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Chy5G098630 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy5G098630
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionConserved oligomeric Golgi complex subunit 1
Genome locationchrH05:11689004..11689569
RNA-Seq ExpressionChy5G098630
SyntenyChy5G098630
Gene Ontology termsGO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:0015031 - protein transport (biological process)
GO:0016020 - membrane (cellular component)
GO:0017119 - Golgi transport complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152888.1 conserved oligomeric Golgi complex subunit 1 [Cucumis sativus]3.20e-2198.08Show/hide
Query:  MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
        MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTR QIQSKQEELRQLV
Subjt:  MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
XP_008441924.1 PREDICTED: conserved oligomeric Golgi complex subunit 1 [Cucumis melo]8.13e-2196.15Show/hide
Query:  MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
        MGGPSASSIDGGGG+RDAESLFRTKPISEIRKVESSTR QIQSKQEELRQLV
Subjt:  MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
XP_022938035.1 conserved oligomeric Golgi complex subunit 1-like [Cucurbita moschata]2.49e-1992.31Show/hide
Query:  MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
        MG PSASS DGGGG+RDAESLFRTKPISEIRKVESSTR QIQSKQEELRQLV
Subjt:  MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
XP_023537548.1 conserved oligomeric Golgi complex subunit 1-like [Cucurbita pepo subsp. pepo]2.49e-1992.31Show/hide
Query:  MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
        MG PSASS DGGGG+RDAESLFRTKPISEIRKVESSTR QIQSKQEELRQLV
Subjt:  MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
XP_038889846.1 conserved oligomeric Golgi complex subunit 1 [Benincasa hispida]4.63e-1994.23Show/hide
Query:  MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
        MG PSASSIDGGGG RDAESLFRTKPISEIRKVESSTR QIQSKQEELRQLV
Subjt:  MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
TrEMBL top hitse value%identityAlignment
A0A0A0LJG1 Conserved oligomeric Golgi complex subunit 14.7e-1798.08Show/hide
Query:  MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
        MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTR QIQSKQEELRQLV
Subjt:  MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
A0A1S3B4J7 Conserved oligomeric Golgi complex subunit 11.0e-1696.15Show/hide
Query:  MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
        MGGPSASSIDGGGG+RDAESLFRTKPISEIRKVESSTR QIQSKQEELRQLV
Subjt:  MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
A0A5A7TWV3 Conserved oligomeric Golgi complex subunit 11.0e-1696.15Show/hide
Query:  MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
        MGGPSASSIDGGGG+RDAESLFRTKPISEIRKVESSTR QIQSKQEELRQLV
Subjt:  MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
A0A6J1D9N2 Conserved oligomeric Golgi complex subunit 14.4e-1592.31Show/hide
Query:  MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
        MG PSASS DGGGG+RDAESLFRTKPISEIRKVESSTR QIQSKQEELRQLV
Subjt:  MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
A0A6J1FII6 Conserved oligomeric Golgi complex subunit 12.0e-1592.31Show/hide
Query:  MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
        MG PSASS DGGGG+RDAESLFRTKPISEIRKVESSTR QIQSKQEELRQLV
Subjt:  MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
SwissProt top hitse value%identityAlignment
Q9FFF3 Conserved oligomeric Golgi complex subunit 11.6e-0972Show/hide
Query:  PSASSI-DGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
        PSA S+   GGG RDAESLFRTKP+SEIR VES+TR  I+ K+EELRQLV
Subjt:  PSASSI-DGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
Arabidopsis top hitse value%identityAlignment
AT5G16300.1 Vps51/Vps67 family (components of vesicular transport) protein1.1e-1072Show/hide
Query:  PSASSI-DGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
        PSA S+   GGG RDAESLFRTKP+SEIR VES+TR  I+ K+EELRQLV
Subjt:  PSASSI-DGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
AT5G16300.2 Vps51/Vps67 family (components of vesicular transport) protein1.1e-1072Show/hide
Query:  PSASSI-DGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
        PSA S+   GGG RDAESLFRTKP+SEIR VES+TR  I+ K+EELRQLV
Subjt:  PSASSI-DGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
AT5G16300.3 Vps51/Vps67 family (components of vesicular transport) protein1.1e-1072Show/hide
Query:  PSASSI-DGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
        PSA S+   GGG RDAESLFRTKP+SEIR VES+TR  I+ K+EELRQLV
Subjt:  PSASSI-DGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
AT5G16300.4 Vps51/Vps67 family (components of vesicular transport) protein1.1e-1072Show/hide
Query:  PSASSI-DGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV
        PSA S+   GGG RDAESLFRTKP+SEIR VES+TR  I+ K+EELRQLV
Subjt:  PSASSI-DGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGACCTTCAGCTTCCTCTATTGATGGAGGAGGAGGTTTCCGCGATGCCGAATCTCTCTTCCGAACGAAACCCATTTCCGAAATTCGTAAGGTTGAATCCTCCAC
CCGTGTCCAGATCCAATCCAAGCAAGAAGAGTTACGGCAACTTGTCGCTGCTGTTCGTTCATCTCCGTGCGAAGCATGTGCAACAAGCTTTGACGACCATAATGCTGATT
CTGACCGTAAGTTTCTCTTCCAATTTTCCTCTGCTTCAGCACCATTGGCAGATAGTGGAGAGCTTCAAATCTCAGATTTCACAGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGACCTTCAGCTTCCTCTATTGATGGAGGAGGAGGTTTCCGCGATGCCGAATCTCTCTTCCGAACGAAACCCATTTCCGAAATTCGTAAGGTTGAATCCTCCAC
CCGTGTCCAGATCCAATCCAAGCAAGAAGAGTTACGGCAACTTGTCGCTGCTGTTCGTTCATCTCCGTGCGAAGCATGTGCAACAAGCTTTGACGACCATAATGCTGATT
CTGACCGTAAGTTTCTCTTCCAATTTTCCTCTGCTTCAGCACCATTGGCAGATAGTGGAGAGCTTCAAATCTCAGATTTCACAGCGTAG
Protein sequenceShow/hide protein sequence
MGGPSASSIDGGGGFRDAESLFRTKPISEIRKVESSTRVQIQSKQEELRQLVAAVRSSPCEACATSFDDHNADSDRKFLFQFSSASAPLADSGELQISDFTA