; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Chy5G100290 (gene) of Cucumber (hystrix) v1 genome

Gene IDChy5G100290
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionTranslation initiation factor IF-3
Genome locationchrH05:14529639..14532519
RNA-Seq ExpressionChy5G100290
SyntenyChy5G100290
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0032790 - ribosome disassembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsIPR001288 - Translation initiation factor 3
IPR019813 - Translation initiation factor 3, conserved site
IPR019814 - Translation initiation factor 3, N-terminal
IPR019815 - Translation initiation factor 3, C-terminal
IPR036787 - Translation initiation factor 3 (IF-3), N-terminal domain superfamily
IPR036788 - Translation initiation factor 3 (IF-3), C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599141.1 Translation initiation factor IF3-2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.50e-14980.34Show/hide
Query:  MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPIRTSVFARLGGASRSSGPPDSKRSN
        MAGLSG FPFKS+ SQSSA AT TT+++  +++SSSS TPFRTS   LP+ SS SNAF+FRLH SNSLRL+ SSPIRTSVFAR GGA RSSGP  SK S 
Subjt:  MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPIRTSVFARLGGASRSSGPPDSKRSN

Query:  DEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY
        D + LD+S+I+S NVRLID  QNMVG+V K+QAIQMAEDAELDLVV+SPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY IDQHDY
Subjt:  DEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY

Query:  SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPA-VNEVSAGV
        SVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKPA VNEVSA V
Subjt:  SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPA-VNEVSAGV

XP_004144726.1 translation initiation factor IF3-4, chloroplastic [Cucumis sativus]1.30e-17995.32Show/hide
Query:  MAGLSGSFPFKSLLSQSSAAATTTTSS-APPAATSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSP----IRTSVFARLGGASRSSGPPD
        MAGLSGSFPFKSLLSQSSAAATTT+SS A P  TSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSP    IRTSVFARLGGA RSSGPPD
Subjt:  MAGLSGSFPFKSLLSQSSAAATTTTSS-APPAATSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSP----IRTSVFARLGGASRSSGPPD

Query:  SKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRSNDEIGLDISAIKS NVRLIDA QNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVN VSA V
Subjt:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

XP_008452687.1 PREDICTED: translation initiation factor IF-3 [Cucumis melo]1.83e-17492.64Show/hide
Query:  MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSS-NSNAFKFRLHKSNSLRLLFS----SPIRTSVFARLGGASRSSGPPD
        MAGLSGSFPFKSLLSQSSAA+TTT+ +A P  TSSSSTTPFRTS PSLPISSS NSNAFK RLHKSNSLRL+FS    SPIRTSVFARLGGA RSSGPPD
Subjt:  MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSS-NSNAFKFRLHKSNSLRLLFS----SPIRTSVFARLGGASRSSGPPD

Query:  SKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRSNDE GLD+SAI+S NVRLIDA QNMVGVVSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
Subjt:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

XP_022158178.1 translation initiation factor IF3-4, chloroplastic [Momordica charantia]3.54e-15984.01Show/hide
Query:  MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPIRTSVFARLGGASRSSGPPDSKRSN
        MAGL+  FPFK LLSQSSA   TT+S+A  +++S+++  PFRTS   LP+SSS SNAF FRLH SNSLRL+ SSPIR SVFAR GGA RSSGP DSKRS+
Subjt:  MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPIRTSVFARLGGASRSSGPPDSKRSN

Query:  DEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY
        D+ GLD+SAI+S NVRLIDA QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY
Subjt:  DEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY

Query:  SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        SVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSAGV
Subjt:  SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

XP_038891171.1 translation initiation factor IF3-4, chloroplastic [Benincasa hispida]8.65e-16186.96Show/hide
Query:  MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFS----SPIRTSVFARLGGASRSSGPPDS
        MAGLSG FPFK LLSQS+ A  TTTS+A  AATSSSS TPFRTS   LP+SSS +NAFKFRL KSNSLRL+ S    SPIRTSVF+R GGA RSSGP DS
Subjt:  MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFS----SPIRTSVFARLGGASRSSGPPDS

Query:  KRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNID
        KRS+DE GLD+SAI+S NVRLIDA QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNID
Subjt:  KRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNID

Query:  QHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSAGV
        QHDYSVRL+AA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQE PPKKKDKPAVNEVSAGV
Subjt:  QHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSAGV

TrEMBL top hitse value%identityAlignment
A0A0A0LH34 Translation initiation factor IF-37.4e-14095.32Show/hide
Query:  MAGLSGSFPFKSLLSQSSAAATTT-TSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLF----SSPIRTSVFARLGGASRSSGPPD
        MAGLSGSFPFKSLLSQSSAAATTT +SSA P  TSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLF    SSPIRTSVFARLGGA RSSGPPD
Subjt:  MAGLSGSFPFKSLLSQSSAAATTT-TSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLF----SSPIRTSVFARLGGASRSSGPPD

Query:  SKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRSNDEIGLDISAIKS NVRLIDA QNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVN VSA V
Subjt:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

A0A1S3BV82 Translation initiation factor IF-36.5e-13692.64Show/hide
Query:  MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSS-NSNAFKFRLHKSNSLRLLF----SSPIRTSVFARLGGASRSSGPPD
        MAGLSGSFPFKSLLSQSSAA+TTT+ +A P  TSSSSTTPFRTS PSLPISSS NSNAFK RLHKSNSLRL+F    SSPIRTSVFARLGGA RSSGPPD
Subjt:  MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSS-NSNAFKFRLHKSNSLRLLF----SSPIRTSVFARLGGASRSSGPPD

Query:  SKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
        SKRSNDE GLD+SAI+S NVRLIDA QNMVGVVSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI
Subjt:  SKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNI

Query:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
Subjt:  DQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

A0A6J1DYM5 Translation initiation factor IF-33.3e-12484.01Show/hide
Query:  MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPIRTSVFARLGGASRSSGPPDSKRSN
        MAGL+  FPFK LLSQSSA   TT+S+A  +++S+++  PFRTS   LP+SSS SNAF FRLH SNSLRL+ SSPIR SVFAR GGA RSSGP DSKRS+
Subjt:  MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPIRTSVFARLGGASRSSGPPDSKRSN

Query:  DEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY
        D+ GLD+SAI+S NVRLIDA QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY
Subjt:  DEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY

Query:  SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
        SVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSAGV
Subjt:  SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV

A0A6J1G3Y5 Translation initiation factor IF-39.7e-11680.68Show/hide
Query:  MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPIRTSVFARLGGASRSSGPPDSKRSN
        MAGLSG FPFKS+ SQSSA AT TT++     +SSSS TPFRTS   LP+ SS SNAF+FRLH SNSLRL+ SSPIRTSVFAR GGA RSSGP  SKRS 
Subjt:  MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPIRTSVFARLGGASRSSGPPDSKRSN

Query:  DEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY
        D + LD+S+I+S NVRLID  QNMVG+V K+QAIQMAEDAELDLVV+SPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY IDQHDY
Subjt:  DEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY

Query:  SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV
        SVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AVNEVSA V
Subjt:  SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV

A0A6J1KDY9 Translation initiation factor IF-37.4e-11681.02Show/hide
Query:  MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPIRTSVFARLGGASRSSGPPDSKRSN
        MAGLSG FPFKS+ SQSSA AT TTS       SSSS TPFRTS   LP  SS SNA +FRLH SNSLRL+ SSPIRTSVFAR GGA RSSGP  SKRS 
Subjt:  MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPIRTSVFARLGGASRSSGPPDSKRSN

Query:  DEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY
        D + LD+S+I+S NVRLID  QNMVG+V K+QAIQMAEDAELDLVV+SPDADPPVVRIMDY+KYRY+LQKKKR QQKKSAATRMDLKELKMGY IDQHDY
Subjt:  DEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDY

Query:  SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV
        SVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AVNEVSAGV
Subjt:  SVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV

SwissProt top hitse value%identityAlignment
B0JKQ1 Translation initiation factor IF-31.2e-3040.91Show/hide
Query:  DSKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN
        D +R+  ++      I+   +R+ID+  + +G+++ A+A+++AE+ ELDLV+VS  A PPV RIMDY KY++E +KK R  +KK      D+KE+KM Y 
Subjt:  DSKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYN

Query:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK
        ID+HDY+VR+  A++FLK GDKVK  +  +GRE +  N+A EL+ R  +++ ++A  ++A     RN+ ++L P K
Subjt:  IDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK

O82234 Translation initiation factor IF3-2, chloroplastic7.5e-7360.22Show/hide
Query:  SSSTTPFRTSFPSLPISSSNSNAF-------KFRLHKSN-SLRLLFSSPIR----TSVFARLGGASRSSGPPDSKRSND---EIGLDISAIKSTNVRLID
        +SST  F   F  +  + S+ + F         RL K+  S   L  SP R    T  F   GG  R SG     R  +   +  LDIS+I+S  VRLID
Subjt:  SSSTTPFRTSFPSLPISSSNSNAF-------KFRLHKSN-SLRLLFSSPIR----TSVFARLGGASRSSGPPDSKRSND---EIGLDISAIKSTNVRLID

Query:  AAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKV
          QNM+G+VSK +A++MA+DAELDLV++SPDADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSVRL+AA+KFL+DGDKVKV
Subjt:  AAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKV

Query:  IVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA
        IV++KGRENEFRNIAIEL+RRFQ E+GELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK K A NE SA
Subjt:  IVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA

Q0IDZ5 Translation initiation factor IF-37.8e-3044.2Show/hide
Query:  IKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKK
        I    +R++DA    +GV+ + QA+++A + ELDLV+VS  ADPPV RIMDY K+++E +KK +  +KKS  T  ++KE+KM Y IDQHDY VR+  A++
Subjt:  IKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKK

Query:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRD-RNIFIVLVPNKAVLQKAQEPPKKKDKPAVNE
        FLK GDKVK  V  +GRE +   +A  L+RR  +++ E A  +    R+ RN+ + L P KA L K     K KD+  VN+
Subjt:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRD-RNIFIVLVPNKAVLQKAQEPPKKKDKPAVNE

Q8R9C2 Translation initiation factor IF-37.8e-3042.86Show/hide
Query:  IKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKK
        I+   VRLID     +G++S  +A ++A++  LDLV + P+A+PPV ++MD+ KYRYEL K+++  +KK     +++KE++M  NI+ HD+ V+LK+A K
Subjt:  IKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKK

Query:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK
        FLKDGDKVKV +  +GRE    ++A +L++RF EE+ E    E+A +   RN+ +V+ P K
Subjt:  FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK

Q94B52 Translation initiation factor IF3-4, chloroplastic8.5e-7772.99Show/hide
Query:  GGASRSSGP--PDSKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAAT
        GG SR  G      K S D+  LDISAI+S  VRLID  QNM+G+VSK +A++ AEDAELDLV++SPDADPPVVR+MDY+KYRYE QK+K+ QQKK+  T
Subjt:  GGASRSSGP--PDSKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAAT

Query:  RMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKK
        RMDLKELKMGYNIDQHDYSVR++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIVLVPNK V++K QE PPKK
Subjt:  RMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKK

Query:  KDKPAVNEVSA
        K KPA ++VSA
Subjt:  KDKPAVNEVSA

Arabidopsis top hitse value%identityAlignment
AT1G34360.1 translation initiation factor 3 (IF-3) family protein1.1e-0730.89Show/hide
Query:  DSKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMG
        D  R N++I  D        VRL+    +   VVS  +A++ A++ + DLV V  DA PPV +I+ Y+   Y+  K  K+R + K++ A R D+KE++  
Subjt:  DSKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMG

Query:  YNIDQHDYSVRLKAAKKFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKK
          I+  D   +   A K ++ G +VK + V  K +  E      +EL+ RF   +G+ A  E+    DR   +V+V +         PPKK
Subjt:  YNIDQHDYSVRLKAAKKFLKDGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKK

AT2G24060.1 Translation initiation factor 3 protein5.3e-7460.22Show/hide
Query:  SSSTTPFRTSFPSLPISSSNSNAF-------KFRLHKSN-SLRLLFSSPIR----TSVFARLGGASRSSGPPDSKRSND---EIGLDISAIKSTNVRLID
        +SST  F   F  +  + S+ + F         RL K+  S   L  SP R    T  F   GG  R SG     R  +   +  LDIS+I+S  VRLID
Subjt:  SSSTTPFRTSFPSLPISSSNSNAF-------KFRLHKSN-SLRLLFSSPIR----TSVFARLGGASRSSGPPDSKRSND---EIGLDISAIKSTNVRLID

Query:  AAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKV
          QNM+G+VSK +A++MA+DAELDLV++SPDADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSVRL+AA+KFL+DGDKVKV
Subjt:  AAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKV

Query:  IVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA
        IV++KGRENEFRNIAIEL+RRFQ E+GELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK K A NE SA
Subjt:  IVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA

AT4G30690.1 Translation initiation factor 3 protein6.1e-7872.99Show/hide
Query:  GGASRSSGP--PDSKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAAT
        GG SR  G      K S D+  LDISAI+S  VRLID  QNM+G+VSK +A++ AEDAELDLV++SPDADPPVVR+MDY+KYRYE QK+K+ QQKK+  T
Subjt:  GGASRSSGP--PDSKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAAT

Query:  RMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKK
        RMDLKELKMGYNIDQHDYSVR++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIVLVPNK V++K QE PPKK
Subjt:  RMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKK

Query:  KDKPAVNEVSA
        K KPA ++VSA
Subjt:  KDKPAVNEVSA

AT4G30690.2 Translation initiation factor 3 protein6.1e-6262.09Show/hide
Query:  GGASRSSGP--PDSKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAAT
        GG SR  G      K S D+  LDISAI+S  VRLID  QNM+G+VSK +A++ AEDAELDLV++SPDADPPVVR+MDY+                    
Subjt:  GGASRSSGP--PDSKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAAT

Query:  RMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKK
                  YNIDQHDYSVR++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIVLVPNK V++K QE PPKK
Subjt:  RMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKK

Query:  KDKPAVNEVSA
        K KPA ++VSA
Subjt:  KDKPAVNEVSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGCTCTCCGGCAGTTTCCCTTTCAAATCTCTCTTATCCCAATCCTCCGCCGCTGCCACCACCACCACCTCCTCCGCCCCACCTGCCGCTACCTCCTCCTCTTC
CACTACTCCCTTCCGAACCTCATTCCCCTCTCTTCCCATCTCCTCCTCTAATTCCAATGCCTTCAAATTCCGCCTTCACAAATCCAACTCTCTACGTCTCCTCTTTTCCT
CTCCTATTCGTACTTCTGTATTCGCTCGACTCGGCGGCGCTTCTCGATCTTCCGGACCGCCTGATTCTAAGCGCTCTAACGATGAAATTGGTCTCGATATTTCCGCCATC
AAGTCAACTAATGTGAGGCTTATCGATGCTGCTCAGAATATGGTTGGAGTTGTGTCGAAGGCCCAAGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTTGTAGT
ATCTCCTGATGCAGATCCTCCAGTTGTTAGAATAATGGATTACAATAAATATAGGTATGAACTGCAAAAAAAGAAAAGAGGACAACAGAAGAAAAGTGCTGCAACTCGCA
TGGATTTGAAAGAGCTTAAAATGGGTTATAACATCGACCAACATGATTACTCTGTCCGTTTGAAAGCTGCAAAGAAATTTTTAAAAGACGGAGACAAGGTTAAAGTTATA
GTGAACCTGAAAGGTCGTGAAAATGAGTTCAGAAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAAGTTGGGGAGCTTGCAACTGAAGAGGCCAAAAACTTCAG
AGACAGGAATATATTTATTGTTCTAGTCCCTAACAAGGCTGTTCTTCAAAAGGCCCAAGAACCTCCCAAGAAAAAAGATAAACCTGCAGTTAATGAAGTTTCTGCCGGTG
TTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGGCTCTCCGGCAGTTTCCCTTTCAAATCTCTCTTATCCCAATCCTCCGCCGCTGCCACCACCACCACCTCCTCCGCCCCACCTGCCGCTACCTCCTCCTCTTC
CACTACTCCCTTCCGAACCTCATTCCCCTCTCTTCCCATCTCCTCCTCTAATTCCAATGCCTTCAAATTCCGCCTTCACAAATCCAACTCTCTACGTCTCCTCTTTTCCT
CTCCTATTCGTACTTCTGTATTCGCTCGACTCGGCGGCGCTTCTCGATCTTCCGGACCGCCTGATTCTAAGCGCTCTAACGATGAAATTGGTCTCGATATTTCCGCCATC
AAGTCAACTAATGTGAGGCTTATCGATGCTGCTCAGAATATGGTTGGAGTTGTGTCGAAGGCCCAAGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTTGTAGT
ATCTCCTGATGCAGATCCTCCAGTTGTTAGAATAATGGATTACAATAAATATAGGTATGAACTGCAAAAAAAGAAAAGAGGACAACAGAAGAAAAGTGCTGCAACTCGCA
TGGATTTGAAAGAGCTTAAAATGGGTTATAACATCGACCAACATGATTACTCTGTCCGTTTGAAAGCTGCAAAGAAATTTTTAAAAGACGGAGACAAGGTTAAAGTTATA
GTGAACCTGAAAGGTCGTGAAAATGAGTTCAGAAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAAGTTGGGGAGCTTGCAACTGAAGAGGCCAAAAACTTCAG
AGACAGGAATATATTTATTGTTCTAGTCCCTAACAAGGCTGTTCTTCAAAAGGCCCAAGAACCTCCCAAGAAAAAAGATAAACCTGCAGTTAATGAAGTTTCTGCCGGTG
TTTAA
Protein sequenceShow/hide protein sequence
MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPIRTSVFARLGGASRSSGPPDSKRSNDEIGLDISAI
KSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVI
VNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV