CuGenDBv2

Gene ID	Chy5G098330
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	disease resistance protein RGA2-like
Genome location	chrH05:11253541..11254293
RNA-Seq Expression	Chy5G098330
Synteny	Chy5G098330
Gene Ontology terms	GO:0006952 - defense response (biological process) GO:0043531 - ADP binding (molecular function)
InterPro domains	IPR032675 - Leucine-rich repeat domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0058595.1 putative disease resistance protein RGA1 [Cucumis melo var. makuwa]

1.26e-82

72.38

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Query:  MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLT
        MK KFLQLKSGLQ+L+L W+K  IG+  LEDVIYESVLDCLQPHSNL+EI ID YGGV L NW+SS K LGCLVTI LY C RLRHL + DQFPNLK L 
Subjt:  MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLT

Query:  LQNLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLK
        L++LPNIEY+IV+N+DSVSSSTIFP LK+  IS  PKLVSWCK +T  KSP +IFP+LS L I G   LHMLKFWHAPNLK
Subjt:  LQNLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLK

TYK10413.1 putative disease resistance RPP13-like protein 1 isoform X1 [Cucumis melo var. makuwa]

1.18e-102

73.87

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Query:  MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLT
        MK KFLQ KS LQ L+L W+K  I DD+LEDVIYESVLDCLQPHSNL++I I+ YGGV LCNW+SS K LGCLVT+ LY C RLRHL R DQFPNLK L+
Subjt:  MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLT

Query:  LQNLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLKLLKISDSEDELNVVPLKNY
        L+ LPNIEY+IV+N+DSVSSST FP +K+  IS  PKLVSWCK +T  KSP +IFP LSSL I G C LHMLKFWHAPNLK LKISDSEDELNVVPLKNY
Subjt:  LQNLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLKLLKISDSEDELNVVPLKNY

Query:  ENLTSLFLHNLSRVEYLPKCWQ
        ENLTSL L NLS +EYLP+CWQ
Subjt:  ENLTSLFLHNLSRVEYLPKCWQ

XP_016902658.1 PREDICTED: disease resistance protein RGA2-like [Cucumis melo]

2.59e-97

70.94

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Query:  MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLT
        MK KFLQLKSGLQ+L+L             DVIYESVLDCLQPHSNL++I ID YGGVNLCNW+S  K L CLVTI L+ C RLRHL R DQFPNLK L 
Subjt:  MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLT

Query:  LQNLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLKLLKISDSEDELNVVPLKNY
        L +LPN+EY+IV+N+DSVSSSTIFP L +  ISK PKLVSWCK +TSTKSPT+IFP+LS L I G   LHMLKFWHAPNLK L I DSEDELNVVPLK Y
Subjt:  LQNLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLKLLKISDSEDELNVVPLKNY

Query:  ENLTSLFLHNLSRVEYLPKCWQHYMTSLQLLCLS
        ENLTSL L NLS++EY P+CWQH MTSLQ L LS
Subjt:  ENLTSLFLHNLSRVEYLPKCWQHYMTSLQLLCLS

XP_016903409.1 PREDICTED: putative disease resistance protein RGA1 [Cucumis melo]

1.85e-110

73.19

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Query:  MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLT
        MK KFLQ KS LQ L+L W+K  I DD+LEDVIYESVLDCLQPHSNL++I I+ YGGV LCNW+SS K LGCLVT+ LY C RLRHL R DQFPNLK L+
Subjt:  MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLT

Query:  LQNLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLKLLKISDSEDELNVVPLKNY
        L+ LPNIEY+IV+N+DSVSSST FP +K+  IS  PKLVSWCK +T  KSP +IFP LSSL I G C LHMLKFWHAPNLK LKISDSEDELNVVPLKNY
Subjt:  LQNLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLKLLKISDSEDELNVVPLKNY

Query:  ENLTSLFLHNLSRVEYLPKCWQHYMTSLQLLCLSK
        ENLTSL L NLS +EYLP+CWQH MTSL+ LCL +
Subjt:  ENLTSLFLHNLSRVEYLPKCWQHYMTSLQLLCLSK

XP_031736581.1 putative disease resistance protein RGA4 [Cucumis sativus]

8.86e-146

92.77

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Query:  MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLT
        MKSK LQLKSGLQ+LELQWKKPKIGDDQLEDV+YESVLDCLQPHSNLKEI ID YGGVNLCNW+SSNKSLGCLVTIYLYRC+RLRHLFRLDQFPNLKYLT
Subjt:  MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLT

Query:  LQNLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLKLLKISDSEDELNVVPLKNY
        LQNLPNIEYMIVDNDDSVSSSTIFP LKKF ISK PKLVSWCK STSTKSPTVIFPHLSSLMIRGPCRLHMLK+WHAP LKLL+ISDSEDELNVVPLK Y
Subjt:  LQNLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLKLLKISDSEDELNVVPLKNY

Query:  ENLTSLFLHNLSRVEYLPKCWQHYMTSLQLLCLSK
        ENLTSLFLHNLSRVEYLP+CWQHYMTSLQLL LSK
Subjt:  ENLTSLFLHNLSRVEYLPKCWQHYMTSLQLLCLSK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LMP4 Rx_N domain-containing protein

1.0e-121

92.77

Show/hide

Query:  MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLT
        MKSK LQLKSGLQ+LELQWKKPKIGDDQLEDV+YESVLDCLQPHSNLKEI ID YGGVNLCNW+SSNKSLGCLVTIYLYRC+RLRHLFRLDQFPNLKYLT
Subjt:  MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLT

Query:  LQNLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLKLLKISDSEDELNVVPLKNY
        LQNLPNIEYMIVDNDDSVSSSTIFP LKKF ISK PKLVSWCK STSTKSPTVIFPHLSSLMIRGPCRLHMLK+WHAP LKLL+ISDSEDELNVVPLK Y
Subjt:  LQNLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLKLLKISDSEDELNVVPLKNY

Query:  ENLTSLFLHNLSRVEYLPKCWQHYMTSLQLLCLSK
        ENLTSLFLHNLSRVEYLP+CWQHYMTSLQLL LSK
Subjt:  ENLTSLFLHNLSRVEYLPKCWQHYMTSLQLLCLSK

A0A1S4E358 disease resistance protein RGA2-like

1.6e-82

70.94

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Query:  MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLT
        MK KFLQLKSGLQ+L            +L DVIYESVLDCLQPHSNL++I ID YGGVNLCNW+S  K L CLVTI L+ C RLRHL R DQFPNLK L 
Subjt:  MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLT

Query:  LQNLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLKLLKISDSEDELNVVPLKNY
        L +LPN+EY+IV+N+DSVSSSTIFP L +  ISK PKLVSWCK +TSTKSPT+IFP+LS L I G   LHMLKFWHAPNLK L I DSEDELNVVPLK Y
Subjt:  LQNLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLKLLKISDSEDELNVVPLKNY

Query:  ENLTSLFLHNLSRVEYLPKCWQHYMTSLQLLCLS
        ENLTSL L NLS++EY P+CWQH MTSLQ L LS
Subjt:  ENLTSLFLHNLSRVEYLPKCWQHYMTSLQLLCLS

A0A1S4E5A9 putative disease resistance protein RGA1

2.0e-90

73.19

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Query:  MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLT
        MK KFLQ KS LQ L+L W+K  I DD+LEDVIYESVLDCLQPHSNL++I I+ YGGV LCNW+SS K LGCLVT+ LY C RLRHL R DQFPNLK L+
Subjt:  MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLT

Query:  LQNLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLKLLKISDSEDELNVVPLKNY
        L+ LPNIEY+IV+N+DSVSSST FP +K+  IS  PKLVSWCK +T  KSP +IFP LSSL I G C LHMLKFWHAPNLK LKISDSEDELNVVPLKNY
Subjt:  LQNLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLKLLKISDSEDELNVVPLKNY

Query:  ENLTSLFLHNLSRVEYLPKCWQHYMTSLQLLCLSK
        ENLTSL L NLS +EYLP+CWQH MTSL+ LCL +
Subjt:  ENLTSLFLHNLSRVEYLPKCWQHYMTSLQLLCLSK

A0A5A7UYG3 Putative disease resistance protein RGA1

3.3e-64

72.38

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Query:  MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLT
        MK KFLQLKSGLQ+L+L W+K  IG  +LEDVIYESVLDCLQPHSNL+EI ID YGGV L NW+SS K LGCLVTI LY C RLRHL + DQFPNLK L 
Subjt:  MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLT

Query:  LQNLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLK
        L++LPNIEY+IV+N+DSVSSSTIFP LK+  IS  PKLVSWCK +T  KSP +IFP+LS L I G   LHMLKFWHAPNLK
Subjt:  LQNLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLK

A0A5D3CEX2 Putative disease resistance RPP13-like protein 1 isoform X1

2.0e-85

73.87

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Query:  MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLT
        MK KFLQ KS LQ L+L W+K  I DD+LEDVIYESVLDCLQPHSNL++I I+ YGGV LCNW+SS K LGCLVT+ LY C RLRHL R DQFPNLK L+
Subjt:  MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLT

Query:  LQNLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLKLLKISDSEDELNVVPLKNY
        L+ LPNIEY+IV+N+DSVSSST FP +K+  IS  PKLVSWCK +T  KSP +IFP LSSL I G C LHMLKFWHAPNLK LKISDSEDELNVVPLKNY
Subjt:  LQNLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLKLLKISDSEDELNVVPLKNY

Query:  ENLTSLFLHNLSRVEYLPKCWQ
        ENLTSL L NLS +EYLP+CWQ
Subjt:  ENLTSLFLHNLSRVEYLPKCWQ

SwissProt top hits

e value

%identity

Alignment

Q7XA42 Putative disease resistance protein RGA1

1.7e-04

25.19

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Query:  KSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLTL
        K   L  K+ L  L L W      D   +      VL+ L+PHSNLK + I+ +GG+ L +W++ +  L  +V+I +  C     L    + P L+ L L
Subjt:  KSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLTL

Query:  Q-NLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTV-----------IFPHLSSLMIRGPCRLHMLKFWHAPNLKLLKISDSE
             ++EY+    +D+V     FP L+K +I     L    K+    + P +           + P LSS+                 NL+ L   D  
Subjt:  Q-NLPNIEYMIVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTV-----------IFPHLSSLMIRGPCRLHMLKFWHAPNLKLLKISDSE

Query:  DELNVVPL-----KNYENLTSLFLHNLSRVEYLPKCWQHYMTSLQLLCLSKRAYRDGLATSP
        D +    L     K+  NL  L +     ++ LP      + SL  L   K  + D L + P
Subjt:  DELNVVPL-----KNYENLTSLFLHNLSRVEYLPKCWQHYMTSLQLLCLSKRAYRDGLATSP

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAGAGTAAGTTCTTGCAACTAAAGTCTGGTCTTCAACAGTTGGAGTTACAATGGAAGAAACCTAAAATTGGTGATGATCAATTGGAGGATGTGATCTACGAAAGTGT
TTTAGATTGCTTACAACCACATTCAAATCTTAAAGAGATATGTATTGATGAATATGGTGGAGTGAATTTATGTAATTGGATATCCTCTAATAAGTCCCTTGGTTGTCTTG
TCACTATATATCTTTATCGTTGTAGAAGATTACGACATCTCTTCAGATTAGATCAATTTCCTAATCTCAAGTATCTTACGCTTCAAAACTTACCCAACATCGAGTACATG
ATTGTAGACAATGATGATTCAGTTTCTTCATCAACAATTTTTCCATACCTAAAGAAATTTATTATTTCAAAAAAGCCTAAGTTGGTGAGCTGGTGCAAGGTTTCAACCTC
AACCAAATCTCCTACAGTAATATTTCCTCACCTTTCTAGTTTAATGATTCGCGGTCCTTGCCGACTACATATGTTGAAGTTTTGGCATGCACCTAACTTGAAACTCTTGA
AAATTAGTGATTCAGAGGATGAGTTGAATGTTGTACCATTGAAAAATTATGAAAACCTCACCTCTCTATTTCTTCACAATTTGAGTAGAGTGGAGTACTTGCCCAAGTGT
TGGCAACATTATATGACATCTCTACAACTTCTTTGTTTAAGCAAAAGAGCTTACAGGGATGGATTGGCAACCTCACCTCACTTACAGGATTGA

mRNA sequence

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Protein sequence

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MKSKFLQLKSGLQQLELQWKKPKIGDDQLEDVIYESVLDCLQPHSNLKEICIDEYGGVNLCNWISSNKSLGCLVTIYLYRCRRLRHLFRLDQFPNLKYLTLQNLPNIEYM
IVDNDDSVSSSTIFPYLKKFIISKKPKLVSWCKVSTSTKSPTVIFPHLSSLMIRGPCRLHMLKFWHAPNLKLLKISDSEDELNVVPLKNYENLTSLFLHNLSRVEYLPKC
WQHYMTSLQLLCLSKRAYRDGLATSPHLQD

Chy5G098330 (gene) of Cucumber (hystrix) v1 genome