; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy5G094800 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy5G094800
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionchloroplast stem-loop binding protein of 41 kDa
Genome locationchrH05:4707020..4712256
RNA-Seq ExpressionChy5G094800
SyntenyChy5G094800
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0005829 - cytosol (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR001509 - NAD-dependent epimerase/dehydratase
IPR036291 - NAD(P)-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140080.1 chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cucumis sativus]1.03e-24399.4Show/hide
Query:  VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT
        VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT
Subjt:  VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT

Query:  VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT
        VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWA+FRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT
Subjt:  VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT

Query:  NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL
        NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL
Subjt:  NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL

Query:  KERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA
        KERFEEYVKIGRDKK IKFELDDKILESLNVPVAA
Subjt:  KERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA

XP_008449375.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cucumis melo]6.47e-23596.42Show/hide
Query:  VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT
        VRASSS KKKVLIVNTNSGGHAVIGFYFAK+LLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKV+EGASFDVVLDNNGKDIDT
Subjt:  VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT

Query:  VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT
        VRPVIDWAKSSGVKQFLFISSAGIYK TDEPPHVEGD VKADAGHVGVEKY+AEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT
Subjt:  VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT

Query:  NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL
        NIAHVRDLSSMLTLAVEKPDEAHSNIFNCV+ RAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGW+ TTNLPEDL
Subjt:  NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL

Query:  KERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA
        KERFEEYVKIGRDKK IKFELDDKILESL VPVAA
Subjt:  KERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA

XP_022963688.1 chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cucurbita moschata]1.19e-22993.73Show/hide
Query:  VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT
        VRASS+ KK VLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGE+SSDKM KPPFNRFSEIVS GGKTVWGDPAE+GKVV GASFDVVLDNNGKDID+
Subjt:  VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT

Query:  VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT
        VRPVIDWAKSSGVKQFLFISSAGIYK TDEPPHVEGD VKADAGHVGVE+YIAEVFSSWA+FRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT
Subjt:  VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT

Query:  NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL
        NI+HVRDLSSMLTLAVEKPDEAH+NIFNCVS RAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGW+ +TNLPEDL
Subjt:  NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL

Query:  KERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA
        KERFEEYVKIGRDKK IKFELDDKILESL VPVAA
Subjt:  KERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA

XP_022967430.1 chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Cucurbita maxima]2.40e-22993.73Show/hide
Query:  VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT
        VRASS+ KK VLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGE+SSDKM KPPFNRFSEIVS GGKTVWGDPAE+GKVV GASFDVVLDNNGKDID+
Subjt:  VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT

Query:  VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT
        VRPVIDWAKSSGVKQFLFISSAGIYK TDEPPHVEGD VKADAGHVGVE+YIAEVFSSWA+FRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT
Subjt:  VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT

Query:  NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL
        NIAHVRDLSSMLTLAVEKPDEAH+NIFNCVS RAVTLDGMAKLCAQAAGRPVNIVHYDPK VGVDAKKAFPFRNMHFYAEPRAAQEILGW+ +TNLPEDL
Subjt:  NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL

Query:  KERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA
        KERFEEYVKIGRDKK IKFELDDKILESL VPVAA
Subjt:  KERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA

XP_038888331.1 chloroplast stem-loop binding protein of 41 kDa a, chloroplastic-like [Benincasa hispida]5.75e-23294.93Show/hide
Query:  VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT
        VRA+S  KKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGE+SSDKM KPPFNRFSEIVSGGGKTVWGDPAEIGKVV GASFDVVLDNNGKDIDT
Subjt:  VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT

Query:  VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT
        VRPVIDWAKSSGVKQFLFISSAGIYK TDEPPHVEGD VKADAGHVGVEKYIAEVF SWAIFRPQYMIGSGNNKDCEEWFFDRIVR+RP+PIPGSGMQLT
Subjt:  VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT

Query:  NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL
        NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVS RAVTLDGMAKLCAQAAGRPV+IVH+DPKAVGVDAKKAFPFRNMHFYAEPRAAQ+ILGW+GTTNLPEDL
Subjt:  NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL

Query:  KERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA
        KERFEEYVKIGRDKKPIKFELDDKILESL VPVAA
Subjt:  KERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA

TrEMBL top hitse value%identityAlignment
A0A0A0KE82 Epimerase domain-containing protein7.3e-19499.4Show/hide
Query:  VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT
        VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT
Subjt:  VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT

Query:  VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT
        VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWA+FRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT
Subjt:  VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT

Query:  NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL
        NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL
Subjt:  NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL

Query:  KERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA
        KERFEEYVKIGRDKK IKFELDDKILESLNVPVAA
Subjt:  KERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA

A0A1S3BLW3 chloroplast stem-loop binding protein of 41 kDa a, chloroplastic3.9e-18796.42Show/hide
Query:  VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT
        VRASSS KKKVLIVNTNSGGHAVIGFYFAK+LLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKV+EGASFDVVLDNNGKDIDT
Subjt:  VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT

Query:  VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT
        VRPVIDWAKSSGVKQFLFISSAGIYK TDEPPHVEGD VKADAGHVGVEKY+AEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT
Subjt:  VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT

Query:  NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL
        NIAHVRDLSSMLTLAVEKPDEAHSNIFNCV+ RAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGW+ TTNLPEDL
Subjt:  NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL

Query:  KERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA
        KERFEEYVKIGRDKK IKFELDDKILESL VPVAA
Subjt:  KERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA

A0A5D3E2H3 Chloroplast stem-loop binding protein of 41 kDa a3.9e-18796.42Show/hide
Query:  VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT
        VRASSS KKKVLIVNTNSGGHAVIGFYFAK+LLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKV+EGASFDVVLDNNGKDIDT
Subjt:  VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT

Query:  VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT
        VRPVIDWAKSSGVKQFLFISSAGIYK TDEPPHVEGD VKADAGHVGVEKY+AEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT
Subjt:  VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT

Query:  NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL
        NIAHVRDLSSMLTLAVEKPDEAHSNIFNCV+ RAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGW+ TTNLPEDL
Subjt:  NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL

Query:  KERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA
        KERFEEYVKIGRDKK IKFELDDKILESL VPVAA
Subjt:  KERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA

A0A6J1HIM8 chloroplast stem-loop binding protein of 41 kDa a, chloroplastic4.4e-18393.73Show/hide
Query:  VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT
        VRASS+ KK VLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGE+SSDKM KPPFNRFSEIVS GGKTVWGDPAE+GKVV GASFDVVLDNNGKDID+
Subjt:  VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT

Query:  VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT
        VRPVIDWAKSSGVKQFLFISSAGIYK TDEPPHVEGD VKADAGHVGVE+YIAEVFSSWA+FRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT
Subjt:  VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT

Query:  NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL
        NI+HVRDLSSMLTLAVEKPDEAH+NIFNCVS RAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGW+ +TNLPEDL
Subjt:  NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL

Query:  KERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA
        KERFEEYVKIGRDKK IKFELDDKILESL VPVAA
Subjt:  KERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA

A0A6J1HUG4 chloroplast stem-loop binding protein of 41 kDa a, chloroplastic7.6e-18393.73Show/hide
Query:  VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT
        VRASS+ KK VLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGE+SSDKM KPPFNRFSEIVS GGKTVWGDPAE+GKVV GASFDVVLDNNGKDID+
Subjt:  VRASSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDT

Query:  VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT
        VRPVIDWAKSSGVKQFLFISSAGIYK TDEPPHVEGD VKADAGHVGVE+YIAEVFSSWA+FRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT
Subjt:  VRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLT

Query:  NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL
        NIAHVRDLSSMLTLAVEKPDEAH+NIFNCVS RAVTLDGMAKLCAQAAGRPVNIVHYDPK VGVDAKKAFPFRNMHFYAEPRAAQEILGW+ +TNLPEDL
Subjt:  NIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDL

Query:  KERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA
        KERFEEYVKIGRDKK IKFELDDKILESL VPVAA
Subjt:  KERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA

SwissProt top hitse value%identityAlignment
P09147 UDP-glucose 4-epimerase6.5e-0622.89Show/hide
Query:  SGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGK---TVWGD---PAEIGKVVEGASFDVVLDNNG----------------
        +GG   IG +   QLL +GH+V IL       D +     +    I   GGK    V GD    A + +++   + D V+   G                
Subjt:  SGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGK---TVWGD---PAEIGKVVEGASFDVVLDNNG----------------

Query:  KDIDTVRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVF--------SSWAI-----FRPQYMIGSGNNKDCEEWFFD
         +++    +I   +++ VK F+F SSA +Y    + P+VE  P        G  K + E            W+I     F P     SG+  +  +   +
Subjt:  KDIDTVRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVF--------SSWAI-----FRPQYMIGSGNNKDCEEWFFD

Query:  RIV---------RDRPIPIPGS------GMQLTNIAHVRDLSSMLTLAVEK-PDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDA
         ++         R   + I G+      G  + +  HV DL+    +A+EK  ++   +I+N  +G   ++  +    ++A G+PVN  H+ P+  G   
Subjt:  RIV---------RDRPIPIPGS------GMQLTNIAHVRDLSSMLTLAVEK-PDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDA

Query:  KKAFPFRNMHFYAEPRAAQEILGWEGTTNLPE
            P     ++A+   A   L W  T  L E
Subjt:  KKAFPFRNMHFYAEPRAAQEILGWEGTTNLPE

Q9LYA9 Chloroplast stem-loop binding protein of 41 kDa a, chloroplastic9.9e-16482.14Show/hide
Query:  VRASS-SPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDID
        V+ASS   KK VLIVNTNSGGHAVIGFYFAK+LL +GH VTILTVG++SS+KM KPPFNRFSEIVSGGGKTVWG+PA +  VV G +FDVVLDNNGKD+D
Subjt:  VRASS-SPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDID

Query:  TVRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQL
        TVRPV+DWAKSSGVKQFLFISSAGIYK+T++PPHVEGD VKADAGHV VEKY+AE F +WA FRPQYMIGSGNNKDCEEWFFDRIVRDR +PIPGSG+QL
Subjt:  TVRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQL

Query:  TNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPED
        TNI+HVRDLSSMLT AV  P+ A  NIFNCVS RAVTLDGMAKLCA AAG+ V IVHYDPKA+GVDAKKAF FRNMHFYAEPRAA+++LGWE  TNLPED
Subjt:  TNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPED

Query:  LKERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA
        LKERFEEYVKIGRDKK IKFELDDKILE+L  PVAA
Subjt:  LKERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA

Q9SA52 Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic6.2e-4936.45Show/hide
Query:  SSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKM----NKPPFNRF-SEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDI
        S+S +KK+LI+    GG   IG + ++ L+  GH+VT+ T G+    K     +   F  F S+I+   G     D  +     EG  FDVV D NG++ 
Subjt:  SSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKM----NKPPFNRF-SEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDI

Query:  DTVRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVG---VEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGS
        + V P+++      ++Q+++ SSAG+Y  +D  PH E D V   + H G    E  +     +W   RP Y+ G  N    EEWFF R+   RPIP+P S
Subjt:  DTVRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVG---VEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGS

Query:  GMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRP-VNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTT
        G+Q++ + HV+DL++   L V   ++A   IFN    + VT DG+AK CA+A G P   IVHY+PK      KKAFPFR+ HF+A    A+ +LGW+   
Subjt:  GMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRP-VNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTT

Query:  NLPEDLKERFEEYVKIGRDKKPIKFELDDKIL
        +L E L + +      G  +K   F  DD IL
Subjt:  NLPEDLKERFEEYVKIGRDKKPIKFELDDKIL

Arabidopsis top hitse value%identityAlignment
AT1G09340.1 chloroplast RNA binding4.4e-5036.45Show/hide
Query:  SSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKM----NKPPFNRF-SEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDI
        S+S +KK+LI+    GG   IG + ++ L+  GH+VT+ T G+    K     +   F  F S+I+   G     D  +     EG  FDVV D NG++ 
Subjt:  SSSPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKM----NKPPFNRF-SEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDI

Query:  DTVRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVG---VEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGS
        + V P+++      ++Q+++ SSAG+Y  +D  PH E D V   + H G    E  +     +W   RP Y+ G  N    EEWFF R+   RPIP+P S
Subjt:  DTVRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVG---VEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGS

Query:  GMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRP-VNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTT
        G+Q++ + HV+DL++   L V   ++A   IFN    + VT DG+AK CA+A G P   IVHY+PK      KKAFPFR+ HF+A    A+ +LGW+   
Subjt:  GMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRP-VNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTT

Query:  NLPEDLKERFEEYVKIGRDKKPIKFELDDKIL
        +L E L + +      G  +K   F  DD IL
Subjt:  NLPEDLKERFEEYVKIGRDKKPIKFELDDKIL

AT3G63140.1 chloroplast stem-loop binding protein of 41 kDa7.1e-16582.14Show/hide
Query:  VRASS-SPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDID
        V+ASS   KK VLIVNTNSGGHAVIGFYFAK+LL +GH VTILTVG++SS+KM KPPFNRFSEIVSGGGKTVWG+PA +  VV G +FDVVLDNNGKD+D
Subjt:  VRASS-SPKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDID

Query:  TVRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQL
        TVRPV+DWAKSSGVKQFLFISSAGIYK+T++PPHVEGD VKADAGHV VEKY+AE F +WA FRPQYMIGSGNNKDCEEWFFDRIVRDR +PIPGSG+QL
Subjt:  TVRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKADAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQL

Query:  TNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPED
        TNI+HVRDLSSMLT AV  P+ A  NIFNCVS RAVTLDGMAKLCA AAG+ V IVHYDPKA+GVDAKKAF FRNMHFYAEPRAA+++LGWE  TNLPED
Subjt:  TNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRPVNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPED

Query:  LKERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA
        LKERFEEYVKIGRDKK IKFELDDKILE+L  PVAA
Subjt:  LKERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTATTGAAAAGACACTTAAAAACAATACAAAAACATATAGATCAAAGGTTGCAACTGAAAATATGTATGAGTTTGTTATTGAGAAGAGACGAACAAAACGAACCAAAAA
TATTTTAGAGAATGCAAAAAAGTCCAAACAAGACCCAAAAAAAAAAGTGTCTCCAAGCAAGGCTACAAGGCAGTCTCCAAGGTGGAATGATGATGCTCCAAACTTTGTAC
TTAAAATATTACAAATCGTTAGGGCTAGCTCTTCTCCCAAGAAGAAGGTGTTGATTGTCAACACAAACAGCGGTGGGCATGCTGTCATTGGCTTCTATTTTGCTAAACAG
CTTCTGGGTTCTGGCCATGAAGTCACGATTCTCACTGTCGGTGAACAGAGTTCTGATAAGATGAACAAACCCCCTTTCAACAGATTCTCTGAAATTGTGAGTGGTGGAGG
CAAGACCGTATGGGGAGATCCAGCCGAAATTGGGAAGGTTGTGGAAGGAGCATCATTTGATGTGGTATTAGATAACAATGGCAAGGACATTGATACTGTGAGGCCTGTTA
TTGATTGGGCAAAGAGCTCTGGTGTGAAGCAGTTTCTATTTATCAGCAGTGCTGGAATTTATAAGACAACTGATGAGCCTCCCCATGTTGAAGGGGATCCTGTTAAAGCT
GACGCTGGTCATGTTGGTGTTGAGAAATATATTGCAGAGGTTTTCAGCAGCTGGGCTATCTTCCGTCCACAGTACATGATTGGATCTGGCAACAACAAAGATTGTGAAGA
GTGGTTCTTTGACAGAATTGTCCGGGACAGACCGATTCCAATACCAGGCTCTGGTATGCAGCTGACAAACATCGCACATGTCAGGGACTTGTCTTCCATGTTAACACTAG
CTGTAGAGAAGCCGGATGAAGCACACTCTAACATATTCAACTGTGTAAGCGGTCGGGCTGTGACTCTTGATGGAATGGCCAAGCTATGTGCTCAAGCAGCAGGTCGTCCT
GTTAACATAGTGCATTATGATCCAAAAGCAGTCGGGGTTGATGCAAAGAAAGCTTTTCCTTTCAGGAATATGCATTTCTATGCAGAACCAAGAGCAGCCCAGGAGATTTT
AGGGTGGGAAGGTACCACAAATCTTCCTGAAGATTTGAAGGAACGATTTGAAGAGTATGTGAAGATTGGTAGAGACAAGAAACCTATTAAGTTTGAATTAGATGATAAGA
TACTTGAGTCCTTAAACGTTCCAGTAGCTGCTTAA
mRNA sequenceShow/hide mRNA sequence
GTTATTGAAAAGACACTTAAAAACAATACAAAAACATATAGATCAAAGGTTGCAACTGAAAATATGTATGAGTTTGTTATTGAGAAGAGACGAACAAAACGAACCAAAAA
TATTTTAGAGAATGCAAAAAAGTCCAAACAAGACCCAAAAAAAAAAGTGTCTCCAAGCAAGGCTACAAGGCAGTCTCCAAGGTGGAATGATGATGCTCCAAACTTTGTAC
TTAAAATATTACAAATCGTTAGGGCTAGCTCTTCTCCCAAGAAGAAGGTGTTGATTGTCAACACAAACAGCGGTGGGCATGCTGTCATTGGCTTCTATTTTGCTAAACAG
CTTCTGGGTTCTGGCCATGAAGTCACGATTCTCACTGTCGGTGAACAGAGTTCTGATAAGATGAACAAACCCCCTTTCAACAGATTCTCTGAAATTGTGAGTGGTGGAGG
CAAGACCGTATGGGGAGATCCAGCCGAAATTGGGAAGGTTGTGGAAGGAGCATCATTTGATGTGGTATTAGATAACAATGGCAAGGACATTGATACTGTGAGGCCTGTTA
TTGATTGGGCAAAGAGCTCTGGTGTGAAGCAGTTTCTATTTATCAGCAGTGCTGGAATTTATAAGACAACTGATGAGCCTCCCCATGTTGAAGGGGATCCTGTTAAAGCT
GACGCTGGTCATGTTGGTGTTGAGAAATATATTGCAGAGGTTTTCAGCAGCTGGGCTATCTTCCGTCCACAGTACATGATTGGATCTGGCAACAACAAAGATTGTGAAGA
GTGGTTCTTTGACAGAATTGTCCGGGACAGACCGATTCCAATACCAGGCTCTGGTATGCAGCTGACAAACATCGCACATGTCAGGGACTTGTCTTCCATGTTAACACTAG
CTGTAGAGAAGCCGGATGAAGCACACTCTAACATATTCAACTGTGTAAGCGGTCGGGCTGTGACTCTTGATGGAATGGCCAAGCTATGTGCTCAAGCAGCAGGTCGTCCT
GTTAACATAGTGCATTATGATCCAAAAGCAGTCGGGGTTGATGCAAAGAAAGCTTTTCCTTTCAGGAATATGCATTTCTATGCAGAACCAAGAGCAGCCCAGGAGATTTT
AGGGTGGGAAGGTACCACAAATCTTCCTGAAGATTTGAAGGAACGATTTGAAGAGTATGTGAAGATTGGTAGAGACAAGAAACCTATTAAGTTTGAATTAGATGATAAGA
TACTTGAGTCCTTAAACGTTCCAGTAGCTGCTTAA
Protein sequenceShow/hide protein sequence
VIEKTLKNNTKTYRSKVATENMYEFVIEKRRTKRTKNILENAKKSKQDPKKKVSPSKATRQSPRWNDDAPNFVLKILQIVRASSSPKKKVLIVNTNSGGHAVIGFYFAKQ
LLGSGHEVTILTVGEQSSDKMNKPPFNRFSEIVSGGGKTVWGDPAEIGKVVEGASFDVVLDNNGKDIDTVRPVIDWAKSSGVKQFLFISSAGIYKTTDEPPHVEGDPVKA
DAGHVGVEKYIAEVFSSWAIFRPQYMIGSGNNKDCEEWFFDRIVRDRPIPIPGSGMQLTNIAHVRDLSSMLTLAVEKPDEAHSNIFNCVSGRAVTLDGMAKLCAQAAGRP
VNIVHYDPKAVGVDAKKAFPFRNMHFYAEPRAAQEILGWEGTTNLPEDLKERFEEYVKIGRDKKPIKFELDDKILESLNVPVAA