CuGenDBv2

Gene ID	Chy5G096590
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Calcium-binding protein CML
Genome location	chrH05:7432419..7432835
RNA-Seq Expression	Chy5G096590
Synteny	Chy5G096590
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008457185.1 PREDICTED: uncharacterized protein LOC103496924 [Cucumis melo]

3.03e-88

95.71

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Query:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKGC-GNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQ
        MEDTNTLAADCIVICCCCQCLALQIILLLLLKLP KLVRKTREFAKKRL MREKEEKMVGKEKGC GNE+RGISNGSCMRNEEKGLGLSCCMEEIEKVMQ
Subjt:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKGC-GNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQ

Query:  DLHEKGEFGFGSFWGNGNTSSGSCRDDLFSPTNVQYQLIQ
        DLHEKGEFGFGSFWGNGNT SGSCRD+LFSPTNVQYQLIQ
Subjt:  DLHEKGEFGFGSFWGNGNTSSGSCRDDLFSPTNVQYQLIQ

XP_011649060.1 uncharacterized protein LOC105434576 [Cucumis sativus]

3.86e-93

97.84

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Query:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQD
        MED NTLAADCIVICCCCQCLALQIILLL LKLPWKLVRKTREFAKKRLR+REKEEKMVGKEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQD
Subjt:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQD

Query:  LHEKGEFGFGSFWGNGNTSSGSCRDDLFSPTNVQYQLIQ
        LHEKGEFGFGSFWGNGNTSSGSCRDDLFSPTNVQYQLIQ
Subjt:  LHEKGEFGFGSFWGNGNTSSGSCRDDLFSPTNVQYQLIQ

XP_022928895.1 uncharacterized protein LOC111435666 [Cucurbita moschata]

2.12e-69

81.56

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Query:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQD
        MED NTLAADCIVICCCCQCLAL I+LLLLLKLP KLVRKTR+FAK+RLRMREKEEKMV ++     EVRGISNGSCMR+EE GLGLSCCMEEIE+VMQD
Subjt:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQD

Query:  LHEKGEFGFGSFWGN-GNTSSGSCRDDL-FSPTNVQYQLIQ
        LHEKGEFGFGSFWG  GN+ SGSCRD+  F PT+VQYQLIQ
Subjt:  LHEKGEFGFGSFWGN-GNTSSGSCRDDL-FSPTNVQYQLIQ

XP_023551308.1 uncharacterized protein LOC111809163 [Cucurbita pepo subsp. pepo]

1.45e-69

81.56

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Query:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQD
        MED NTLAADCIVICCCCQCLAL I+LLLLLKLP KLVRKTR+FAK+RLRMREKEEKMV ++     EVRGISNGSCMR+EE GLGLSCCMEEIE+VMQD
Subjt:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQD

Query:  LHEKGEFGFGSFWGN-GNTSSGSCRDDL-FSPTNVQYQLIQ
        LHEKGEFGFGSFWG  GN+ SGSCRD+  F+PT+VQYQLIQ
Subjt:  LHEKGEFGFGSFWGN-GNTSSGSCRDDL-FSPTNVQYQLIQ

XP_038874336.1 uncharacterized protein LOC120067034 [Benincasa hispida]

7.01e-76

85.21

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Query:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKGCG--NEVRGISNGSCMRNEEKGLGLSCCMEEIEKVM
        MEDTNTLAADCIVICCCCQCLALQI+LLLLLKLPWKLVRKTREFAK+RLRMREKEEKMVGKEKG    ++++GISNG CMR+EE GLGLSC MEEIEKVM
Subjt:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKGCG--NEVRGISNGSCMRNEEKGLGLSCCMEEIEKVM

Query:  QDLHEKGEFGFGSFWGNGNTSSGSCRDDL-FSPTNVQYQLIQ
        QDLHEKGEFGFGSFWG+GN+ SGSCRD+  +SPTNVQYQLIQ
Subjt:  QDLHEKGEFGFGSFWGNGNTSSGSCRDDL-FSPTNVQYQLIQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LKX5 Uncharacterized protein

1.0e-70

97.84

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Query:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQD
        MED NTLAADCIVICCCCQCLALQIILLL LKLPWKLVRKTREFAKKRLR+REKEEKMVGKEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQD
Subjt:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQD

Query:  LHEKGEFGFGSFWGNGNTSSGSCRDDLFSPTNVQYQLIQ
        LHEKGEFGFGSFWGNGNTSSGSCRDDLFSPTNVQYQLIQ
Subjt:  LHEKGEFGFGSFWGNGNTSSGSCRDDLFSPTNVQYQLIQ

A0A1S3C4I0 uncharacterized protein LOC103496924

5.1e-67

95.71

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Query:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKG-CGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQ
        MEDTNTLAADCIVICCCCQCLALQIILLLLLKLP KLVRKTREFAKKRL MREKEEKMVGKEKG CGNE+RGISNGSCMRNEEKGLGLSCCMEEIEKVMQ
Subjt:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKG-CGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQ

Query:  DLHEKGEFGFGSFWGNGNTSSGSCRDDLFSPTNVQYQLIQ
        DLHEKGEFGFGSFWGNGNT SGSCRD+LFSPTNVQYQLIQ
Subjt:  DLHEKGEFGFGSFWGNGNTSSGSCRDDLFSPTNVQYQLIQ

A0A5D3B961 Uncharacterized protein

5.1e-67

95.71

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Query:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKG-CGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQ
        MEDTNTLAADCIVICCCCQCLALQIILLLLLKLP KLVRKTREFAKKRL MREKEEKMVGKEKG CGNE+RGISNGSCMRNEEKGLGLSCCMEEIEKVMQ
Subjt:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKG-CGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQ

Query:  DLHEKGEFGFGSFWGNGNTSSGSCRDDLFSPTNVQYQLIQ
        DLHEKGEFGFGSFWGNGNT SGSCRD+LFSPTNVQYQLIQ
Subjt:  DLHEKGEFGFGSFWGNGNTSSGSCRDDLFSPTNVQYQLIQ

A0A6J1ESS6 uncharacterized protein LOC111435666

1.2e-52

81.56

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Query:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQD
        MED NTLAADCIVICCCCQCLAL I+LLLLLKLP KLVRKTR+FAK+RLRMREKEEKMV ++     EVRGISNGSCMR+EE GLGLSCCMEEIE+VMQD
Subjt:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQD

Query:  LHEKGEFGFGSFWG-NGNTSSGSCRD-DLFSPTNVQYQLIQ
        LHEKGEFGFGSFWG  GN+ SGSCRD + F PT+VQYQLIQ
Subjt:  LHEKGEFGFGSFWG-NGNTSSGSCRD-DLFSPTNVQYQLIQ

A0A6J1HXD6 uncharacterized protein LOC111468906

1.8e-51

80.14

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Query:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQD
        MED NTLAADCIVICCCCQCLAL I+LLLLLKLP KLVRKTR+FAK+RLRMREKEEKMV ++     EVRG SNG CMR+EE GLGLSCCMEEIE+VMQD
Subjt:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQD

Query:  LHEKGEFGFGSFWG-NGNTSSGSCRD-DLFSPTNVQYQLIQ
        LHEKGEFGFGSFWG  GN+ SGSCRD + F+PT+VQYQLIQ
Subjt:  LHEKGEFGFGSFWG-NGNTSSGSCRD-DLFSPTNVQYQLIQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G26140.1 unknown protein

1.5e-10

34.45

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Query:  EDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRL-RMREKEEKMVGKEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQD
        ED    AADC+V+ CCCQCL LQ+ + +  K+P KL +K ++F K+   +  +   + V +E   GN              E+G   S C E+I++++Q+
Subjt:  EDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRL-RMREKEEKMVGKEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQD

Query:  LHEKGEFGFGSFWGNGNTS
        L     F FGSFW + ++S
Subjt:  LHEKGEFGFGSFWGNGNTS

AT1G68700.1 unknown protein

1.9e-05

42.11

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Query:  EEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNTSSGSCRDDLFSPTNVQYQL
        EE G  +S CME++E+++Q+L  KGEF FGSFW  G++++       F   N QY++
Subjt:  EEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNTSSGSCRDDLFSPTNVQYQL

AT3G25597.1 unknown protein

1.0e-14

36.3

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Query:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTRE-FAKKRLRMREKEEKMVGK-EKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVM
        MED N  AADC+V+ CCC CL LQI + + L LP KLV+ TR+ + K  +  R K   +  +  +    +         M  E +G G   C+EE+E+V+
Subjt:  MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTRE-FAKKRLRMREKEEKMVGK-EKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVM

Query:  QDLHEKGEFGFGSFWG----NGNTSSGSCRDDLFSPTNV-QYQLIQ
        ++  + GEF FGSFWG      ++S  +C +D F    V +Y++I+
Subjt:  QDLHEKGEFGFGSFWG----NGNTSSGSCRDDLFSPTNV-QYQLIQ

Sequences

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CDS sequence

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ATGGAAGACACGAACACACTAGCAGCCGACTGCATTGTCATATGCTGTTGCTGTCAATGCCTGGCGTTGCAGATCATTCTCCTTTTGTTACTCAAGCTTCCATGGAAACT
CGTTCGAAAGACAAGAGAGTTTGCAAAGAAAAGGCTGAGAATGAGAGAAAAAGAGGAGAAGATGGTAGGGAAAGAAAAGGGTTGTGGAAATGAGGTTAGAGGAATTAGTA
ATGGAAGTTGTATGAGAAATGAAGAAAAGGGATTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAAGGTTATGCAGGATTTGCATGAGAAAGGAGAGTTTGGTTTTGGA
AGCTTTTGGGGAAATGGTAATACAAGTTCAGGTTCCTGCAGAGATGATCTGTTTAGTCCTACAAATGTACAGTATCAATTAATTCAA

mRNA sequence

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Protein sequence

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MEDTNTLAADCIVICCCCQCLALQIILLLLLKLPWKLVRKTREFAKKRLRMREKEEKMVGKEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFG
SFWGNGNTSSGSCRDDLFSPTNVQYQLIQ

Chy5G096590 (gene) of Cucumber (hystrix) v1 genome