; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy5G093890 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy5G093890
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionC2H2-type domain-containing protein
Genome locationchrH05:3548910..3549443
RNA-Seq ExpressionChy5G093890
SyntenyChy5G093890
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61620.1 hypothetical protein Csa_006775 [Cucumis sativus]5.35e-11894.97Show/hide
Query:  MDSDQKLEISNCSESSSDDQLEQSEATTKEDHDH--HSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS
        MDSDQKLEISNCS+SSSDDQLEQ EATTKEDHDH  H+YSDNFN+IIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS
Subjt:  MDSDQKLEISNCSESSSDDQLEQSEATTKEDHDH--HSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS

Query:  NNQIIGPSTFTNIPYFGPLLGKSQVNYQASTSNLHGDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHHHM
        NNQIIGPSTF NIPYFGPLLG+SQVNYQASTSNLHGDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHHH+
Subjt:  NNQIIGPSTFTNIPYFGPLLGKSQVNYQASTSNLHGDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHHHM

XP_022930490.1 probable transcriptional regulator RABBIT EARS [Cucurbita moschata]1.65e-3650Show/hide
Query:  ISNCSESSSDDQLEQSEATTKEDHDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTF
        + + SESSS    EQS+   ++D      SD+F    +KRSY CIFCKRGFTNAQALGGHMNIHRKDR NK  + +          S    ++ I PSTF
Subjt:  ISNCSESSSDDQLEQSEATTKEDHDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTF

Query:  TNIPYFGPLLGKSQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH
         N P F PLL  S+V+Y  S SN  G        NMN WG+DLSL+I  + GRR +W+ G+G+DLELRLGH+
Subjt:  TNIPYFGPLLGKSQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH

XP_023000554.1 zinc finger protein GIS-like [Cucurbita maxima]8.89e-3952.02Show/hide
Query:  ISNCSESSSDDQLEQSEATTKEDHDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPK-TSFSFSSSSSSSSLQSNNQIIGPST
        +S+ SESSS+   EQS+   ++D      SD+F    +KRSY CIFCKRGFTNAQALGGHMNIHRKDR NK  +  SF   S  S            PST
Subjt:  ISNCSESSSDDQLEQSEATTKEDHDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPK-TSFSFSSSSSSSSLQSNNQIIGPST

Query:  FTNIPYFGPLLGKSQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH
        F + P F PLL  S+V+Y+AS SN  G      + NMNLWG DLSL+I  + GRR +W+ G+G+DLELRLGH+
Subjt:  FTNIPYFGPLLGKSQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH

XP_023514446.1 probable transcriptional regulator RABBIT EARS [Cucurbita pepo subsp. pepo]1.65e-3650Show/hide
Query:  ISNCSESSSDDQLEQSEATTKEDHDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTF
        + + SESSS+   EQS+   ++D      SD+F    +KRSY CIFCKRGFTNAQALGGHMNIHRKDR NK  + +          S    ++ I PSTF
Subjt:  ISNCSESSSDDQLEQSEATTKEDHDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTF

Query:  TNIPYFGPLLGKSQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH
         N   F PLL  S+V+Y  S SN  G        NMNLWG DLSL+I  + GRR +W+ G+G+DLELRLGH+
Subjt:  TNIPYFGPLLGKSQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH

XP_038875027.1 zinc finger protein 6-like [Benincasa hispida]1.29e-7474.59Show/hide
Query:  MDSDQKLEISNCSESSSDDQLEQSEATTKEDHDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNN
        MDSDQKL  S+CSESSS+  LEQSE   ++D     YSD+F N IIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPK        SSSSSLQSN 
Subjt:  MDSDQKLEISNCSESSSDDQLEQSEATTKEDHDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNN

Query:  QIIGPST-FTNIPYFGPLLGKSQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH
        QI+GPST F +IPYFGPLLG+SQVNYQAS+SN HG       FNMNLWGSDLSLQIG T GRR+LWN GDGVDLELRLGHH
Subjt:  QIIGPST-FTNIPYFGPLLGKSQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH

TrEMBL top hitse value%identityAlignment
A0A0A0LI91 C2H2-type domain-containing protein1.1e-9094.97Show/hide
Query:  MDSDQKLEISNCSESSSDDQLEQSEATTKE--DHDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS
        MDSDQKLEISNCS+SSSDDQLEQ EATTKE  DHDHH+YSDNFN+IIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS
Subjt:  MDSDQKLEISNCSESSSDDQLEQSEATTKE--DHDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQS

Query:  NNQIIGPSTFTNIPYFGPLLGKSQVNYQASTSNLHGDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHHHM
        NNQIIGPSTF NIPYFGPLLG+SQVNYQASTSNLHGDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHHH+
Subjt:  NNQIIGPSTFTNIPYFGPLLGKSQVNYQASTSNLHGDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHHHM

A0A6J1CE07 transcriptional regulator TAC1-like3.9e-2749.73Show/hide
Query:  MDSDQKLEISNCSESSSDDQLEQSEATTKEDHDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNN
        MDS++ L   + S+SSS++Q  +SEA  K D ++         +  KRSY CIFCKRGFTNAQALGGHMNIHRKDR NKP + + S SS SSSS + S  
Subjt:  MDSDQKLEISNCSESSSDDQLEQSEATTKEDHDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNN

Query:  QIIGPSTFTNIPYFGPLLGKSQVNYQASTSNLHGD-------HFNMNLWGSDLSLQIGSTNGRRR---LW-NNGDGVDLELRLGHHH
          I  S F N  YF    G+ +V+++ S SN  G        +    LWGSDLSLQI  + GR R   +W NNG+G+DLELRLGH H
Subjt:  QIIGPSTFTNIPYFGPLLGKSQVNYQASTSNLHGD-------HFNMNLWGSDLSLQIGSTNGRRR---LW-NNGDGVDLELRLGHHH

A0A6J1EX07 probable transcriptional regulator RABBIT EARS4.6e-2851.11Show/hide
Query:  MDSDQKLEISNCSESSSDDQLEQSEATTKEDHDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNN
        MDS+   ++ + SESSS    EQS+   ++D      SD+F    +KRSY CIFCKRGFTNAQALGGHMNIHRKDR NK  K   SF   S         
Subjt:  MDSDQKLEISNCSESSSDDQLEQSEATTKEDHDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNN

Query:  QIIGPSTFTNIPYFGPLLGKSQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH
          I PSTF N P F PLL  S+V+Y  S SN  G        NMN WG+DLSL+I  + GRR +W +G+G+DLELRLGH+
Subjt:  QIIGPSTFTNIPYFGPLLGKSQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH

A0A6J1IWL0 zinc finger protein 11-like1.6e-2045.14Show/hide
Query:  SESSSDDQLEQSEATTKEDHDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGP-STFTNI
        S+SSSD   E      ++ H HH    + +N   KR YEC FCKRGFTNAQALGGHMNIHRKDR  KP   +F+ SSSSS     SN+Q+  P ST  NI
Subjt:  SESSSDDQLEQSEATTKEDHDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGP-STFTNI

Query:  PYFGP----------LLGKSQVNYQASTSNLHGDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHHH
        PY+ P              +  N+            N  L G++LSLQI  T G   +W N + VDLELRLGH +
Subjt:  PYFGP----------LLGKSQVNYQASTSNLHGDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHHH

A0A6J1KKB3 zinc finger protein GIS-like6.4e-3052.22Show/hide
Query:  MDSDQKLEISNCSESSSDDQLEQSEATTKEDHDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNN
        MDS+   ++S+ SESSS+   EQS+   ++D      SD+F    +KRSY CIFCKRGFTNAQALGGHMNIHRKDR NK  K   SF   S  S      
Subjt:  MDSDQKLEISNCSESSSDDQLEQSEATTKEDHDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNN

Query:  QIIGPSTFTNIPYFGPLLGKSQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH
            PSTF + P F PLL  S+V+Y+AS SN  G      + NMNLWG DLSL+I  + GRR +W +G+G+DLELRLGH+
Subjt:  QIIGPSTFTNIPYFGPLLGKSQVNYQASTSNLHG-----DHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHH

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 102.1e-0652.83Show/hide
Query:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPN-KPPKTSFSFSSSSSSSSLQSN
        RSY C FC+R F +AQALGGHMN+HR+DR   K     + F  SSSS    S+
Subjt:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPN-KPPKTSFSFSSSSSSSSLQSN

Q38895 Transcriptional regulator SUPERMAN1.6e-0650.77Show/hide
Query:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTFTNIP
        RSY C FCKR F +AQALGGHMN+HR+DR     + S    SSSS+ S    N     ST  N P
Subjt:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTFTNIP

Q9LHS9 Probable transcriptional regulator RABBIT EARS4.0e-0548.15Show/hide
Query:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQ
        RSY C FC R F +AQALGGHMN+HR+DR  +  + S S SS+  ++  + + Q
Subjt:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQ

Q9SLB8 Zinc finger protein 111.1e-0543.08Show/hide
Query:  RSYECIFCKRGFTNAQALGGHMNIHRKDR-----------------PNKPPKTSFSFSSSSSSSS
        ++Y C FC+R F +AQALGGHMN+HR+DR                 P   P  +FS SSSSS+++
Subjt:  RSYECIFCKRGFTNAQALGGHMNIHRKDR-----------------PNKPPKTSFSFSSSSSSSS

Q9SR34 Transcriptional regulator TAC19.6e-0732.9Show/hide
Query:  HDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDR---------PNKPPKTSFSFSSSSSSSSLQSNNQIIGPS-TFTNIPYF--GPLLG
        + H    D+ N     RSY C FC RGF+NAQALGGHMNIHR+DR          NK    + S +S   S  L    Q  G + T  +   +    +  
Subjt:  HDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDR---------PNKPPKTSFSFSSSSSSSSLQSNNQIIGPS-TFTNIPYF--GPLLG

Query:  KSQVNYQASTSNLH-GDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLG
        K ++ +    S L   DH  +    ++ S+   S++  R +    + +DLELRLG
Subjt:  KSQVNYQASTSNLH-GDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLG

Arabidopsis top hitse value%identityAlignment
AT3G09290.1 telomerase activator16.8e-0832.9Show/hide
Query:  HDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDR---------PNKPPKTSFSFSSSSSSSSLQSNNQIIGPS-TFTNIPYF--GPLLG
        + H    D+ N     RSY C FC RGF+NAQALGGHMNIHR+DR          NK    + S +S   S  L    Q  G + T  +   +    +  
Subjt:  HDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDR---------PNKPPKTSFSFSSSSSSSSLQSNNQIIGPS-TFTNIPYF--GPLLG

Query:  KSQVNYQASTSNLH-GDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLG
        K ++ +    S L   DH  +    ++ S+   S++  R +    + +DLELRLG
Subjt:  KSQVNYQASTSNLH-GDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLG

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein1.2e-0750.77Show/hide
Query:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTFTNIP
        RSY C FCKR F +AQALGGHMN+HR+DR     + S    SSSS+ S    N     ST  N P
Subjt:  RSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTFTNIP

AT3G23140.1 C2H2 and C2HC zinc fingers superfamily protein1.1e-1041.41Show/hide
Query:  KRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPST-FTNIPYFGPLLGKSQVNYQASTSNLHGDHFNMNLWGSD
        +R+Y+C  CKRGFTN QALGGH NIHR++R   P   S S SS S   SL   +Q    ST FTN P + P +      +Q S   ++  H N   +GS 
Subjt:  KRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPST-FTNIPYFGPLLGKSQVNYQASTSNLHGDHFNMNLWGSD

Query:  LSLQIGSTNGRRRLWNNGDGVDLELRLG
         S    S  G R  +  G   DL L LG
Subjt:  LSLQIGSTNGRRRLWNNGDGVDLELRLG

AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein2.8e-0934.75Show/hide
Query:  DHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTFTNIPYFGPLLGKSQVNYQASTSNL
        D  SYS + +     R Y C FC+RGF+NAQALGGHMNIHRKDR  K  + +     S  +    S N+         +P+F   +G  +      +   
Subjt:  DHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGPSTFTNIPYFGPLLGKSQVNYQASTSNL

Query:  HGDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLG
         GD    N+      LQ       + L  + D +DLELRLG
Subjt:  HGDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLG

AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein2.3e-1152.38Show/hide
Query:  QLEQSEATTKEDHD---HHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNK
        + E+S ++T  +     H   S +  + + +R YEC FCKRGFTNAQALGGHMNIHR+DR NK
Subjt:  QLEQSEATTKEDHD---HHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAGATCAAAAATTAGAAATCAGCAACTGTTCAGAGAGTTCAAGTGATGATCAATTAGAACAATCAGAAGCAACAACAAAGGAAGATCATGATCATCAT
AGTTATTCAGATAATTTCAACAATATTATTATTAAACGTTCATATGAGTGTATTTTTTGCAAACGTGGATTCACCAATGCTCAAGCTCTTGGAGGCCATATGAAT
ATTCATAGAAAAGATAGACCAAATAAACCTCCAAAAACCTCTTTTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCACTTCAAAGTAATAATCAAATAATTGGTCCA
TCCACTTTCACCAATATCCCCTATTTTGGGCCTCTTTTGGGTAAGTCTCAAGTGAATTATCAAGCATCAACTTCTAACCTACACGGAGATCACTTTAATATGAAC
CTTTGGGGGTCAGATTTGAGCTTACAGATTGGATCGACCAACGGGAGGAGGCGACTTTGGAATAATGGTGATGGTGTTGATTTGGAGCTTCGACTTGGTCATCAT
CATATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCAGATCAAAAATTAGAAATCAGCAACTGTTCAGAGAGTTCAAGTGATGATCAATTAGAACAATCAGAAGCAACAACAAAGGAAGATCATGATCATCAT
AGTTATTCAGATAATTTCAACAATATTATTATTAAACGTTCATATGAGTGTATTTTTTGCAAACGTGGATTCACCAATGCTCAAGCTCTTGGAGGCCATATGAAT
ATTCATAGAAAAGATAGACCAAATAAACCTCCAAAAACCTCTTTTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCACTTCAAAGTAATAATCAAATAATTGGTCCA
TCCACTTTCACCAATATCCCCTATTTTGGGCCTCTTTTGGGTAAGTCTCAAGTGAATTATCAAGCATCAACTTCTAACCTACACGGAGATCACTTTAATATGAAC
CTTTGGGGGTCAGATTTGAGCTTACAGATTGGATCGACCAACGGGAGGAGGCGACTTTGGAATAATGGTGATGGTGTTGATTTGGAGCTTCGACTTGGTCATCAT
CATATGTAA
Protein sequenceShow/hide protein sequence
MDSDQKLEISNCSESSSDDQLEQSEATTKEDHDHHSYSDNFNNIIIKRSYECIFCKRGFTNAQALGGHMNIHRKDRPNKPPKTSFSFSSSSSSSSLQSNNQIIGP
STFTNIPYFGPLLGKSQVNYQASTSNLHGDHFNMNLWGSDLSLQIGSTNGRRRLWNNGDGVDLELRLGHHHM