CuGenDBv2

Gene ID	Chy5G093200
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	small acidic protein 1
Genome location	chrH05:2565340..2566264
RNA-Seq Expression	Chy5G093200
Synteny	Chy5G093200
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6593800.1 Small acidic protein 2, partial [Cucurbita argyrosperma subsp. sororia]

1.69e-32

93.65

Show/hide

Query:  EMRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN
        EMR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFN FEDDFDDSDIN
Subjt:  EMRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN

KAG7026131.1 Small acidic protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.34e-32

93.65

Show/hide

Query:  EMRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN
        EMR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFN FEDDFDDSDIN
Subjt:  EMRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN

XP_004147176.1 small acidic protein 1 [Cucumis sativus]

9.10e-34

98.39

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN
        MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFN FEDDFDDSDIN
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN

XP_008460713.1 PREDICTED: small acidic protein 1 [Cucumis melo]

1.29e-33

96.77

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN
        MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFN FEDDFDDSD+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN

XP_038875245.1 small acidic protein 1 [Benincasa hispida]

1.51e-32

95.16

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN
        MR +PMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFN FEDDFDDSDIN
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LNK1 Uncharacterized protein

7.9e-24

98.39

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN
        MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFN FEDDFDDSDIN
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN

A0A1S3CCM1 small acidic protein 1

1.0e-23

96.77

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN
        MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFN FEDDFDDSD+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN

A0A5A7SMJ5 Small acidic protein 1

1.0e-23

96.77

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN
        MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFN FEDDFDDSD+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN

A0A6J1HIH2 small acidic protein 1

1.1e-22

93.55

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN
        MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFN FEDDFDDSDIN
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN

A0A6J1KE12 small acidic protein 1

1.1e-22

93.55

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN
        MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFN FEDDFDDSDIN
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN

SwissProt top hits

e value

%identity

Alignment

Q1ECS0 Small acidic protein 2

3.0e-04

45.16

Show/hide

Query:  EFFAELEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNFFEDDFDDSDIN
        +F  E+E  G ++ M    D DD  P+++  E  G+   + K  D+DFFN FEDDFDDSDIN
Subjt:  EFFAELEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNFFEDDFDDSDIN

Q9T0H2 Small acidic protein 1

1.6e-13

56.45

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN
        MR   ++  +E+++ GS++AMDVDD++ +EIL EG + ++NKLADADFFN F+DDFDD+DIN
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN

Arabidopsis top hits

e value

%identity

Alignment

AT3G24280.1 small acidic protein 2

2.1e-05

45.16

Show/hide

Query:  EFFAELEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNFFEDDFDDSDIN
        +F  E+E  G ++ M    D DD  P+++  E  G+   + K  D+DFFN FEDDFDDSDIN
Subjt:  EFFAELEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNFFEDDFDDSDIN

AT4G13520.1 small acidic protein 1

1.1e-14

56.45

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN
        MR   ++  +E+++ GS++AMDVDD++ +EIL EG + ++NKLADADFFN F+DDFDD+DIN
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCTACATATCCATGGCTTACCATGCCGAGTAACAAATTCAACCAAGTCTATTTGGATTTCATTGTTCATTTGGTTAACACAGAGATGAGATCTTCACCGATGGAGTT
CTTTGCGGAGCTGGAAGAACAGGGATCTACGGTTGCCATGGACGTCGACGATGTAGACCCACTTGAGATATTGGGCGAGGGTGTGATCTCCGCCGAGAACAAGCTCGCCG
ACGCCGATTTCTTCAACTTCTTCGAGGATGATTTTGATGACTCTGACATCAACTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MPTYPWLTMPSNKFNQVYLDFIVHLVNTEMRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNFFEDDFDDSDIN

Chy5G093200 (gene) of Cucumber (hystrix) v1 genome