; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy5G093530 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy5G093530
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionglycine-rich cell wall structural protein 1
Genome locationchrH05:3055106..3055750
RNA-Seq ExpressionChy5G093530
SyntenyChy5G093530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050716.1 hypothetical protein E6C27_scaffold560G00130 [Cucumis melo var. makuwa]3.14e-3283.23Show/hide
Query:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGGGFG--SGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGGFGKGGGVG
        MASGWKRVALLSLLCF V+VYNVVAKEDGKEEKFLFFGKSGGLGGGFG  SGFG GFGGGG GGGGGGGGGGGG  FGGGGG+GGGHGIGGGFGKGGGVG
Subjt:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGGGFG--SGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGGFGKGGGVG

Query:  GGVGGGTG--------IGKGGGLGGGAGGGFGKGGGVGGG----FGKGGGFGGGV
        GG+GGG G        IGKGGGLGGGAGGGFGKGGG+GGG    FGKGGG GGG+
Subjt:  GGVGGGTG--------IGKGGGLGGGAGGGFGKGGGVGGG----FGKGGGFGGGV

KAE8651806.1 hypothetical protein Csa_006078 [Cucumis sativus]4.64e-3284.97Show/hide
Query:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGGGFGSGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGGFGKGGGVGGG
        MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLG GFG G  SGFGGGG GGGGGGGGGGGGGGFGGG GFGGGHGIGGGFGKGGGVGGG
Subjt:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGGGFGSGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGGFGKGGGVGGG

Query:  VGGGTG--------IGKGGGLGGGAGGGFGKGGGVGGG----FGKGGGFGGGV
        VGGG G        IGKGGGLGGG+GGGFGKGGG+GGG    FGKGGG GGG+
Subjt:  VGGGTG--------IGKGGGLGGGAGGGFGKGGGVGGG----FGKGGGFGGGV

XP_016902584.1 PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo]9.74e-3564.29Show/hide
Query:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGGGFG--SGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGGFGKGGGVG
        MASGWKRVALLSLLCF V+VYNVVAKEDGKEEKFLFFGKSGGLGGGFG  SGFG GFGGGG GGGGGGGGGGGG  FGGGGG+GGGHGIGGGFGKGGGVG
Subjt:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGGGFG--SGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGGFGKGGGVG

Query:  GGVGGGTG-----------------------------------------------------------------------------IGKGGGLGGGAGGGF
        GG+GGG G                                                                             IGKGGG GGGAGGGF
Subjt:  GGVGGGTG-----------------------------------------------------------------------------IGKGGGLGGGAGGGF

Query:  GKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGG-FGKGGGFGGGFGKGFGGGIGGGSGGGFGGGFGGGGGGGFGGGGGFGGGGIGHH
        GKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGG FGKGGGFG GFG GFGGG+GGG            GGGGFGGGGGFGGGGIGHH
Subjt:  GKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGG-FGKGGGFGGGFGKGFGGGIGGGSGGGFGGGFGGGGGGGFGGGGGFGGGGIGHH

XP_031737441.1 LOW QUALITY PROTEIN: glycine-rich cell wall structural protein [Cucumis sativus]6.98e-3284.97Show/hide
Query:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGGGFGSGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGGFGKGGGVGGG
        MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLG GFG G  SGFGGGG GGGGGGGGGGGGGGFGGG GFGGGHGIGGGFGKGGGVGGG
Subjt:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGGGFGSGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGGFGKGGGVGGG

Query:  VGGGTG--------IGKGGGLGGGAGGGFGKGGGVGGG----FGKGGGFGGGV
        VGGG G        IGKGGGLGGG+GGGFGKGGG+GGG    FGKGGG GGG+
Subjt:  VGGGTG--------IGKGGGLGGGAGGGFGKGGGVGGG----FGKGGGFGGGV

XP_038906570.1 glycine-rich cell wall structural protein isoform X1 [Benincasa hispida]6.47e-2473.1Show/hide
Query:  MASGWKRVALLSLLCFQVIVY--NVVAKEDGKEEKFLFFGKSGGLGGGFGSGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGG--------
        MASG+KRVALLSLLCF VIVY  NVVAKEDGKEEKFLFFGKSGGLGGGFG G G GFGGGG  GGGGG GGGGG G G GGGFGGGHGIGGG        
Subjt:  MASGWKRVALLSLLCFQVIVY--NVVAKEDGKEEKFLFFGKSGGLGGGFGSGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGG--------

Query:  ------------FGKGGGVGGGVGGGTG--------IGKGGGLGGGAGGGFGKGGGVGGGFGKGGGFGGGV
                    FGKGGG+GGGVGGG G        IGKGGGLGGGAGGGFGKGGG GGGFGKGGG GGG+
Subjt:  ------------FGKGGGVGGGVGGGTG--------IGKGGGLGGGAGGGFGKGGGVGGGFGKGGGFGGGV

TrEMBL top hitse value%identityAlignment
A0A0A0LIH7 Uncharacterized protein8.0e-3573.19Show/hide
Query:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGGGFGSGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGGFGKGGGVGGG
        MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLG GFG   GSGFGGGG GGGGGGGGGGGGGGFGGG GFGGGHGIGGGFGKGGGVGGG
Subjt:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGGGFGSGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGGFGKGGGVGGG

Query:  VGGGT------------------------------------------------------------GIGKGGGL--GGGAGGGFGKGGGVGGGFGKGGGFG
        VGGG                                                             GIGKGGGL  GGGAGGGFGKGGGVGGGFGKGGGFG
Subjt:  VGGGT------------------------------------------------------------GIGKGGGL--GGGAGGGFGKGGGVGGGFGKGGGFG

Query:  GGVGGGAGGGGGGGGGGGGGGGGFGKGGGFGGGFGKGFGGGIGGGSGGGFGGGFGGGGGGGFGGGGGFGGGGIGHH
        GGVGGGAGGGGGGGGGGGGGGGGFG GGGFGGGFGKGFGGGIGGGSG GFGGG   GGGGGFGGGGGFGGGGIGHH
Subjt:  GGVGGGAGGGGGGGGGGGGGGGGFGKGGGFGGGFGKGFGGGIGGGSGGGFGGGFGGGGGGGFGGGGGFGGGGIGHH

A0A1S4E2X3 glycine-rich cell wall structural protein 12.3e-2668.93Show/hide
Query:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGGGFGSGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGGFGKGGGVGGG
        MASGWKRVALLSLLCF V+VYNVVAKEDGKEEKFLFFGKSGGLGGGFG G G G G GG GGGGGGGGGGGGGGFGGGGG+GGGHGIGGGFGKGGGVGGG
Subjt:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGGGFGSGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGGFGKGGGVGGG

Query:  VGGGT--------GIGKGGGLGGGAGGGFGKGGGV----GGGFGKGGGFGGGV-------------GGGAGGG-----------GGGGGGGGGGGGGFGK
        +GGG         GIGKGGGLGGGAGGGFGKGGG+    GGGFGKGGG GGG+             GGGAGGG           G GGG GGG GGGFGK
Subjt:  VGGGT--------GIGKGGGLGGGAGGGFGKGGGV----GGGFGKGGGFGGGV-------------GGGAGGG-----------GGGGGGGGGGGGGFGK

Query:  GGGFGGGFGK--GFGGGIGGGSGG----------------------------GFGGGFGGGGGGGFGGGGGFGGGGIGHH
        GGG GGGFGK  GFGGG+GGG+GG                            GFGGG GGGGGGGFGGGGGFGGGGIGHH
Subjt:  GGGFGGGFGK--GFGGGIGGGSGG----------------------------GFGGGFGGGGGGGFGGGGGFGGGGIGHH

A0A5D3BTN6 Uncharacterized protein8.6e-2177.63Show/hide
Query:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGGGFGSGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGGFGKGGGVGGG
        MASGWKRVALLSLLCF V+VYNVVAKEDGKEEKFLFFGKSGGLGGGFG G G G G GG GGGGGGGGGGGGGGFGGGGG+GGGHGIGGGFGKGGGVGGG
Subjt:  MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGGGFGSGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGGFGKGGGVGGG

Query:  VGGGT--------GIGKGGGLGGGAGGGFGKGGGV----GGGFGKGGGFGGGV--GGGAGGGGGGGGG---GGGGGGGFGKGGGFGGGFGKGFGGGIGGG
        +GGG         GIGKGGGLGGGAGGGFGKGGG+    GGGFGKGGG GGG+  GGG GGG G GGG   GGG GGG GKGGG GGG G G G G GGG
Subjt:  VGGGT--------GIGKGGGLGGGAGGGFGKGGGV----GGGFGKGGGFGGGV--GGGAGGGGGGGGG---GGGGGGGFGKGGGFGGGFGKGFGGGIGGG

Query:  SGGGF--GGGFGGGGGGGFGGGGGFGGG
         GGG   GGG GGG GGG G GGG GGG
Subjt:  SGGGF--GGGFGGGGGGGFGGGGGFGGG

A0A6J1KUW9 glycine-rich cell wall structural protein-like isoform X136.2e-1173.18Show/hide
Query:  MASGWKRVALLSLLCFQVIVYNVVAKE--DGKEEKFLFFGKSGGLGGGFGSGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGGFGKGGGVG
        MA+G  RVALLS LCF V+V +VVAKE  +G+EEKFLFFGKSGGLG GFG       GG G GGG GGGGGGGGGG GGGGGFGGG GIG G G GGG G
Subjt:  MASGWKRVALLSLLCFQVIVYNVVAKE--DGKEEKFLFFGKSGGLGGGFGSGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGGFGKGGGVG

Query:  GGVGGGTGIGKGGGLGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAG---------GGGGGGGGGGGGGGGFGKGGGFGGGFGKGFGGGIGGGSGGGFG
        GGVGGG G GKGGGLGGGAGGGFGKGGG+GGG GKGGG GGGVGGGAG         GGG GGG GGG GGG GKGGG GGG+GKG G G G G GGG G
Subjt:  GGVGGGTGIGKGGGLGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAG---------GGGGGGGGGGGGGGGFGKGGGFGGGFGKGFGGGIGGGSGGGFG

Query:  GGFGGGGGGGFGGGGGFGGG
        GG GGG GGGFG GGG GGG
Subjt:  GGFGGGGGGGFGGGGGFGGG

A0A6J1KWQ9 glycine-rich cell wall structural protein-like isoform X75.2e-1072.57Show/hide
Query:  MASGWKRVALLSLLCFQVIVYNVVAKE--DGKEEKFLFFGKSGGLGGGFGSGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGGFGKGGGVG
        MA+G  RVALLS LCF V+V +VVAKE  +G+EEKFLFFGKSGGLG GFG       GG G GGG GGGGGGGGGG GGGGGFGGG GIG G G GGG G
Subjt:  MASGWKRVALLSLLCFQVIVYNVVAKE--DGKEEKFLFFGKSGGLGGGFGSGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGGFGKGGGVG

Query:  GGVGGGTGIGKGGGLGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAG---------GGGGGGGGGGGGGGGFGKGGGFGGGFGK--GFGGGI--GGGSG
        GGVGGG G GKGGGLGGGAGGGFGKGGG+GGG GKGGG GGGVGGGAG         GGG GGG GGG GGG GKGGG GGG+GK  G GGGI  GGG G
Subjt:  GGVGGGTGIGKGGGLGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAG---------GGGGGGGGGGGGGGGFGKGGGFGGGFGK--GFGGGI--GGGSG

Query:  GGFGGGF--GGGGGGGFGGGGGFGGG
        GG GGGF  GGG GGG+G GGG GGG
Subjt:  GGFGGGF--GGGGGGGFGGGGGFGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTGGTTGGAAGAGAGTGGCTTTGTTATCTTTGTTGTGTTTTCAAGTTATTGTGTACAATGTGGTTGCCAAGGAAGATGGAAAGGAAGAGAAGTTTCTGTTCTT
TGGTAAGAGTGGTGGACTAGGGGGTGGATTTGGGAGTGGATTTGGGAGTGGTTTTGGAGGAGGTGGCAGCGGCGGTGGTGGCGGCGGTGGCGGCGGCGGCGGTGGCGGAG
GTTTTGGAGGTGGTGGAGGATTTGGAGGAGGTCACGGAATTGGTGGTGGATTTGGTAAAGGTGGTGGTGTTGGTGGTGGAGTAGGAGGAGGCACTGGCATTGGAAAAGGT
GGAGGACTAGGTGGCGGTGCAGGAGGAGGGTTTGGTAAGGGTGGTGGAGTTGGAGGAGGGTTCGGTAAGGGCGGTGGATTTGGTGGTGGAGTAGGAGGCGGTGCTGGTGG
TGGCGGTGGAGGCGGCGGCGGAGGTGGAGGCGGTGGGGGTGGGTTTGGAAAAGGTGGAGGTTTTGGTGGTGGCTTTGGAAAAGGTTTTGGAGGAGGAATAGGTGGTGGCT
CAGGTGGTGGATTTGGAGGCGGGTTCGGTGGAGGTGGTGGAGGAGGCTTTGGTGGCGGTGGCGGATTTGGTGGAGGCGGAATTGGACACCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTGGTTGGAAGAGAGTGGCTTTGTTATCTTTGTTGTGTTTTCAAGTTATTGTGTACAATGTGGTTGCCAAGGAAGATGGAAAGGAAGAGAAGTTTCTGTTCTT
TGGTAAGAGTGGTGGACTAGGGGGTGGATTTGGGAGTGGATTTGGGAGTGGTTTTGGAGGAGGTGGCAGCGGCGGTGGTGGCGGCGGTGGCGGCGGCGGCGGTGGCGGAG
GTTTTGGAGGTGGTGGAGGATTTGGAGGAGGTCACGGAATTGGTGGTGGATTTGGTAAAGGTGGTGGTGTTGGTGGTGGAGTAGGAGGAGGCACTGGCATTGGAAAAGGT
GGAGGACTAGGTGGCGGTGCAGGAGGAGGGTTTGGTAAGGGTGGTGGAGTTGGAGGAGGGTTCGGTAAGGGCGGTGGATTTGGTGGTGGAGTAGGAGGCGGTGCTGGTGG
TGGCGGTGGAGGCGGCGGCGGAGGTGGAGGCGGTGGGGGTGGGTTTGGAAAAGGTGGAGGTTTTGGTGGTGGCTTTGGAAAAGGTTTTGGAGGAGGAATAGGTGGTGGCT
CAGGTGGTGGATTTGGAGGCGGGTTCGGTGGAGGTGGTGGAGGAGGCTTTGGTGGCGGTGGCGGATTTGGTGGAGGCGGAATTGGACACCACTAA
Protein sequenceShow/hide protein sequence
MASGWKRVALLSLLCFQVIVYNVVAKEDGKEEKFLFFGKSGGLGGGFGSGFGSGFGGGGSGGGGGGGGGGGGGGFGGGGGFGGGHGIGGGFGKGGGVGGGVGGGTGIGKG
GGLGGGAGGGFGKGGGVGGGFGKGGGFGGGVGGGAGGGGGGGGGGGGGGGGFGKGGGFGGGFGKGFGGGIGGGSGGGFGGGFGGGGGGGFGGGGGFGGGGIGHH