CuGenDBv2

Gene ID	Chy5G097660
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A2
Genome location	chrH05:9662946..9663409
RNA-Seq Expression	Chy5G097660
Synteny	Chy5G097660
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0009507 - chloroplast (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0034357 - photosynthetic membrane (cellular component) GO:0016491 - oxidoreductase activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0051536 - iron-sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

ABK55706.1 chloroplast photosystem I P700 apoprotein A2, partial [Cucumis sativus]

6.49e-73

76.43

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Query:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
        MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE                             WQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
Subjt:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA

Query:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL
        VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGD Y   L
Subjt:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL

KAF3492780.1 hypothetical protein DY000_02056643 [Brassica cretica]

4.34e-72

73.61

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Query:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
        MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE                             WQGNFE W+QDPLHVRPIAHAIWDPHFGQPA
Subjt:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA

Query:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVLNKIK
        VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTN D Y    NK K
Subjt:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVLNKIK

KYP77018.1 Photosystem I P700 chlorophyll a apoprotein A2 [Cajanus cajan]

5.69e-72

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Query:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
        MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE                             WQGNFEAWVQDPLHVRPIAHAIW+PHFGQPA
Subjt:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA

Query:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL
        +EAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGD Y   L
Subjt:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL

WP_197493682.1 hypothetical protein, partial [Paenarthrobacter nicotinovorans]

4.29e-71

75.71

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Query:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
        MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE                             WQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
Subjt:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA

Query:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL
        VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTN D Y   L
Subjt:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL

WP_202958869.1 hypothetical protein [Solirubrobacter sp. CPCC 204708]

5.09e-71

77.21

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Query:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
        MALRFPRFSQGLAQDPT RRIWFGIATAHDFESHDDITEE                             WQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
Subjt:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA

Query:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSY
        VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGD Y
Subjt:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSY

TrEMBL top hits

e value

%identity

Alignment

A0A6M8YK46 Photosystem I P700 chlorophyll a apoprotein A2

1.8e-55

76.43

Show/hide

Query:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
        MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE                             WQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
Subjt:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA

Query:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL
        VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGD Y+  L
Subjt:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL

A0A7M3UZV2 Photosystem I P700 chlorophyll a apoprotein A2

1.8e-55

76.43

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Query:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
        MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE                             WQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
Subjt:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA

Query:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL
        VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGD Y+  L
Subjt:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL

A0A7T6C2I7 Photosystem I P700 apoprotein A2

1.8e-55

76.43

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Query:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
        MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE                             WQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
Subjt:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA

Query:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL
        VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGD Y+  L
Subjt:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL

D3WES1 Photosystem I P700 chlorophyll a apoprotein A2

1.8e-55

76.43

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Query:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
        MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE                             WQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
Subjt:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA

Query:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL
        VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGD Y+  L
Subjt:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL

K4K804 Photosystem I (Fragment)

1.4e-55

77.14

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Query:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
        MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE                             WQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
Subjt:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA

Query:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL
        VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGD YV  L
Subjt:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL

SwissProt top hits

e value

%identity

Alignment

P58385 Photosystem I P700 chlorophyll a apoprotein A2

2.5e-57

77.94

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Query:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
        MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE                             WQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
Subjt:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA

Query:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSY
        VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGD Y
Subjt:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSY

Q09X18 Photosystem I P700 chlorophyll a apoprotein A2

2.5e-57

77.94

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Query:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
        MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE                             WQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
Subjt:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA

Query:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSY
        VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGD Y
Subjt:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSY

Q2PMU2 Photosystem I P700 chlorophyll a apoprotein A2

1.1e-57

76.43

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Query:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
        MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE                             WQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
Subjt:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA

Query:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL
        VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGD Y   L
Subjt:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL

Q49KZ9 Photosystem I P700 chlorophyll a apoprotein A2

9.4e-57

75.71

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Query:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
        MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE                             WQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
Subjt:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA

Query:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL
        VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTN D Y   L
Subjt:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL

Q4VZN4 Photosystem I P700 chlorophyll a apoprotein A2

1.1e-57

76.43

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Query:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
        MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE                             WQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
Subjt:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA

Query:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL
        VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGD Y   L
Subjt:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

1.9e-57

Show/hide

Query:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA
        MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE                             WQGNFE WVQDPLHVRPIAHAIWDPHFGQPA
Subjt:  MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEE----------------------------PWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPA

Query:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL
        VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTN D Y   L
Subjt:  VEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVL

ATCG00350.1 Photosystem I, PsaA/PsaB protein

3.7e-08

30.15

Show/hide

Query:  FSQGLAQDP-TTRRIWFGIATAHDFESHDDITEE-----------------PWQ----------GNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRG
        FS+ +A+ P TT  IW   A AHDF+SH    EE                  W            N+EAW+ DP H+ P A  +W P  GQ  +     G
Subjt:  FSQGLAQDP-TTRRIWFGIATAHDFESHDDITEE-----------------PWQ----------GNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRG

Query:  GALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVLNKI
        G  G + I  SG +Q W   G+ +    Y   +  +
Subjt:  GALGPVNIAYSGVYQWWYTIGLRTNGDSYVRVLNKI

Sequences

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CDS sequence

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ATGGCACTAAGATTTCCAAGGTTTAGCCAAGGCTTAGCTCAGGACCCCACTACTCGTCGTATTTGGTTTGGTATTGCTACCGCGCATGATTTCGAAAGTCATGATGATAT
TACTGAAGAACCTTGGCAAGGAAATTTTGAAGCATGGGTACAGGACCCTTTACATGTAAGACCTATTGCTCATGCAATTTGGGATCCTCATTTTGGTCAACCGGCCGTCG
AAGCTTTTACTCGAGGTGGTGCTCTTGGCCCAGTGAATATCGCTTATTCTGGTGTTTATCAGTGGTGGTATACAATCGGTTTACGCACTAATGGGGACAGTTATGTAAGA
GTTTTGAATAAGATTAAATGTAGAAACTATGAATTATCACTCAATATATGA

mRNA sequence

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Protein sequence

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MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEEPWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDSYVR
VLNKIKCRNYELSLNI

Chy5G097660 (gene) of Cucumber (hystrix) v1 genome