; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy5G097790 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy5G097790
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptionphotosystem I reaction center subunit IV, chloroplastic-like
Genome locationchrH05:10010759..10011544
RNA-Seq ExpressionChy5G097790
SyntenyChy5G097790
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009538 - photosystem I reaction center (cellular component)
InterPro domainsIPR003375 - Photosystem I PsaE, reaction centre subunit IV
IPR008990 - Electron transport accessory-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061399.1 photosystem I reaction center subunit IV [Cucumis melo var. makuwa]1.46e-7393.94Show/hide
Query:  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA--SDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP
        VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA  SDEAAPPP A AP   T EEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP
Subjt:  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA--SDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP

Query:  NTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        NTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  NTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

KAE8651724.1 hypothetical protein Csa_006032 [Cucumis sativus]8.53e-8697.92Show/hide
Query:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYK
        MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPT  TTEEPKPKPAPIGPKRGAKVKILRKESYWYK
Subjt:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEI+EVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

XP_004152807.2 photosystem I reaction center subunit IV, chloroplastic [Cucumis sativus]4.38e-8797.92Show/hide
Query:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYK
        MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPT  TTEEPKPKPAPIGPKRGAKVKILRKESYWYK
Subjt:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEI+EVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

XP_008441802.1 PREDICTED: photosystem I reaction center subunit IV, chloroplastic-like [Cucumis melo]1.75e-8294.52Show/hide
Query:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA--SDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYW
        MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA  SDEAAPPP A AP   T EEPKPKPAPIGPKRGAKVKILRKESYW
Subjt:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA--SDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYW

Query:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

XP_038889433.1 photosystem I reaction center subunit IV, chloroplastic-like [Benincasa hispida]1.57e-8093.75Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA--SDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYK
        MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA  SDEAAPPP A AP   T EEPKPKPAPIGPKRGAKVKILRKESYWYK
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRA--SDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        DVGSVVTVDQDPNTRYPVVVRF+KVNYASVSTNNYALDEIEEVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

TrEMBL top hitse value%identityAlignment
A0A0A0LJQ1 Uncharacterized protein4.5e-6697.92Show/hide
Query:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYK
        MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPT  TTEEPKPKPAPIGPKRGAKVKILRKESYWYK
Subjt:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEI+EVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

A0A1S3B3T3 photosystem I reaction center subunit IV, chloroplastic-like1.4e-6294.52Show/hide
Query:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR--ASDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYW
        MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR  ASDEAAPPP A AP   T EEPKPKPAPIGPKRGAKVKILRKESYW
Subjt:  MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR--ASDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYW

Query:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  YKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

A0A5A7V6V9 Photosystem I reaction center subunit IV7.2e-5693.94Show/hide
Query:  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR--ASDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP
        VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR  ASDEAAPPP A AP   T EEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP
Subjt:  VVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIR--ASDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDP

Query:  NTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        NTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  NTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

A0A6J1FC09 photosystem I reaction center subunit IV, chloroplastic-like9.8e-5384.72Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAS--DEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYK
        MAASNLSCIASGV+IPSSTTI SSSSR SS+AFFPKNS SISRS RLV+RA+  + AAPPPAA A      E PKPKPAPIGPKRG KVKILR+ESYWYK
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAS--DEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

A0A6J1HLT8 photosystem I reaction center subunit IV, chloroplastic-like6.3e-5284.03Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAS--DEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYK
        MAASNLSCIASGV+IPSS TI SSSSR SS+AFFPKNS SISRS RLV+RA+  + AAPPPAA A      E PKPKPAPIGPKRG KVKILR+ESYWYK
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRAS--DEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYK

Query:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
Subjt:  DVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

SwissProt top hitse value%identityAlignment
P12354 Photosystem I reaction center subunit IV, chloroplastic3.4e-3467.48Show/hide
Query:  SSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTGVTTEEPK--PKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVR
        SS + RL      P  + S  RS+RLV+RA++EAA  PAA +P G   E PK   KP PIGPKRG+KV+I+RKESYWYK VGSVV VDQDP TRYPVVVR
Subjt:  SSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTGVTTEEPK--PKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQDPNTRYPVVVR

Query:  FNKVNYASVSTNNYALDEIEEVA
        FNKVNYA+VSTNNYALDEI+EVA
Subjt:  FNKVNYASVSTNNYALDEIEEVA

P13194 Photosystem I reaction center subunit IV, chloroplastic4.3e-2953.33Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAP-------TGVTTEEP-KPKPAPIGPKRGAKVKILRK
        MA++N++   S  ++ +     ++    S ++F P N   +    +LV RA +  A  PA  AP         V T+EP K KP P GPKRG KVKILR+
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAP-------TGVTTEEP-KPKPAPIGPKRGAKVKILRK

Query:  ESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
        ESYWY   GSVVTVDQDPNTRYPVVVRF KVNYA VSTNNYALDEI+EVA
Subjt:  ESYWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

Q41228 Photosystem I reaction center subunit IV A, chloroplastic2.2e-3357.45Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYKDV
        MA+ N++  AS  ++ +    S++++  +++ FF  + N  S + RLV+RA++EAAPP AA             KP PIGPKRG KV+ILRKESYWYK  
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYKDV

Query:  GSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV
        GSVV  DQDPNTRYPVVVRFNKVNYA+VSTNNYALDEIEEV
Subjt:  GSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV

Q41229 Photosystem I reaction center subunit IV B, chloroplastic1.4e-3557.75Show/hide
Query:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRS-SRLVIRASDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYKD
        MA+S+++  ASG ++ +    +S+++  +S+ FF  + N+ + +  RLV+RA++EAAPP A     G        KP PIGPKRG KV++LRKESYWYK 
Subjt:  MAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRS-SRLVIRASDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYKD

Query:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV
        VGSVV VDQDPNTRYPVVVRFNKVNYA+VSTNNYALDE+EEV
Subjt:  VGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV

Q9S831 Photosystem I reaction center subunit IV A, chloroplastic1.3e-3360.14Show/hide
Query:  VIPSS-TTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAP--------PPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVV
        V+P++ T+++ +SS  SS++F P      +  SRLV+RA+++ AP        P AA AP G T    KPKP PIGPKRG+KVKILR+ESYW+K+VGSVV
Subjt:  VIPSS-TTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAP--------PPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVV

Query:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
         VDQDP TRYPVVVRF KVNYA++STNNYALDE+EEVA
Subjt:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA

Arabidopsis top hitse value%identityAlignment
AT2G20260.1 photosystem I subunit E-21.5e-2952.38Show/hide
Query:  LSCIASGVVIPSSTTIS---SSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTGVTTEEPKP--------KPAPIGPKRGAKVKILRKES
        ++  A+G ++ ++   +    SS   + ++F P      S  SRLV+RA+++  PP  A++ +  TT    P        KP PIGPKRG+KVKILRKES
Subjt:  LSCIASGVVIPSSTTIS---SSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTGVTTEEPKP--------KPAPIGPKRGAKVKILRKES

Query:  YWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV
        YWYK+VGSVV VDQDP TRYPVVVRF KVNYA++STNNYALDE+EEV
Subjt:  YWYKDVGSVVTVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEV

AT4G28750.1 Photosystem I reaction centre subunit IV / PsaE protein9.1e-3560.14Show/hide
Query:  VIPSS-TTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAP--------PPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVV
        V+P++ T+++ +SS  SS++F P      +  SRLV+RA+++ AP        P AA AP G T    KPKP PIGPKRG+KVKILR+ESYW+K+VGSVV
Subjt:  VIPSS-TTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAP--------PPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVV

Query:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA
         VDQDP TRYPVVVRF KVNYA++STNNYALDE+EEVA
Subjt:  TVDQDPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGCTGCCTCTAACCTTTCTTGCATTGCTTCTGGAGTTGTGATCCCTTCTTCAACCACCATTTCATCTTCCTCTTCTAGGTTATCTTCTTTGGCCTTCTTCCC
CAAGAATTCCAACTCTATTTCTAGATCTTCTCGATTGGTTATCCGTGCCTCCGACGAGGCTGCTCCCCCACCCGCTGCTACTGCACCCACTGGCGTCACCACCGAAGAGC
CTAAGCCTAAGCCTGCCCCTATTGGTCCCAAAAGAGGTGCCAAGGTGAAGATTTTAAGGAAAGAATCTTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTTGACCAG
GATCCGAACACTCGATATCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACAAACAACTATGCACTTGATGAGATTGAAGAAGTTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGGCTGCCTCTAACCTTTCTTGCATTGCTTCTGGAGTTGTGATCCCTTCTTCAACCACCATTTCATCTTCCTCTTCTAGGTTATCTTCTTTGGCCTTCTTCCC
CAAGAATTCCAACTCTATTTCTAGATCTTCTCGATTGGTTATCCGTGCCTCCGACGAGGCTGCTCCCCCACCCGCTGCTACTGCACCCACTGGCGTCACCACCGAAGAGC
CTAAGCCTAAGCCTGCCCCTATTGGTCCCAAAAGAGGTGCCAAGGTGAAGATTTTAAGGAAAGAATCTTACTGGTACAAGGATGTTGGATCTGTTGTAACAGTTGACCAG
GATCCGAACACTCGATATCCAGTTGTGGTTAGATTTAACAAAGTAAATTATGCAAGTGTATCAACAAACAACTATGCACTTGATGAGATTGAAGAAGTTGCTTAA
Protein sequenceShow/hide protein sequence
MAMAASNLSCIASGVVIPSSTTISSSSSRLSSLAFFPKNSNSISRSSRLVIRASDEAAPPPAATAPTGVTTEEPKPKPAPIGPKRGAKVKILRKESYWYKDVGSVVTVDQ
DPNTRYPVVVRFNKVNYASVSTNNYALDEIEEVA