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Chy5G095530 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy5G095530
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionTCP transcription factor
Genome locationchrH05:5549017..5550106
RNA-Seq ExpressionChy5G095530
SyntenyChy5G095530
Gene Ontology termsGO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR005333 - Transcription factor, TCP
IPR017887 - Transcription factor TCP subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589264.1 Transcription factor TCP10, partial [Cucurbita argyrosperma subsp. sororia]3.25e-2959.63Show/hide
Query:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANGFTTQISKHKETESSEFGSELQLQSAIGNFVPPLDSLFPMSFATTFANFLGYLVNLKIMRST
        Q++LGYD PSKAVDWLIKKA+ AIDKLRELP Y PIANGF     K  ETE+   G    LQSA+G+F P L+  FP + ATT  NF GY V+L I+  T
Subjt:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANGFTTQISKHKETESSEFGSELQLQSAIGNFVPPLDSLFPMSFATTFANFLGYLVNLKIMRST

Query:  DPTIDPALS
        DP  D ALS
Subjt:  DPTIDPALS

XP_022930891.1 transcription factor TCP10-like [Cucurbita moschata]6.45e-2960.36Show/hide
Query:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANGFT--TQISKHKETESSEFGSELQLQSAIGNFVPPLDSLFPMSFATTFANFLGYLVNLKIMR
        Q++LGYD PSKAVDWLIKKA+ AIDKLRELP Y PIANGF    Q +   ETESSE      LQSA+G+F P L+  FP + ATT  NF GY V+L I+ 
Subjt:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANGFT--TQISKHKETESSEFGSELQLQSAIGNFVPPLDSLFPMSFATTFANFLGYLVNLKIMR

Query:  STDPTIDPALS
         TDP  D ALS
Subjt:  STDPTIDPALS

XP_022989259.1 transcription factor TCP10-like [Cucurbita maxima]7.09e-2858.56Show/hide
Query:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANGFTTQISK--HKETESSEFGSELQLQSAIGNFVPPLDSLFPMSFATTFANFLGYLVNLKIMR
        Q++LGYD PSKAVDWLIKKA+ AIDKLRELP Y PIA+GF     K   +ETES+E      LQSA+G+F P L+  FP + ATT  NF GY V+L I+ 
Subjt:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANGFTTQISK--HKETESSEFGSELQLQSAIGNFVPPLDSLFPMSFATTFANFLGYLVNLKIMR

Query:  STDPTIDPALS
         TDP  D ALS
Subjt:  STDPTIDPALS

XP_023529225.1 transcription factor TCP10-like [Cucurbita pepo subsp. pepo]1.41e-2759.46Show/hide
Query:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANGFTTQISK--HKETESSEFGSELQLQSAIGNFVPPLDSLFPMSFATTFANFLGYLVNLKIMR
        Q++LGYD PSKAVDWLIKKA+ AIDKLRELP Y PIANGF     K    ETESSE      LQSA+G+F P L+  FP + ATT  NF GY V+L I+ 
Subjt:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANGFTTQISK--HKETESSEFGSELQLQSAIGNFVPPLDSLFPMSFATTFANFLGYLVNLKIMR

Query:  STDPTIDPALS
         T P  D ALS
Subjt:  STDPTIDPALS

XP_038877605.1 transcription factor TCP10-like [Benincasa hispida]4.80e-3967.89Show/hide
Query:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANGFTTQISKHKETESSEFGSELQLQSAIGNFVPPLDSLFPMSFATTFANFLGYLVNLKIMRST
        Q+RLGYD PSKAVDWLIKKA+ AIDKL+ELP YFPI +G T    K  ET+S EFG +LQLQSA GNF PP +SLFPMS AT   NF GY VNL I R T
Subjt:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANGFTTQISKHKETESSEFGSELQLQSAIGNFVPPLDSLFPMSFATTFANFLGYLVNLKIMRST

Query:  DPTIDPALS
        DP  D ALS
Subjt:  DPTIDPALS

TrEMBL top hitse value%identityAlignment
A0A2C9UKB3 TCP domain-containing protein6.8e-1241.22Show/hide
Query:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANGFTTQISKHKETESSEF---------GSELQLQ-------SAIGNFVPP------LDSLFPM
        Q+RLGYD PSKAVDWLI+KA+ AIDKL ELP + P AN     +   +   SSE          G   QL        S   +F+ P      + SLFP 
Subjt:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANGFTTQISKHKETESSEF---------GSELQLQ-------SAIGNFVPP------LDSLFPM

Query:  SFATTFANFLGYLVNLKIMRSTDPTIDPALS
        S  T+  NF GY +++ I R+T+ T D  LS
Subjt:  SFATTFANFLGYLVNLKIMRSTDPTIDPALS

A0A2C9UT11 TCP domain-containing protein6.8e-1241.98Show/hide
Query:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIA-----------NGFTTQISKHKETESSEFGSELQLQ-----SAIGNFV-PPLD-----SLFPM
        Q+RLGYD PSKAVDWLIKKA+ AIDKL ELP + P A           N  +++++  +++ESS +  +L  Q     S   +F+ PP+D     SLFP 
Subjt:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIA-----------NGFTTQISKHKETESSEFGSELQLQ-----SAIGNFV-PPLD-----SLFPM

Query:  SFATTFANFLGYLVNLKIMRSTDPTIDPALS
        S  T+  NF GY   + I R+T+ + D  LS
Subjt:  SFATTFANFLGYLVNLKIMRSTDPTIDPALS

A0A2I4EXZ1 transcription factor TCP4-like1.5e-1140Show/hide
Query:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIA-----------NGFTTQISKHKETESSEFGSELQLQSA-----IGNFVPP----------LDS
        Q+RLGYD PSKAVDWLIKKA+ AID L ELP + P             +G T +++  +++ESS +  +L  Q A        F+PP          L S
Subjt:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIA-----------NGFTTQISKHKETESSEFGSELQLQSA-----IGNFVPP----------LDS

Query:  LFPMSFATTFANFLGYLVNLKIMRSTDPTIDPALS
        LFP S AT+  NF  Y  ++   R+++PT D  LS
Subjt:  LFPMSFATTFANFLGYLVNLKIMRSTDPTIDPALS

A0A6J1ES58 transcription factor TCP10-like5.0e-2360.36Show/hide
Query:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANGFT--TQISKHKETESSEFGSELQLQSAIGNFVPPLDSLFPMSFATTFANFLGYLVNLKIMR
        Q++LGYD PSKAVDWLIKKA+ AIDKLRELP Y PIANGF    Q +   ETESSE      LQSA+G+F P L+  FP + ATT  NF GY V+L I+ 
Subjt:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANGFT--TQISKHKETESSEFGSELQLQSAIGNFVPPLDSLFPMSFATTFANFLGYLVNLKIMR

Query:  STDPTIDPALS
         TDP  D ALS
Subjt:  STDPTIDPALS

A0A6J1JNV1 transcription factor TCP10-like3.3e-2258.56Show/hide
Query:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANGFTTQISK--HKETESSEFGSELQLQSAIGNFVPPLDSLFPMSFATTFANFLGYLVNLKIMR
        Q++LGYD PSKAVDWLIKKA+ AIDKLRELP Y PIA+GF     K   +ETES+E      LQSA+G+F P L+  FP + ATT  NF GY V+L I+ 
Subjt:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANGFTTQISK--HKETESSEFGSELQLQSAIGNFVPPLDSLFPMSFATTFANFLGYLVNLKIMR

Query:  STDPTIDPALS
         TDP  D ALS
Subjt:  STDPTIDPALS

SwissProt top hitse value%identityAlignment
A2WM14 Transcription factor PCF57.5e-0869.23Show/hide
Query:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANG
        Q+RLGYD PSKAVDWLIK A+ AIDKL  LP++ P A G
Subjt:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANG

O82277 Transcription factor TCP109.2e-0685.19Show/hide
Query:  QNRLGYDCPSKAVDWLIKKARIAIDKL
        Q+RLGYD PSKAVDWLIKKA+ AIDKL
Subjt:  QNRLGYDCPSKAVDWLIKKARIAIDKL

Q8LPR5 Transcription factor TCP46.4e-0768.57Show/hide
Query:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFP
        Q+RLG+D PSKAVDWLIKKA+ +ID+L ELP + P
Subjt:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFP

Q8LT07 Transcription factor PCF57.5e-0869.23Show/hide
Query:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANG
        Q+RLGYD PSKAVDWLIK A+ AIDKL  LP++ P A G
Subjt:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANG

Q9MAH8 Transcription factor TCP37.0e-0665.71Show/hide
Query:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFP
        Q+RLG+D PSKAVDWLI KA+ AID L +LP + P
Subjt:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFP

Arabidopsis top hitse value%identityAlignment
AT1G53230.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 35.0e-0765.71Show/hide
Query:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFP
        Q+RLG+D PSKAVDWLI KA+ AID L +LP + P
Subjt:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFP

AT2G31070.1 TCP domain protein 106.5e-0785.19Show/hide
Query:  QNRLGYDCPSKAVDWLIKKARIAIDKL
        Q+RLGYD PSKAVDWLIKKA+ AIDKL
Subjt:  QNRLGYDCPSKAVDWLIKKARIAIDKL

AT3G15030.1 TCP family transcription factor 44.5e-0868.57Show/hide
Query:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFP
        Q+RLG+D PSKAVDWLIKKA+ +ID+L ELP + P
Subjt:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFP

AT3G15030.2 TCP family transcription factor 44.5e-0868.57Show/hide
Query:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFP
        Q+RLG+D PSKAVDWLIKKA+ +ID+L ELP + P
Subjt:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFP

AT3G15030.3 TCP family transcription factor 44.5e-0868.57Show/hide
Query:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFP
        Q+RLG+D PSKAVDWLIKKA+ +ID+L ELP + P
Subjt:  QNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGCCAATCATGTTTCACAGAATCGATTGGGTTACGATTGTCCCAGTAAAGCTGTAGATTGGCTAATTAAGAAGGCTAGAATTGCCATTGATAAGCTTCGAGAACT
TCCATCTTATTTTCCCATAGCCAATGGGTTCACGACACAAATCTCAAAACACAAGGAAACAGAGTCCTCTGAATTTGGTTCCGAGTTGCAGTTGCAATCCGCCATTGGAA
ACTTCGTTCCACCACTTGATTCTTTGTTTCCTATGAGCTTTGCCACCACGTTCGCCAATTTTTTGGGCTACCTGGTGAATTTGAAAATTATGAGATCCACTGACCCAACT
ATAGATCCCGCCCTCTCTCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAACGCCAATCATGTTTCACAGAATCGATTGGGTTACGATTGTCCCAGTAAAGCTGTAGATTGGCTAATTAAGAAGGCTAGAATTGCCATTGATAAGCTTCGAGAACT
TCCATCTTATTTTCCCATAGCCAATGGGTTCACGACACAAATCTCAAAACACAAGGAAACAGAGTCCTCTGAATTTGGTTCCGAGTTGCAGTTGCAATCCGCCATTGGAA
ACTTCGTTCCACCACTTGATTCTTTGTTTCCTATGAGCTTTGCCACCACGTTCGCCAATTTTTTGGGCTACCTGGTGAATTTGAAAATTATGAGATCCACTGACCCAACT
ATAGATCCCGCCCTCTCTCCATAA
Protein sequenceShow/hide protein sequence
MNANHVSQNRLGYDCPSKAVDWLIKKARIAIDKLRELPSYFPIANGFTTQISKHKETESSEFGSELQLQSAIGNFVPPLDSLFPMSFATTFANFLGYLVNLKIMRSTDPT
IDPALSP