CuGenDBv2

Gene ID	Chy5G100170
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	nuclear pore complex protein NUP43
Genome location	chrH05:14407237..14415836
RNA-Seq Expression	Chy5G100170
Synteny	Chy5G100170
Gene Ontology terms	GO:0031080 - nuclear pore outer ring (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR015943 - WD40/YVTN repeat-like-containing domain superfamily IPR036322 - WD40-repeat-containing domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6586038.1 Nuclear pore complex protein NUP43, partial [Cucurbita argyrosperma subsp. sororia]

4.68e-241

91.14

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHV
        MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFAV+ALFDSDSDSSSIEIHSLTQNPLD+ P S W SPSR+SSLKTSQ + NPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHV

Query:  FSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
         SVEPM+ASLDSELSVPEK+LHD PISCVDVMDGGGECLTV+EDGRV+LVSVGESGL+YRRIFDSNGLVSY A KWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  FSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFK DWASGIVHCIDIHPSRKHTCLAGGSFGT FAWDLR QQQPIILSGLEGSKTSN SPCESEVWEV YDPYIKSGN+GGMSS+QILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP
        GI+TSIEQGK PVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP

XP_004144716.1 nuclear pore complex protein NUP43 [Cucumis sativus]

7.99e-258

98.29

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHV
        MAI SPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLH NPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHV

Query:  FSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
         SVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
Subjt:  FSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFKA+WASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEV YDPYIKSGNLGGMSSTQILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP
        GILTSIEQGK PVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP

XP_008452472.1 PREDICTED: nuclear pore complex protein NUP43 [Cucumis melo]

1.73e-252

95.99

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHV
        MAI+SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFAVIALFDSD DSSSIEIHSLTQNPLDI PHSTW+SPSRVSSLKTSQLH NPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHV

Query:  FSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
         SVEPMEASLDSELSVPEKMLHDGPISCVDVMD GGECLTVSEDGRV+LVSVGESGL+YRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
Subjt:  FSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEG+KTSNPSPCESEVWEV YDPYIKSGNLGGMSSTQILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSR
        GILTSIEQGK PVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSR
Subjt:  GILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSR

XP_022937892.1 nuclear pore complex protein NUP43 [Cucurbita moschata]

1.63e-241

91.43

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHV
        MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFAV+ALFDSDSDSSSIEIHSLTQNPLD+ P S W SPSR+SSLKTSQ + NPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHV

Query:  FSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
         SVEPM+ASLDSELSVPEK+LHD PISCVDVMDGGGECLTV+EDGRV+LVSVGESGL+YRRIFDSNGLVSY A KWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  FSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFK DWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLR QQQPIILSGLEGSKTSN SPCESEVWEV YDPYIKSGN+GGMSS+QILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP
        GI+TSIEQGK PVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP

XP_038889924.1 nuclear pore complex protein NUP43 [Benincasa hispida]

3.30e-241

92.55

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHV
        MAIVSPQQQPQIHRFPQFKYVDGVRWL  LS FSR AVIALFDSDSDSSSIEIHSLTQ PLDI PHSTW SPSRVSSLKTSQL+ NPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHV

Query:  FSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
         SVEPMEA+LDSELSVPEKMLHD PISCVDVMDGGGECLTVSEDGRV+LVS+GESGL+Y RIFDSNGLVSY AVKWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  FSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFKADWASGIVH IDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEV YDPYIKSGNLGGMSS+QILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSR
        GILTSIEQGK PV+LLAEPCAINGFDI+R HPSEVICNLEWES+AILSR
Subjt:  GILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJ46 Uncharacterized protein

3.6e-202

98.29

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHV
        MAI SPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLH NPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHV

Query:  FSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
         SVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
Subjt:  FSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFKA+WASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEV YDPYIKSGNLGGMSSTQILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP
        GILTSIEQGK PVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP

A0A1S3BTA6 nuclear pore complex protein NUP43

4.1e-198

95.99

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHV
        MAI+SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFAVIALFDSD DSSSIEIHSLTQNPLDI PHSTW+SPSRVSSLKTSQLH NPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHV

Query:  FSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
         SVEPMEASLDSELSVPEKMLHDGPISCVDVMD GGECLTVSEDGRV+LVSVGESGL+YRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
Subjt:  FSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEG+KTSNPSPCESEVWEV YDPYIKSGNLGGMSSTQILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSR
        GILTSIEQGK PVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSR
Subjt:  GILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSR

A0A5D3BAS9 Nuclear pore complex protein NUP43

4.1e-198

95.99

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHV
        MAI+SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFAVIALFDSD DSSSIEIHSLTQNPLDI PHSTW+SPSRVSSLKTSQLH NPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHV

Query:  FSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
         SVEPMEASLDSELSVPEKMLHDGPISCVDVMD GGECLTVSEDGRV+LVSVGESGL+YRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
Subjt:  FSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEG+KTSNPSPCESEVWEV YDPYIKSGNLGGMSSTQILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSR
        GILTSIEQGK PVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSR
Subjt:  GILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSR

A0A6J1FCG9 nuclear pore complex protein NUP43

9.2e-190

91.43

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHV
        MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFAV+ALFDSDSDSSSIEIHSLTQNPLD+ P S W SPSR+SSLKTSQ + NPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHV

Query:  FSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
         SVEPM+ASLDSELSVPEK+LHD PISCVDVMDGGGECLTV+EDGRV+LVSVGESGL+YRRIFDSNGLVSY A KWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  FSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFK DWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLR QQQPIILSGLEGSKTSN SPCESEVWEV YDPYIKSGN+GGMSS+QILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP
        GI+TSIEQGK PVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP

A0A6J1HYH3 nuclear pore complex protein NUP43

8.7e-188

Show/hide

Query:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHV
        MAIVSPQQQPQIHRFPQFKY+DGVRWLPPLSAF RFAV+ALFDSDSDSSSIEIHSLTQNPLD+ P S W SPSR+SSLKTSQ + NPLVFASTYTGSLHV
Subjt:  MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHV

Query:  FSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
         SVEPM+ASLDSELSVPEK+LHD PISCVDVMD GGECLTV+EDGRV+LVSVGESGL+YRRIFDSNGLVSY A KWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  FSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSED
        GAV QFK DWASGIVHC+DIHPSRKHTCLAGGSFGTVFAWDLR QQQPIILSGLEGSKTSN SPCESEVWEV+YDPYIKSGN+GGMSS+QILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP
        GI+TSIEQGK PVELLAEPCAINGFDI+ QHPSEVICNLEWESVAILSRP
Subjt:  GILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP

SwissProt top hits

e value

%identity

Alignment

Q24JJ9 Nuclear pore complex protein NUP43

3.1e-110

58.56

Show/hide

Query:  QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLD-------IVPHSTWISPSRVSSLKTSQLHG-----NPLVFASTY
        Q   Q+HR PQ KYVDGVRWLP  SA +RF   A +D+D DSSSIEI SL  NP         I   S+W SPSRVSSL+ +   G      P+V A+T 
Subjt:  QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLD-------IVPHSTWISPSRVSSLKTSQLHG-----NPLVFASTY

Query:  TGSLHVFSVEPMEASLDSELSVPE-KMLHDGPISCVDVMDGGGECLTVSEDGRVSLVS-VGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQ
        +GSLHV  ++ +E +   E    E +  H G +  VD  + GGEC+TV EDGRV++V  V   GL YR++FD NGLV+Y AVKWASPTEFVTGG GF LQ
Subjt:  TGSLHVFSVEPMEASLDSELSVPE-KMLHDGPISCVDVMDGGGECLTVSEDGRVSLVS-VGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQ

Query:  WWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSS
         WDQRK G AVSQ K +W     S IVH IDIHPSRKHTC+AGGS GTVFAWDLR  QQPI+LSG+  S+  N    ESEVWEVQYD Y KS     +SS
Subjt:  WWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSS

Query:  TQILPAMICSEDGILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP
        ++ILP M CSEDGIL  IEQG+ P+ELLAEPCAIN FDI+RQ+P +VIC+LEWES+A+ SRP
Subjt:  TQILPAMICSEDGILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP

Arabidopsis top hits

e value

%identity

Alignment

AT4G30840.1 Transducin/WD40 repeat-like superfamily protein

2.2e-111

58.56

Show/hide

Query:  QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLD-------IVPHSTWISPSRVSSLKTSQLHG-----NPLVFASTY
        Q   Q+HR PQ KYVDGVRWLP  SA +RF   A +D+D DSSSIEI SL  NP         I   S+W SPSRVSSL+ +   G      P+V A+T 
Subjt:  QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLD-------IVPHSTWISPSRVSSLKTSQLHG-----NPLVFASTY

Query:  TGSLHVFSVEPMEASLDSELSVPE-KMLHDGPISCVDVMDGGGECLTVSEDGRVSLVS-VGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQ
        +GSLHV  ++ +E +   E    E +  H G +  VD  + GGEC+TV EDGRV++V  V   GL YR++FD NGLV+Y AVKWASPTEFVTGG GF LQ
Subjt:  TGSLHVFSVEPMEASLDSELSVPE-KMLHDGPISCVDVMDGGGECLTVSEDGRVSLVS-VGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQ

Query:  WWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSS
         WDQRK G AVSQ K +W     S IVH IDIHPSRKHTC+AGGS GTVFAWDLR  QQPI+LSG+  S+  N    ESEVWEVQYD Y KS     +SS
Subjt:  WWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSS

Query:  TQILPAMICSEDGILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP
        ++ILP M CSEDGIL  IEQG+ P+ELLAEPCAIN FDI+RQ+P +VIC+LEWES+A+ SRP
Subjt:  TQILPAMICSEDGILTSIEQGKVPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP

Sequences

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CDS sequence

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ATGGCGATCGTTAGTCCCCAACAGCAACCGCAAATCCACAGGTTCCCGCAATTCAAGTATGTTGATGGTGTTCGTTGGCTTCCACCACTCTCCGCATTTAGCCGGTTTGC
CGTCATTGCCCTTTTCGACTCTGATTCCGACTCATCCTCCATTGAAATTCACTCCTTGACTCAAAATCCACTGGATATAGTCCCTCATTCGACATGGATTTCACCTTCAA
GAGTATCTTCACTTAAAACATCTCAACTCCACGGAAACCCTCTTGTTTTCGCTTCGACTTATACAGGTTCTCTTCATGTTTTTTCTGTCGAGCCAATGGAAGCGTCGCTT
GACTCGGAGCTTTCGGTGCCGGAGAAGATGTTGCACGACGGACCTATTTCATGTGTCGATGTGATGGATGGGGGAGGTGAATGCCTGACTGTTTCGGAAGATGGACGGGT
GAGTTTGGTGAGCGTTGGGGAATCTGGATTGAGTTATCGTCGGATATTTGATAGTAATGGGTTGGTGTCGTATAACGCGGTGAAATGGGCATCGCCTACTGAGTTTGTGA
CTGGTGGTTGTGGGTTTAGCTTGCAATGGTGGGATCAGAGGAAGCCCGGTGGAGCTGTTTCTCAGTTTAAGGCCGATTGGGCGTCTGGTATAGTTCACTGCATTGATATC
CATCCATCGCGAAAGCATACTTGTTTGGCAGGGGGCTCTTTTGGTACTGTCTTTGCCTGGGATTTGAGGTCACAACAGCAGCCTATCATTCTTTCGGGTCTAGAAGGGAG
CAAAACATCAAATCCTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCAGTATGATCCTTATATTAAGTCTGGCAATCTAGGTGGCATGTCATCTACACAGATTTTACCTG
CTATGATCTGCTCTGAGGACGGGATTCTAACTAGTATTGAGCAAGGCAAGGTGCCTGTGGAACTCCTGGCAGAACCATGTGCAATTAATGGTTTCGACATTAACCGTCAA
CATCCATCAGAAGTGATATGTAACTTGGAGTGGGAATCCGTTGCCATTCTGTCAAGACCTTGA

mRNA sequence

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Protein sequence

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MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHGNPLVFASTYTGSLHVFSVEPMEASL
DSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDI
HPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVQYDPYIKSGNLGGMSSTQILPAMICSEDGILTSIEQGKVPVELLAEPCAINGFDINRQ
HPSEVICNLEWESVAILSRP

Chy5G100170 (gene) of Cucumber (hystrix) v1 genome