A7T9U7 54S ribosomal protein L193.1e-8199.35Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
        PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
Subjt:  PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE

A0A6J1BU21 54S ribosomal protein L19, mitochondrial3.8e-7996.13Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPV+ATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGI+SGSSR
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
        PGHVVASTLS+KHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV+ EL+
Subjt:  PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE

A0A6J1IPM9 54S ribosomal protein L19, mitochondrial-like1.1e-7895.48Show/hide
Query:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR
        MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGS R
Subjt:  MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSR

Query:  PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
        PGHVVASTL++KHIY+IAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV+ EL+
Subjt:  PGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE

SwissProt top hitse value%identityAlignment
A7HWQ0 50S ribosomal protein L114.6e-2946.81Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS
        + +   I+L VPAG A P+PP+GPALGQ  LN+M FCK FNA TQK +   P+ V ITAF D +F F +K+P  +++LKKAA + SGS  PG   A T++
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS

Query:  VKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVL
        V    EIA+ K +D       L+   K I G+A SMG++V+
Subjt:  VKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVL

O67758 50S ribosomal protein L112.1e-2947.14Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS
        + V ATI L +PA  A PAPPVGPALGQ+ +N+M F K FNA ++ Y+P T + V IT ++D +F F +K+P V++ LKKAAG+E GSS P  V    ++
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS

Query:  VKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV
        VK + EIAK+K  D       L++  +++ GTA SMGI++
Subjt:  VKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV

Q07KJ7 50S ribosomal protein L112.1e-2946.43Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS
        + V   ++L VPAG A P+PP+GPALGQ  LN+M FCK+FNA+TQK + +TP+ V IT + D +F F +K+P ++++LK+AA I+SGS  PG  VA  +S
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS

Query:  VKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV
           + EIA+ K  D  C    +ES  + + G+A SMG++V
Subjt:  VKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV

Q7VRP3 50S ribosomal protein L116.0e-2943.92Show/hide
Query:  ILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVA
        ++ ++ V + I+L + A  A P+PP+GPALGQ  +N+M FCKDFN RT  ++    + V IT + D +F F +K+P+  + LKKAAGI+SGS +P  V  
Subjt:  ILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVA

Query:  STLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNEL
          + +  IYEIAK+K  D     + LES  KSI+GTA S+G++V + L
Subjt:  STLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNEL

Q9UTK2 54S ribosomal protein L19, mitochondrial2.1e-3451.85Show/hide
Query:  IRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYE
        I+L VPAG A P PP+GPALG   L  + FCK+FNART  + P+TP+   IT     TF FT+ +P  +W + K   +E GSS P H +   LS+KHIYE
Subjt:  IRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYE

Query:  IAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVL
        IAK+K +DP  Q + L S+CKS+IGTA SMG+KV+
Subjt:  IAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVL

Arabidopsis top hitse value%identityAlignment
AT1G32990.1 plastid ribosomal protein l111.1e-2242.86Show/hide
Query:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS
        + V   I+L + AG A PAPPVGPALG   +N+MAFCKD+NART   K    + V IT F D +F F +K+P  +  L KAAG+E GS  P       ++
Subjt:  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS

Query:  VKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV
        +  +  IA  K  D  C    +ES  + I GTA +MGI +
Subjt:  VKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV

AT4G35490.1 mitochondrial ribosomal protein L113.7e-7485.06Show/hide
Query:  ATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRP
        A  KEIL RRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDN+FEFTVKSP+V+WY+KKAAG++ GS+RP
Subjt:  ATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRP

Query:  GHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE
        GH+  +TLSV+H+YEIAKVKQ+DP+CQYMPLESICKSIIGTANSMGIK++ +LE
Subjt:  GHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE

AT5G51610.1 Ribosomal protein L11 family protein3.0e-0732.91Show/hide
Query:  DNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV
        D +F F +K+P  ++ L KAAG++ GS  P  +    +++  + +IA+VK  +  C    + S  ++I GTA +MGI +
Subjt:  DNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCTTGAAAGAGATTCTGACCAGACGACCCGTCGCTGCCACGATCAGGCTCACCGTCCCTGCTGGTGGAGCTCGCCCTGCGCCACCGGTGGGTCCAGCGCTTGG
TCAATACCGGCTGAATCTGATGGCTTTCTGCAAGGATTTCAATGCCCGGACTCAAAAGTACAAACCTGACACGCCCATGGCCGTAACCATTACAGCTTTCAAGGACAACA
CCTTCGAGTTCACCGTCAAATCACCGTCAGTTACTTGGTACTTGAAGAAAGCTGCTGGGATTGAATCTGGGAGCAGCCGCCCAGGCCACGTAGTCGCCTCCACGCTCTCA
GTCAAGCACATTTATGAGATCGCTAAAGTCAAGCAATCTGATCCTTATTGCCAGTACATGCCACTAGAATCCATTTGTAAGTCCATTATCGGCACTGCCAATAGCATGGG
AATTAAAGTCCTTAACGAATTGGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCTTGAAAGAGATTCTGACCAGACGACCCGTCGCTGCCACGATCAGGCTCACCGTCCCTGCTGGTGGAGCTCGCCCTGCGCCACCGGTGGGTCCAGCGCTTGG
TCAATACCGGCTGAATCTGATGGCTTTCTGCAAGGATTTCAATGCCCGGACTCAAAAGTACAAACCTGACACGCCCATGGCCGTAACCATTACAGCTTTCAAGGACAACA
CCTTCGAGTTCACCGTCAAATCACCGTCAGTTACTTGGTACTTGAAGAAAGCTGCTGGGATTGAATCTGGGAGCAGCCGCCCAGGCCACGTAGTCGCCTCCACGCTCTCA
GTCAAGCACATTTATGAGATCGCTAAAGTCAAGCAATCTGATCCTTATTGCCAGTACATGCCACTAGAATCCATTTGTAAGTCCATTATCGGCACTGCCAATAGCATGGG
AATTAAAGTCCTTAACGAATTGGAGTAA
Protein sequenceShow/hide protein sequence
MATLKEILTRRPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAFKDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLS
VKHIYEIAKVKQSDPYCQYMPLESICKSIIGTANSMGIKVLNELE